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BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00290
Bact-VirBML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00290
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-98
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00223__D15-95
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 43.0 | 4.39e-01 | 100.0% | 79.3% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.57 | 33.0 | 4.00e-01 | 85.9% | 91.2% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 3.89e-01 | 98.9% | 66.8% |
| 7c38B01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.55 | 44.0 | 3.08e-01 | 88.0% | 90.2% |
| 5yy8A00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.55 | 45.0 | 3.27e-01 | 91.3% | 92.6% |
| 4nwyA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 45.0 | 4.00e-01 | 88.0% | 91.4% |
| 4a0tA01 | 6.20.80.10 | Special › Other non-globular › Glycosyl hydrolase fold › | 0.54 | 33.0 | 3.86e-01 | 87.0% | 91.8% |
| 4jpqA00 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 45.0 | 3.55e-01 | 97.8% | 90.4% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.54 | 36.0 | 3.28e-01 | 96.7% | 48.9% |
| 3kyfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 39.0 | 3.69e-01 | 98.9% | 63.2% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 33.0 | 3.56e-01 | 100.0% | 78.1% |
| 1ljoA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.98e-01 | 98.9% | 90.7% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.52 | 40.0 | 2.77e-01 | 84.8% | 99.1% |
| 1sjgA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.52 | 43.0 | 4.04e-01 | 90.2% | 90.2% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 31.0 | 3.51e-01 | 92.4% | 85.7% |
| 1smpI00 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 41.0 | 4.06e-01 | 93.5% | 96.0% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 35.0 | 3.24e-01 | 97.8% | 53.6% |
| 3f1sA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.50 | 37.0 | 3.10e-01 | 76.1% | 93.3% |
| 5wceA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.50 | 34.0 | 3.23e-01 | 71.7% | 86.6% |
| 2rm4A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 33.0 | 3.71e-01 | 93.5% | 93.9% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.50 | 28.0 | 3.40e-01 | 83.7% | 94.2% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 31.0 | 3.63e-01 | 98.9% | 96.6% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595871 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.63 | 44.0 | 3.03e-01 | 72.8% | 53.1% |
| 3258354 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.62 | 44.0 | 2.97e-01 | 73.9% | 50.6% |
| 4015579 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.61 | 44.0 | 2.90e-01 | 76.1% | 41.2% |
| 5002129 | 10.1.1.126 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF7308 | 0.61 | 54.0 | 4.31e-01 | 100.0% | 87.9% |
| 3254492 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.61 | 48.0 | 4.18e-01 | 84.8% | 57.2% |
| 4370161 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.60 | 41.0 | 3.42e-01 | 70.7% | 66.3% |
| 3582226 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.59 | 51.0 | 4.01e-01 | 98.9% | 68.6% |
| 4207211 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.59 | 41.0 | 3.44e-01 | 70.7% | 67.7% |
| 4225063 | 3840.1.1.2 ↗ | a+b two layers › Bacterial conjugation factor PsiB › Bacterial conjugation factor PsiB › Bacterial conjugation factor PsiB › PerB | 0.56 | 45.0 | 4.28e-01 | 89.1% | 81.8% |
| 1100 | 10.1.1.32 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sial-lect-inser | 0.56 | 49.0 | 3.86e-01 | 98.9% | 63.5% |
| 3300051 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.56 | 35.0 | 3.78e-01 | 93.5% | 77.3% |
| 3801806 | 3459.1.1.3 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 | 0.54 | 43.0 | 4.06e-01 | 88.0% | 96.5% |
| 3363360 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.54 | 33.0 | 3.41e-01 | 93.5% | 63.5% |
| 5078569 | 5.1.3.274 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › ANAPC4_WD40 | 0.54 | 42.0 | 3.28e-01 | 85.9% | 49.5% |
| 3673317 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 32.0 | 3.87e-01 | 92.4% | 100.0% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 36.0 | 3.74e-01 | 100.0% | 75.3% |
| 4026957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 33.0 | 3.87e-01 | 100.0% | 96.7% |
| 3300074 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 31.0 | 3.71e-01 | 90.2% | 100.0% |
| 3576128 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 35.0 | 3.36e-01 | 100.0% | 58.3% |
| 3547106 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 35.0 | 3.53e-01 | 100.0% | 71.1% |
| 5012155 | 4221.1.1.0 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like | 0.51 | 36.0 | 3.93e-01 | 77.2% | 94.6% |
| 3584364 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 29.0 | 3.58e-01 | 84.8% | 100.0% |
| 3765274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 35.0 | 3.56e-01 | 100.0% | 72.2% |
| 4075769 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.51 | 31.0 | 3.66e-01 | 98.9% | 100.0% |
| 3819081 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.51 | 44.0 | 3.09e-01 | 96.7% | 95.7% |
| 3924213 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 33.0 | 3.31e-01 | 100.0% | 63.2% |
| 3510526 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 31.0 | 3.59e-01 | 90.2% | 100.0% |
| 3795223 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 29.0 | 3.03e-01 | 84.8% | 58.8% |
| 5022491 | 4.1.1.182 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2097 | 0.51 | 36.0 | 3.78e-01 | 97.8% | 83.5% |
| 4559371 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 32.0 | 3.76e-01 | 100.0% | 95.2% |
| 3516048 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 33.0 | 3.29e-01 | 100.0% | 62.0% |