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BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00275

Bact-Vir

BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00275

Identity

Kingdom:
phage

Quality

89.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 282-379
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19062.6 best DUF5758 79.9 1.80e-22 98.0% 89.5%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.59 37.0 3.62e-01 99.0% 56.2%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 29.0 3.38e-01 94.9% 70.6%
2vrsA03 2.60.90.40 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.52 39.0 3.63e-01 82.7% 92.4%
5yl6A01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.51 36.0 2.98e-01 90.8% 40.3%
1y9qA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 33.0 3.40e-01 94.9% 68.8%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 34.0 3.56e-01 94.9% 76.1%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.50 35.0 3.53e-01 75.5% 71.7%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5050188 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 35.0 3.63e-01 93.9% 68.9%
3283603 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 36.0 3.82e-01 98.0% 87.1%