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BML_coassembly_scaffold_13_prodigal-single.1__X__X__00225
Bact-VirBML_coassembly_scaffold_13_prodigal-single.1__X__X__00225
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 487-547
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5anpA00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.70 | 59.0 | 4.50e-01 | 95.1% | 41.4% |
| 4oa3A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.70 | 59.0 | 4.53e-01 | 95.1% | 42.6% |
| 2kw7A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.68 | 57.0 | 4.26e-01 | 95.1% | 38.9% |
| 2cs0A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 46.0 | 4.04e-01 | 93.4% | 47.4% |
| 8d3mI01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.66 | 58.0 | 4.04e-01 | 100.0% | 34.3% |
| 7oo1A02 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.66 | 52.0 | 4.21e-01 | 86.9% | 86.4% |
| 2fm7A00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.66 | 45.0 | 4.55e-01 | 72.1% | 75.8% |
| 4rwzA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 56.0 | 3.94e-01 | 96.7% | 87.2% |
| 7mi4A01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.65 | 54.0 | 3.86e-01 | 95.1% | 32.8% |
| 3ptjA00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.65 | 53.0 | 4.06e-01 | 93.4% | 39.9% |
| 3iuwA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.64 | 57.0 | 5.23e-01 | 100.0% | 96.2% |
| 1qlmA02 | 3.30.1030.10 | Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 | 0.64 | 53.0 | 3.69e-01 | 91.8% | 47.5% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 48.0 | 4.24e-01 | 83.6% | 68.4% |
| 3mtiB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 54.0 | 3.84e-01 | 95.1% | 88.3% |
| 3evzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 52.0 | 3.85e-01 | 95.1% | 89.8% |
| 1r5tA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.62 | 54.0 | 4.19e-01 | 100.0% | 66.0% |
| 5bxyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 56.0 | 4.12e-01 | 100.0% | 84.4% |
| 3ijmA00 | 3.90.1570.20 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.60 | 50.0 | 3.86e-01 | 100.0% | 39.7% |
| 2p35A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 50.0 | 3.63e-01 | 93.4% | 84.5% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.60 | 49.0 | 3.53e-01 | 98.4% | 29.6% |
| 3weeB03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.60 | 42.0 | 3.44e-01 | 75.4% | 78.3% |
| 3q9oA03 | 3.90.175.10 | Alpha Beta › Alpha-Beta Complex › Diphtheria Toxin; domain 1 › Diphtheria Toxin, domain 1 | 0.59 | 46.0 | 3.17e-01 | 95.1% | 24.8% |
| 3jzjA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 41.0 | 2.94e-01 | 78.7% | 23.4% |
| 1m6yA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 49.0 | 3.50e-01 | 93.4% | 90.1% |
| 3iabB01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.58 | 45.0 | 3.90e-01 | 85.2% | 94.9% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.58 | 47.0 | 3.52e-01 | 95.1% | 47.7% |
| 2xi5A00 | 3.40.91.60 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.58 | 44.0 | 3.27e-01 | 88.5% | 46.7% |
| 3umoA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 48.0 | 3.11e-01 | 100.0% | 26.5% |
| 1s14B00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.56 | 46.0 | 3.48e-01 | 100.0% | 52.2% |
| 3qyfA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.56 | 45.0 | 3.43e-01 | 95.1% | 44.8% |
| 4zciA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 42.0 | 3.17e-01 | 86.9% | 42.0% |
| 5dynA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 45.0 | 3.94e-01 | 100.0% | 61.3% |
| 1td6A02 | 3.30.1790.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein mp506/mpn330, domain 2 › hypothetical protein mp506/mpn330, domain 2 | 0.55 | 46.0 | 4.13e-01 | 98.4% | 66.3% |
| 3h09A04 | 4.10.1240.40 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.55 | 43.0 | 4.13e-01 | 90.2% | 91.7% |
| 2i5qA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.55 | 43.0 | 2.96e-01 | 90.2% | 28.6% |
