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BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00391
Bact-VirBML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00391
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-103
Domain cluster:
rep: AP008983.1__BAE47716.1__CST018__00018__D2-124
CATH (74)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qjlA01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.88 | 83.0 | 7.76e-01 | 100.0% | 94.2% |
| 3i4hX01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.87 | 82.0 | 7.51e-01 | 100.0% | 92.2% |
| 4p6qA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.73 | 51.0 | 5.76e-01 | 100.0% | 97.4% |
| 4c8yA01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 65.0 | 6.50e-01 | 100.0% | 95.2% |
| 6ahuH01 | 3.30.70.3250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribonuclease P, Pop5 subunit | 0.72 | 58.0 | 6.05e-01 | 100.0% | 92.6% |
| 2e44A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.72 | 50.0 | 5.69e-01 | 100.0% | 97.3% |
| 7wezA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.72 | 51.0 | 5.72e-01 | 99.0% | 100.0% |
| 4n77A00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 65.0 | 5.23e-01 | 100.0% | 64.6% |
| 3smzA03 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 52.0 | 5.31e-01 | 100.0% | 79.4% |
| 2cqiA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 50.0 | 5.07e-01 | 100.0% | 73.8% |
| 4illB01 | 2.40.30.310 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 62.0 | 5.99e-01 | 100.0% | 93.1% |
| 3aqoA01 | 3.30.70.3400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 49.0 | 5.38e-01 | 100.0% | 95.0% |
| 8cwoF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.66 | 52.0 | 5.56e-01 | 100.0% | 96.7% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 49.0 | 5.26e-01 | 100.0% | 96.4% |
| 2cpiA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 49.0 | 5.33e-01 | 99.0% | 100.0% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 47.0 | 5.06e-01 | 100.0% | 92.9% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.65 | 49.0 | 5.07e-01 | 100.0% | 86.5% |
| 1r89A03 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.65 | 56.0 | 5.09e-01 | 100.0% | 71.6% |
| 4ewtA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 57.0 | 5.55e-01 | 100.0% | 97.4% |
| 8c46A01 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 58.0 | 5.59e-01 | 100.0% | 99.1% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 46.0 | 4.58e-01 | 100.0% | 72.8% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.64 | 53.0 | 5.50e-01 | 100.0% | 98.9% |
| 3c19A01 | 3.30.70.1380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like | 0.63 | 48.0 | 4.94e-01 | 100.0% | 83.8% |
| 1jmtA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 53.0 | 5.47e-01 | 100.0% | 98.0% |
| 1mwqA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.63 | 51.0 | 5.16e-01 | 100.0% | 89.0% |
| 4pxdA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 56.0 | 5.42e-01 | 100.0% | 98.3% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 47.0 | 4.77e-01 | 100.0% | 80.8% |
| 2ahoB03 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.62 | 49.0 | 5.21e-01 | 95.1% | 98.9% |
| 4pxeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 55.0 | 5.30e-01 | 100.0% | 98.3% |
| 3qfwA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.61 | 50.0 | 5.05e-01 | 100.0% | 90.2% |
| 1cqmA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.61 | 49.0 | 5.04e-01 | 100.0% | 91.8% |
| 2j5aA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.61 | 49.0 | 4.93e-01 | 100.0% | 85.8% |
| 3aqpA02 | 3.30.70.3220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 45.0 | 3.96e-01 | 100.0% | 50.6% |
| 2kcuA00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.61 | 43.0 | 3.72e-01 | 100.0% | 45.8% |
| 2iiiA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.60 | 54.0 | 5.15e-01 | 100.0% | 85.8% |
| 1vmbA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.60 | 49.0 | 4.84e-01 | 100.0% | 85.0% |
| 2ldyA01 | 3.30.70.1820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › L1 transposable element, RRM domain | 0.60 | 51.0 | 5.23e-01 | 98.0% | 99.0% |
