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BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00275
Bact-VirBML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00275
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 282-379
Domain cluster:
rep: hypothetical_protein_H012_gp865__YP_007354037__Acanthamoeba_polyphaga_moumouvirus__1269028__D16-139
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19062.6 best | DUF5758 | 79.9 | 1.80e-22 | 98.0% | 89.5% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c0fC00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.59 | 37.0 | 3.62e-01 | 99.0% | 56.2% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 29.0 | 3.38e-01 | 94.9% | 70.6% |
| 2vrsA03 | 2.60.90.40 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.52 | 39.0 | 3.63e-01 | 82.7% | 92.4% |
| 5yl6A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.51 | 36.0 | 2.98e-01 | 90.8% | 40.3% |
| 1y9qA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 33.0 | 3.40e-01 | 94.9% | 68.8% |
| 2q30A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 34.0 | 3.56e-01 | 94.9% | 76.1% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.50 | 35.0 | 3.53e-01 | 75.5% | 71.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5050188 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 35.0 | 3.63e-01 | 93.9% | 68.9% |
| 3283603 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 36.0 | 3.82e-01 | 98.0% | 87.1% |