| 3cwvA01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 46.0 | 3.32e-01 | 100.0% | 35.9% |
| 4s1hA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 44.0 | 2.98e-01 | 100.0% | 60.6% |
| 5yd0D01 | 3.30.950.30 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Schlafen, AAA domain | 0.54 | 42.0 | 3.33e-01 | 93.4% | 86.4% |
| 7xlqD02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.54 | 45.0 | 3.29e-01 | 100.0% | 35.3% |
| 1fcqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 44.0 | 2.90e-01 | 100.0% | 43.0% |
| 2ph7A02 | 3.40.50.10670 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › af2093 domain | 0.53 | 42.0 | 3.72e-01 | 91.8% | 59.4% |
| 3qkwB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 42.0 | 3.19e-01 | 96.7% | 52.9% |
| 4wjmA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 46.0 | 2.93e-01 | 100.0% | 26.9% |
| 4xvcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 42.0 | 2.78e-01 | 100.0% | 31.6% |
| 1ck7A01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.50 | 41.0 | 2.87e-01 | 96.7% | 48.9% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1007200 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.73 | 60.0 | 4.56e-01 | 95.1% | 38.6% |
| 4522026 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.72 | 50.0 | 4.90e-01 | 85.2% | 67.7% |
| 3989407 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.71 | 50.0 | 4.92e-01 | 86.9% | 69.2% |
| 3219762 | 3105.1.1.0 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related | 0.71 | 63.0 | 4.59e-01 | 100.0% | 40.6% |
| 3992999 | 3105.1.1.4 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 | 0.71 | 59.0 | 4.23e-01 | 95.1% | 45.3% |
| 3971681 | 3105.1.1.0 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related | 0.71 | 60.0 | 4.64e-01 | 95.1% | 45.9% |
| 4122042 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.71 | 59.0 | 4.53e-01 | 95.1% | 41.5% |
| 3594483 | 3105.1.1.0 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related | 0.71 | 60.0 | 4.60e-01 | 95.1% | 42.9% |
| 5057950 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.70 | 60.0 | 4.58e-01 | 95.1% | 46.4% |
| 1918559 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.70 | 59.0 | 4.50e-01 | 95.1% | 41.4% |
| 3610566 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.70 | 59.0 | 4.50e-01 | 95.1% | 41.4% |
| 5012331 | 7518.1.1.7 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › DacZ_T | 0.70 | 56.0 | 4.76e-01 | 88.5% | 86.0% |
| 4026764 | 3105.1.1.4 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 | 0.69 | 58.0 | 4.28e-01 | 95.1% | 36.9% |
| 3293552 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.68 | 54.0 | 4.09e-01 | 88.5% | 77.8% |
| 5037760 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.68 | 60.0 | 4.59e-01 | 100.0% | 82.8% |
| 4611006 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.68 | 50.0 | 4.81e-01 | 93.4% | 69.6% |
| 119247 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.68 | 57.0 | 4.26e-01 | 95.1% | 38.9% |
| 3930915 | 3105.1.1.4 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 | 0.68 | 60.0 | 4.37e-01 | 100.0% | 43.6% |
| 5063524 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.67 | 57.0 | 4.19e-01 | 96.7% | 51.2% |
| 3036116 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.67 | 52.0 | 4.06e-01 | 85.2% | 76.1% |
| 3964058 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.67 | 56.0 | 4.29e-01 | 93.4% | 41.4% |
| 5021943 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.66 | 54.0 | 3.67e-01 | 93.4% | 26.7% |
| 5038834 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.66 | 58.0 | 4.45e-01 | 98.4% | 43.5% |
| 5076203 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.66 | 55.0 | 3.90e-01 | 95.1% | 32.8% |
| 3403121 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 46.0 | 3.23e-01 | 91.8% | 23.7% |
| 4000255 | 3105.1.1.4 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 | 0.66 | 55.0 | 3.86e-01 | 95.1% | 33.0% |
| 1517806 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.65 | 51.0 | 4.07e-01 | 86.9% | 75.6% |