| 3k7mX02 | 3.90.660.10 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.60 | 42.0 | 3.35e-01 | 100.0% | 35.4% |
| 5aj3F00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.60 | 50.0 | 4.75e-01 | 100.0% | 76.4% |
| 1wkiA01 | 3.90.1170.10 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Ribosomal protein L16/L10 | 0.60 | 53.0 | 5.25e-01 | 100.0% | 96.3% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 53.0 | 5.18e-01 | 100.0% | 98.2% |
| 8d8lF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.59 | 51.0 | 4.78e-01 | 100.0% | 78.0% |
| 3h7hB00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.59 | 42.0 | 4.32e-01 | 100.0% | 80.0% |
| 3mcnA01 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.58 | 46.0 | 4.14e-01 | 100.0% | 59.9% |
| 3bf4A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 50.0 | 5.10e-01 | 100.0% | 99.0% |
| 3w3sA01 | 3.30.70.1920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 51.0 | 4.35e-01 | 100.0% | 59.5% |
| 2ftrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 4.91e-01 | 100.0% | 92.2% |
| 4mt1A06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.58 | 49.0 | 4.99e-01 | 100.0% | 97.0% |
| 5macE01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.58 | 51.0 | 4.65e-01 | 100.0% | 73.4% |
| 5k8mA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 51.0 | 4.72e-01 | 100.0% | 93.9% |
| 3lp8A04 | 3.90.600.10 | Alpha Beta › Alpha-Beta Complex › Glycinamide Ribonucleotide Synthetase; Chain A, domain 4 › Phosphoribosylglycinamide synthetase, C-terminal domain | 0.57 | 47.0 | 4.87e-01 | 98.0% | 96.8% |
| 3pcoB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.57 | 45.0 | 4.69e-01 | 96.1% | 93.6% |
| 7rsfA01 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 50.0 | 4.79e-01 | 100.0% | 100.0% |
| 1t0tV02 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.57 | 48.0 | 4.67e-01 | 100.0% | 84.7% |
| 5xzqF00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 48.0 | 4.79e-01 | 100.0% | 93.2% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 48.0 | 4.81e-01 | 100.0% | 94.1% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 46.0 | 4.72e-01 | 100.0% | 95.0% |
| 3fk4B01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.56 | 49.0 | 4.73e-01 | 100.0% | 93.9% |
| 1fnoA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 50.0 | 4.92e-01 | 100.0% | 99.1% |
| 4eadA03 | 3.90.1170.30 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Pyrimidine nucleoside phosphorylase-like, C-terminal domain | 0.55 | 42.0 | 4.35e-01 | 92.2% | 87.6% |
| 1j5yA02 | 3.30.1340.20 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain | 0.55 | 48.0 | 4.76e-01 | 96.1% | 95.3% |
| 2eabB01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.54 | 46.0 | 3.45e-01 | 92.2% | 66.1% |
| 3aczA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 47.0 | 3.51e-01 | 96.1% | 65.9% |
| 7pjcA02 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.53 | 47.0 | 4.36e-01 | 98.0% | 98.4% |
| 2k0rA00 | 2.60.40.1250 | Mainly Beta › Sandwich › Immunoglobulin-like › Thiol:disulfide interchange protein DsbD, N-terminal domain | 0.53 | 46.0 | 4.29e-01 | 99.0% | 77.3% |
| 1cs1A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 47.0 | 3.55e-01 | 98.0% | 72.2% |
| 2hfsA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.52 | 48.0 | 4.22e-01 | 100.0% | 91.1% |
| 4cyuA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.52 | 46.0 | 4.08e-01 | 100.0% | 84.4% |
| 2g47A04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 42.0 | 3.25e-01 | 90.2% | 85.0% |
| 3gonA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.51 | 46.0 | 4.22e-01 | 100.0% | 95.5% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.51 | 45.0 | 4.12e-01 | 100.0% | 86.9% |
| 5vk4A02 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.51 | 45.0 | 3.81e-01 | 100.0% | 86.9% |
| 7d58G01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.50 | 34.0 | 3.87e-01 | 73.5% | 96.0% |
| 3dcaA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 44.0 | 4.10e-01 | 100.0% | 78.5% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944095 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.88 | 84.0 | 8.00e-01 | 100.0% | 97.4% |
| 1172757 | 304.51.1.13 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6_I-A | 0.88 | 83.0 | 7.71e-01 | 100.0% | 93.4% |
