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BML_coassembly_scaffold_13_prodigal-single.1__X__X__00330
Bact-VirBML_coassembly_scaffold_13_prodigal-single.1__X__X__00330
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-86
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17780.7 best | OCRE | 25.4 | 1.60e-05 | 40.7% | 59.6% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yw5A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.56 | 30.0 | 3.44e-01 | 75.6% | 69.8% |
| 2ghsA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 41.0 | 2.94e-01 | 82.6% | 75.3% |
| 1shyB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 43.0 | 2.84e-01 | 91.9% | 88.2% |
| 1d0qA00 | 3.90.580.10 | Alpha Beta › Alpha-Beta Complex › DNA Primase; Chain A › Zinc finger, CHC2-type domain | 0.51 | 41.0 | 3.90e-01 | 94.2% | 73.5% |
| 1ekgA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.51 | 38.0 | 3.44e-01 | 80.2% | 76.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3928378 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 38.0 | 3.90e-01 | 74.4% | 69.4% |
| 3617714 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.55 | 33.0 | 3.55e-01 | 74.4% | 69.3% |
| 3274279 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 43.0 | 4.41e-01 | 90.7% | 88.2% |
| 3860784 | 376.1.6.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR_1 | 0.54 | 38.0 | 4.23e-01 | 73.3% | 100.0% |
| 3620042 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.54 | 43.0 | 4.40e-01 | 96.5% | 91.6% |
| 4023805 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 38.0 | 3.91e-01 | 76.7% | 82.4% |
| 4260807 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 36.0 | 3.97e-01 | 72.1% | 88.6% |
| 5004274 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.52 | 33.0 | 3.50e-01 | 75.6% | 73.3% |
| 3704287 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.51 | 32.0 | 3.63e-01 | 72.1% | 84.6% |
| 3843142 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.51 | 37.0 | 3.21e-01 | 76.7% | 71.9% |
| 3412674 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 39.0 | 3.94e-01 | 84.9% | 85.6% |