| 4284406 | 2008.1.1.13 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecU | 0.65 | 58.0 | 4.24e-01 | 98.4% | 44.4% |
| 4048956 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.65 | 53.0 | 3.88e-01 | 93.4% | 33.7% |
| 2798007 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.65 | 54.0 | 3.84e-01 | 95.1% | 32.3% |
| None | — | 0.65 | 54.0 | 3.96e-01 | 95.1% | 37.7% | |
| 4837526 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.65 | 53.0 | 4.10e-01 | 93.4% | 43.0% |
| 3575308 | 3105.1.1.4 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 | 0.65 | 54.0 | 3.94e-01 | 95.1% | 37.7% |
| 4927354 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.65 | 56.0 | 4.70e-01 | 98.4% | 56.7% |
| 3968676 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.64 | 51.0 | 4.21e-01 | 96.7% | 47.0% |
| 4360838 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.64 | 51.0 | 4.08e-01 | 90.2% | 80.0% |
| 3590787 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.64 | 49.0 | 4.63e-01 | 93.4% | 68.9% |
| 3477642 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.64 | 48.0 | 3.91e-01 | 98.4% | 41.7% |
| 4933945 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.64 | 55.0 | 3.82e-01 | 100.0% | 31.6% |
| 5083419 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.63 | 51.0 | 4.25e-01 | 95.1% | 85.8% |
| 5000157 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.63 | 53.0 | 3.75e-01 | 95.1% | 32.0% |
| 4955488 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 53.0 | 4.47e-01 | 98.4% | 57.3% |
| 5082574 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.63 | 53.0 | 4.02e-01 | 98.4% | 39.4% |
| 3992384 | 2008.1.1.29 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 | 0.63 | 52.0 | 3.60e-01 | 95.1% | 28.2% |
| 3216932 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 55.0 | 3.49e-01 | 100.0% | 74.7% |
| 4933955 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.62 | 50.0 | 3.69e-01 | 96.7% | 35.3% |
| 4029153 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 49.0 | 2.82e-01 | 91.8% | 8.6% |
| 4177319 | 3585.1.1.1 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C | 0.62 | 49.0 | 4.46e-01 | 100.0% | 63.5% |
| 4946846 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.62 | 52.0 | 3.89e-01 | 98.4% | 38.8% |
| 3600085 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.62 | 39.0 | 3.24e-01 | 93.4% | 36.4% |
| 3679680 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.61 | 51.0 | 4.28e-01 | 98.4% | 65.2% |
| 4947751 | 869.1.1.1 ↗ | a+b complex topology › Methenyltetrahydromethanopterin cyclohydrolase › Methenyltetrahydromethanopterin cyclohydrolase › Methenyltetrahydromethanopterin cyclohydrolase › MCH | 0.61 | 50.0 | 3.20e-01 | 91.8% | 25.5% |
| 4477608 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.60 | 49.0 | 3.49e-01 | 95.1% | 29.2% |
| 4937449 | 321.1.1.4 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N | 0.58 | 45.0 | 2.98e-01 | 88.5% | 69.7% |
| 402316 | 2008.1.1.65 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › L_protein_N | 0.58 | 44.0 | 3.28e-01 | 88.5% | 47.0% |
| 4324924 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 42.0 | 3.17e-01 | 80.3% | 33.3% |
| 4932718 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.57 | 48.0 | 3.81e-01 | 95.1% | 63.1% |
| 3604185 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 40.0 | 2.91e-01 | 78.7% | 75.6% |
| 4211664 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 49.0 | 3.13e-01 | 100.0% | 25.8% |
| 3187815 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 46.0 | 2.94e-01 | 100.0% | 23.9% |
| 3717721 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.54 | 45.0 | 3.09e-01 | 100.0% | 35.1% |
| 5053585 | 869.1.1.1 ↗ | a+b complex topology › Methenyltetrahydromethanopterin cyclohydrolase › Methenyltetrahydromethanopterin cyclohydrolase › Methenyltetrahydromethanopterin cyclohydrolase › MCH | 0.54 | 38.0 | 2.45e-01 | 78.7% | 13.8% |