| 5077617 | 304.51.1.13 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6_I-A | 0.87 | 82.0 | 7.71e-01 | 100.0% | 97.5% |
| 185336 | 304.51.1.13 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6_I-A | 0.87 | 82.0 | 7.56e-01 | 100.0% | 93.7% |
| 4393592 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.83 | 79.0 | 7.66e-01 | 100.0% | 94.5% |
| 4928521 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.83 | 78.0 | 6.01e-01 | 100.0% | 52.4% |
| 4971629 | 304.51.1.9 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6_N | 0.82 | 76.0 | 7.08e-01 | 100.0% | 93.6% |
| 5077057 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.82 | 76.0 | 7.46e-01 | 100.0% | 99.1% |
| 2392266 | 304.51.1.13 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6_I-A | 0.82 | 77.0 | 7.20e-01 | 100.0% | 94.2% |
| 4987013 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.82 | 77.0 | 7.47e-01 | 100.0% | 94.5% |
| 3603641 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.81 | 75.0 | 7.36e-01 | 100.0% | 94.5% |
| 4944895 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.78 | 73.0 | 7.14e-01 | 100.0% | 96.4% |
| 4297401 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.74 | 53.0 | 5.87e-01 | 100.0% | 95.0% |
| 3838420 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.71 | 51.0 | 5.42e-01 | 100.0% | 85.6% |
| 4957896 | 304.3.1.4 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MCR_D | 0.70 | 50.0 | 5.26e-01 | 100.0% | 83.3% |
| 3174017 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.70 | 51.0 | 5.62e-01 | 100.0% | 97.5% |
| 3602121 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.68 | 50.0 | 5.15e-01 | 100.0% | 82.1% |
| 5074385 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 49.0 | 5.37e-01 | 100.0% | 97.5% |
| 3923566 | 304.56.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like | 0.67 | 48.0 | 5.35e-01 | 100.0% | 97.5% |
| 3857454 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.65 | 47.0 | 3.03e-01 | 100.0% | 15.6% |
| 3934872 | 3122.1.1.2 ↗ | a+b complex topology › MESD › MESD › MESD › SCVP | 0.65 | 52.0 | 5.23e-01 | 100.0% | 84.8% |
| 3177677 | 304.9.1.6 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 | 0.65 | 58.0 | 5.66e-01 | 100.0% | 90.0% |
| 3494040 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 58.0 | 5.20e-01 | 100.0% | 80.0% |
| 3217173 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.64 | 58.0 | 4.42e-01 | 100.0% | 66.7% |
| 5023983 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.64 | 49.0 | 5.00e-01 | 100.0% | 83.0% |
| 4949889 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.63 | 44.0 | 4.55e-01 | 100.0% | 76.8% |
| 3990621 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.63 | 57.0 | 3.63e-01 | 100.0% | 30.3% |
| 3520250 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.63 | 53.0 | 5.34e-01 | 100.0% | 93.0% |
| 4962162 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.63 | 56.0 | 5.40e-01 | 100.0% | 97.4% |
| 5019207 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.63 | 56.0 | 5.27e-01 | 100.0% | 96.0% |
| 2981912 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.63 | 56.0 | 5.43e-01 | 100.0% | 98.3% |
| 4585125 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.63 | 51.0 | 5.21e-01 | 100.0% | 91.0% |
| 3943250 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.63 | 55.0 | 5.38e-01 | 100.0% | 97.4% |
| 3271185 | 304.12.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MBTP1_N | 0.63 | 52.0 | 5.37e-01 | 99.0% | 98.9% |
| 4205906 | 304.4.1.33 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Darcynin | 0.63 | 52.0 | 5.01e-01 | 100.0% | 80.0% |
| 4032885 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.63 | 55.0 | 5.37e-01 | 100.0% | 97.4% |
| 3386604 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 55.0 | 5.37e-01 | 100.0% | 97.4% |
| 4976603 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 55.0 | 5.52e-01 | 99.0% | 100.0% |
| 3732434 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 55.0 | 4.96e-01 | 100.0% | 98.6% |
| 3591927 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 55.0 | 5.34e-01 | 100.0% | 98.3% |
