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BML_coassembly_scaffold_13_prodigal-single.1__X__X__00357
Bact-VirBML_coassembly_scaffold_13_prodigal-single.1__X__X__00357
Identity
- Kingdom:
- phage
Quality
88.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-48
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mh3A00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.76 | 55.0 | 4.87e-01 | 100.0% | 52.9% |
| 5vntA00 | 1.10.950.10 | Mainly Alpha › Orthogonal Bundle › Villin Headpiece Domain; Chain A › Villin headpiece domain | 0.68 | 54.0 | 4.98e-01 | 93.5% | 68.3% |
| 1qzpA00 | 1.10.950.10 | Mainly Alpha › Orthogonal Bundle › Villin Headpiece Domain; Chain A › Villin headpiece domain | 0.67 | 52.0 | 4.73e-01 | 91.3% | 63.2% |
| 3ephA02 | 1.10.20.140 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.65 | 45.0 | 3.92e-01 | 100.0% | 47.2% |
| 6mfvC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 48.0 | 3.54e-01 | 100.0% | 29.1% |
| 1on2A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.61 | 50.0 | 4.63e-01 | 95.7% | 73.0% |
| 2dsjA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.61 | 41.0 | 3.70e-01 | 73.9% | 49.3% |
| 1dk5A04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.59 | 44.0 | 3.86e-01 | 82.6% | 55.7% |
| 1vpuA00 | 1.10.195.10 | Mainly Alpha › Orthogonal Bundle › Cytoplasmic domain of VPU protein › HIV-1 VPU cytoplasmic domain | 0.57 | 43.0 | 4.39e-01 | 100.0% | 95.6% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 45.0 | 4.14e-01 | 100.0% | 82.1% |
| 2jscB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 3.24e-01 | 73.9% | 55.0% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 46.0 | 2.99e-01 | 100.0% | 55.8% |
| 4qlxB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.51 | 45.0 | 2.91e-01 | 100.0% | 25.7% |
| 5lo9A01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.51 | 40.0 | 3.30e-01 | 100.0% | 47.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3226766 | 105.1.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain | 0.74 | 55.0 | 5.11e-01 | 100.0% | 63.3% |
| 3259174 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.70 | 58.0 | 4.61e-01 | 100.0% | 99.0% |
| 4963278 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.65 | 51.0 | 4.86e-01 | 100.0% | 83.3% |
| 4588079 | 3317.1.1.0 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain | 0.53 | 42.0 | 4.00e-01 | 97.8% | 75.0% |
| 4995789 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 37.0 | 3.93e-01 | 89.1% | 85.0% |
| 3829000 | 3161.1.1.1 ↗ | alpha duplicates or obligate multimers › LOB domain › LOB domain › LOB domain › LOB | 0.52 | 45.0 | 3.89e-01 | 100.0% | 90.7% |