| 4401609 | 2003.1.10.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Dala_Dala_lig_N | 0.54 | 43.0 | 3.42e-01 | 100.0% | 41.5% |
| 3550568 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.54 | 45.0 | 3.12e-01 | 100.0% | 28.5% |
| 4060492 | 321.1.1.4 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N | 0.53 | 44.0 | 2.90e-01 | 100.0% | 68.0% |
| 3606824 | 328.8.1.0 ↗ | a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 | 0.53 | 41.0 | 3.32e-01 | 91.8% | 92.1% |
| 5010105 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.53 | 43.0 | 3.57e-01 | 98.4% | 52.0% |
| 5075568 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.53 | 46.0 | 2.91e-01 | 100.0% | 22.7% |
| 3401691 | 321.1.1.4 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N | 0.53 | 40.0 | 2.73e-01 | 93.4% | 68.9% |
| 4099566 | 321.1.1.4 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N | 0.53 | 43.0 | 2.82e-01 | 100.0% | 70.3% |
| 4946989 | 321.1.1.4 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N | 0.52 | 43.0 | 2.87e-01 | 100.0% | 69.3% |
| 3250585 | 109.4.1.791 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_17 | 0.51 | 44.0 | 2.59e-01 | 98.4% | 16.2% |
| 4379983 | 2003.1.10.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Dala_Dala_lig_N | 0.51 | 38.0 | 3.59e-01 | 93.4% | 65.0% |
| 4097523 | 321.1.1.4 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N | 0.51 | 39.0 | 2.69e-01 | 93.4% | 69.3% |
| 3254583 | 321.1.1.4 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N | 0.51 | 42.0 | 2.77e-01 | 100.0% | 66.3% |
| 3272818 | 2004.1.1.47 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › G-alpha | 0.51 | 42.0 | 3.03e-01 | 98.4% | 53.6% |
| 3612692 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.51 | 41.0 | 2.89e-01 | 93.4% | 28.0% |
| 3682777 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.50 | 40.0 | 3.09e-01 | 95.1% | 47.3% |
D2
medium
residues 131-196
Domain cluster:
rep: Salt_Pond_R2_restored_H2O_MG_scaffold_1_prodigal-single.1__X__X__00208__D140-203
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k8iA01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.71 | 47.0 | 4.53e-01 | 98.5% | 58.4% |
| 7zqiA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.68 | 49.0 | 3.55e-01 | 98.5% | 28.1% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 42.0 | 3.77e-01 | 87.9% | 44.6% |
| 4d8pB01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.66 | 48.0 | 4.13e-01 | 100.0% | 50.0% |
| 5cmlA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.66 | 55.0 | 3.73e-01 | 92.4% | 98.3% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 52.0 | 4.09e-01 | 90.9% | 82.3% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 36.0 | 3.81e-01 | 80.3% | 61.4% |
| 2hdwA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 53.0 | 3.67e-01 | 92.4% | 91.7% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.64 | 50.0 | 4.05e-01 | 89.4% | 98.6% |
| 4ffeX00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.63 | 42.0 | 3.22e-01 | 98.5% | 30.0% |
| 5ay6A01 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.63 | 43.0 | 3.21e-01 | 71.2% | 84.2% |
| 2xe4A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 52.0 | 3.27e-01 | 93.9% | 72.4% |
| 1a6zA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.62 | 45.0 | 3.29e-01 | 100.0% | 28.5% |
| 1e3dB00 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.61 | 50.0 | 2.99e-01 | 93.9% | 94.2% |
| 2ovsA00 | 2.40.128.380 | Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR | 0.60 | 46.0 | 3.83e-01 | 83.3% | 47.5% |
| 3bwxA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 48.0 | 3.20e-01 | 90.9% | 42.5% |
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 41.0 | 3.43e-01 | 89.4% | 41.2% |
| 1pqzA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.59 | 41.0 | 3.27e-01 | 100.0% | 35.8% |
| 1zt4C01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.58 | 42.0 | 3.11e-01 | 100.0% | 28.5% |
