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BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00380

Bact-Vir

BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00380

Identity

Kingdom:
phage

Quality

81.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-55_101-120
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.66 51.0 3.84e-01 83.1% 68.6%
3fm2A00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.64 53.0 4.30e-01 91.5% 94.7%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.64 52.0 4.26e-01 93.0% 90.6%
4werA02 2.60.200.40 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.55 46.0 3.68e-01 95.8% 90.8%
1yb3A00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.55 43.0 3.43e-01 90.1% 49.1%
5h4eA02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.51 42.0 3.65e-01 94.4% 89.1%
4oxiA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.50 37.0 2.38e-01 81.7% 22.0%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 43.0 3.77e-01 98.6% 74.5%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4997643 2004.1.1.97 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.59 38.0 2.75e-01 98.6% 21.9%
3936421 3948.1.1.0 ↗ alpha bundles › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain 0.58 47.0 3.74e-01 94.4% 64.2%
3593119 3351.1.1.0 ↗ a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 0.55 41.0 3.44e-01 81.7% 55.4%
3958160 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.53 37.0 3.18e-01 74.6% 68.3%
4440674 257.1.1.1 ↗ a+b complex topology › Aromatic aminoacid monoxygenases, catalytic and oligomerization domains › Aromatic aminoacid monoxygenases, catalytic and oligomerization domains › Aromatic aminoacid monoxygenases, catalytic and oligomerization domains › Biopterin_H 0.52 38.0 2.61e-01 78.9% 48.3%
3710856 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.52 39.0 3.44e-01 87.3% 65.8%
4276062 2492.1.1.0 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.52 38.0 3.63e-01 83.1% 83.3%
5001404 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.52 40.0 3.41e-01 87.3% 64.8%
3955321 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 38.0 2.86e-01 81.7% 46.7%
1146735 243.1.1.29 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4783 0.50 43.0 3.77e-01 98.6% 74.5%
D2 medium residues 57-92
PDB
Domain cluster: representative