| 1mrzB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.57 | 44.0 | 3.73e-01 | 84.8% | 62.5% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 45.0 | 2.76e-01 | 89.4% | 44.2% |
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 39.0 | 3.76e-01 | 100.0% | 68.4% |
| 1hyrC01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.53 | 47.0 | 3.44e-01 | 100.0% | 69.4% |
| 4obiA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.52 | 37.0 | 3.48e-01 | 93.9% | 58.6% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 37.0 | 3.48e-01 | 93.9% | 60.7% |
| 1ys5A01 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 42.0 | 3.40e-01 | 93.9% | 56.0% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 39.0 | 3.19e-01 | 81.8% | 56.7% |
| 3h5kA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.51 | 45.0 | 3.32e-01 | 100.0% | 52.0% |
| 4za3A01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.51 | 43.0 | 3.32e-01 | 98.5% | 52.1% |
| 3l9rA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 45.0 | 3.32e-01 | 100.0% | 70.9% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.50 | 43.0 | 3.15e-01 | 97.0% | 70.7% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4961749 | 1001.1.1.1 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 | 0.70 | 48.0 | 4.84e-01 | 71.2% | 81.5% |
| 3230224 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.67 | 45.0 | 3.33e-01 | 97.0% | 27.4% |
| 3979027 | 1001.1.1.1 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 | 0.67 | 49.0 | 4.69e-01 | 77.3% | 85.3% |
| 3921418 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.66 | 45.0 | 4.18e-01 | 98.5% | 55.3% |
| 3842370 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.65 | 45.0 | 3.32e-01 | 98.5% | 27.4% |
| 5002621 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 45.0 | 3.05e-01 | 75.8% | 83.8% |
| 3596153 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 41.0 | 3.52e-01 | 92.4% | 40.7% |
| 150881 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.63 | 42.0 | 3.22e-01 | 98.5% | 30.0% |
| 4836497 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.63 | 42.0 | 3.08e-01 | 98.5% | 25.1% |
| 4969029 | 1001.1.1.0 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 | 0.62 | 53.0 | 5.39e-01 | 93.9% | 93.8% |
| 142797 | 233.1.1.6 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_3 | 0.61 | 42.0 | 3.07e-01 | 98.5% | 26.4% |
| 3417872 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.60 | 43.0 | 3.71e-01 | 77.3% | 61.9% |
| 4014835 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.58 | 46.0 | 2.97e-01 | 90.9% | 95.9% |
| 3386201 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.58 | 47.0 | 3.58e-01 | 92.4% | 85.9% |
| 5018079 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 45.0 | 3.69e-01 | 86.4% | 70.4% |
| 4258908 | 4998.1.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 | 0.58 | 44.0 | 3.51e-01 | 83.3% | 65.7% |
| 1292509 | 220.1.1.47 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 | 0.57 | 42.0 | 3.55e-01 | 92.4% | 44.5% |
| 4218076 | 1001.1.1.0 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 | 0.56 | 45.0 | 4.28e-01 | 87.9% | 76.2% |
| 3169953 | 2484.5.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase | 0.56 | 40.0 | 3.08e-01 | 77.3% | 94.5% |
| 3383442 | 5.1.4.151 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BCAS3_WD40 | 0.56 | 45.0 | 2.68e-01 | 87.9% | 98.3% |
| 4101190 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 40.0 | 3.91e-01 | 92.4% | 68.0% |
| 3689391 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.55 | 44.0 | 3.50e-01 | 87.9% | 69.6% |
| 3934135 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 39.0 | 3.17e-01 | 74.2% | 99.2% |
| 4680916 | 4998.1.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 | 0.55 | 42.0 | 3.48e-01 | 86.4% | 63.1% |
| 4680220 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.55 | 47.0 | 3.40e-01 | 95.5% | 64.9% |
| 3726946 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.54 | 38.0 | 3.30e-01 | 92.4% | 44.3% |
| 4121521 | 2498.1.1.12 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M4,Peptidase_M4_C | 0.54 | 42.0 | 2.70e-01 | 86.4% | 30.0% |
| 5011768 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.54 | 41.0 | 3.58e-01 | 97.0% | 53.3% |
| 4106397 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 39.0 | 3.77e-01 | 93.9% | 69.3% |
| 4368436 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.53 | 43.0 | 2.92e-01 | 98.5% | 85.1% |
| 3489562 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.52 | 41.0 | 2.59e-01 | 89.4% | 51.1% |
| None | — | 0.52 | 44.0 | 2.62e-01 | 93.9% | 96.0% | |
| 4675181 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 43.0 | 3.90e-01 | 93.9% | 83.2% |
| 3544243 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 42.0 | 3.58e-01 | 87.9% | 98.1% |
| 4943422 | 246.1.1.2 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › NAD_synthase | 0.52 | 45.0 | 3.02e-01 | 100.0% | 44.1% |
| 3473974 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.51 | 42.0 | 3.30e-01 | 92.4% | 82.1% |
| 4014180 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.51 | 40.0 | 3.41e-01 | 90.9% | 75.0% |
| 4478350 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.51 | 42.0 | 3.48e-01 | 92.4% | 92.5% |
| 3518268 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 44.0 | 3.54e-01 | 98.5% | 55.6% |
| 3880275 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.51 | 42.0 | 2.92e-01 | 92.4% | 53.3% |
| 3871828 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 40.0 | 3.48e-01 | 92.4% | 89.6% |
| 3181514 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.50 | 40.0 | 3.31e-01 | 90.9% | 70.8% |
| 3864913 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.50 | 41.0 | 3.19e-01 | 92.4% | 87.7% |
| 4927783 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.50 | 41.0 | 3.43e-01 | 92.4% | 92.5% |
| 3649062 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.50 | 41.0 | 3.17e-01 | 92.4% | 92.3% |
D3
medium
residues 351-409
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gw6F01 | 4.10.1090.10 | Few Secondary Structures › Irregular › Endosialidase, domain 4 › Endosialidase, domain 4 | 0.57 | 48.0 | 4.27e-01 | 100.0% | 83.9% |
| 3ju4A04 | 4.10.1090.10 | Few Secondary Structures › Irregular › Endosialidase, domain 4 › Endosialidase, domain 4 | 0.57 | 47.0 | 3.64e-01 | 100.0% | 54.5% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 42.0 | 2.65e-01 | 98.3% | 45.1% |
| 2lydA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 36.0 | 2.86e-01 | 74.6% | 79.9% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 41.0 | 2.68e-01 | 98.3% | 44.1% |
| 1jofA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 39.0 | 2.60e-01 | 100.0% | 38.9% |
| 3qr8A02 | 6.20.150.10 | Special › Other non-globular › Chondroitinase Ac; Chain A, domain 3 › | 0.50 | 42.0 | 3.96e-01 | 96.6% | 86.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937333 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.60 | 43.0 | 3.93e-01 | 84.7% | 56.2% |
| 4030445 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 39.0 | 2.45e-01 | 76.3% | 36.6% |
| 3932880 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 42.0 | 2.76e-01 | 88.1% | 96.6% |
| 3699171 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 45.0 | 2.80e-01 | 96.6% | 83.4% |
| 3831169 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.53 | 40.0 | 2.75e-01 | 89.8% | 66.5% |
| 2085330 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.52 | 39.0 | 2.97e-01 | 84.7% | 89.9% |
| 3981434 | 79.1.1.15 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Apex | 0.51 | 42.0 | 3.59e-01 | 94.9% | 61.0% |
| 3829068 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.51 | 36.0 | 2.52e-01 | 78.0% | 26.1% |
| 3887265 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 40.0 | 2.55e-01 | 91.5% | 84.1% |
| 3946712 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.51 | 42.0 | 3.87e-01 | 96.6% | 76.2% |
| 3706766 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 40.0 | 2.67e-01 | 94.9% | 90.0% |