| 3693212 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.62 | 55.0 | 4.90e-01 | 100.0% | 98.7% |
| 3589481 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 56.0 | 5.48e-01 | 100.0% | 95.5% |
| 3596126 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.62 | 55.0 | 5.31e-01 | 100.0% | 98.3% |
| 4004480 | 2011.1.1.23 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › M20_dimer | 0.62 | 56.0 | 5.31e-01 | 100.0% | 89.2% |
| 4588120 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 54.0 | 5.35e-01 | 100.0% | 100.0% |
| 4808079 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.61 | 52.0 | 5.19e-01 | 100.0% | 90.5% |
| 3196674 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.61 | 54.0 | 5.21e-01 | 100.0% | 95.0% |
| 4383381 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.61 | 54.0 | 5.34e-01 | 100.0% | 100.0% |
| 3164654 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.61 | 55.0 | 5.30e-01 | 100.0% | 93.9% |
| 5047045 | 886.1.1.2 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › GyrI-like | 0.61 | 45.0 | 3.98e-01 | 100.0% | 52.3% |
| 4258815 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.61 | 53.0 | 5.22e-01 | 98.0% | 100.0% |
| 4294100 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.61 | 50.0 | 5.22e-01 | 99.0% | 98.9% |
| 3963871 | 304.5.1.18 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › PrmA | 0.60 | 49.0 | 4.88e-01 | 100.0% | 84.8% |
| 2986050 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.60 | 51.0 | 4.68e-01 | 100.0% | 71.8% |
| 3223328 | 304.8.1.78 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7637 | 0.60 | 51.0 | 5.05e-01 | 100.0% | 89.5% |
| 3839120 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.60 | 50.0 | 4.82e-01 | 100.0% | 79.2% |
| 3959355 | 304.8.1.107 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALO | 0.60 | 48.0 | 4.32e-01 | 99.0% | 62.5% |
| 3220212 | 304.12.1.11 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › DUF7637 | 0.60 | 51.0 | 5.03e-01 | 100.0% | 87.3% |
| 3943661 | 304.5.1.13 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF3574 | 0.59 | 51.0 | 5.15e-01 | 100.0% | 96.0% |
| 3056237 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.59 | 50.0 | 5.05e-01 | 100.0% | 92.2% |
| 4077036 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.59 | 50.0 | 3.88e-01 | 100.0% | 41.8% |
| 4630093 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.59 | 49.0 | 4.72e-01 | 93.1% | 78.3% |
| 2725012 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.59 | 50.0 | 4.34e-01 | 100.0% | 59.7% |
| 5077100 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.59 | 53.0 | 5.02e-01 | 100.0% | 97.5% |
| 3787850 | 304.159.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB | 0.59 | 53.0 | 5.23e-01 | 100.0% | 96.4% |
| 4929491 | 304.5.1.13 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF3574 | 0.59 | 50.0 | 4.91e-01 | 100.0% | 86.2% |
| 4413532 | 304.3.1.4 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MCR_D | 0.59 | 53.0 | 4.69e-01 | 100.0% | 70.7% |
| 4460622 | 325.1.1.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like › GARS_C | 0.59 | 47.0 | 4.96e-01 | 98.0% | 97.8% |
| 5025944 | 304.165.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 | 0.58 | 53.0 | 4.41e-01 | 100.0% | 88.0% |
| 3480548 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.58 | 52.0 | 5.17e-01 | 100.0% | 97.1% |
| 3613979 | 317.1.1.0 ↗ | a+b two layers › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase | 0.58 | 49.0 | 3.94e-01 | 100.0% | 46.3% |
| 3232018 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.58 | 49.0 | 4.40e-01 | 100.0% | 66.2% |
| 3820425 | 3758.1.1.105 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Msl2-3_C | 0.57 | 47.0 | 4.70e-01 | 96.1% | 87.6% |
| 3269973 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.57 | 47.0 | 4.83e-01 | 100.0% | 94.7% |
| 3305756 | 304.39.1.2 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Msl2-3_C | 0.57 | 47.0 | 4.59e-01 | 96.1% | 83.6% |
| 4024519 | 327.11.2.11 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1_3 | 0.57 | 51.0 | 4.97e-01 | 100.0% | 97.4% |
| 3248159 | 325.1.1.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like › GARS_C | 0.57 | 48.0 | 4.68e-01 | 99.0% | 85.5% |
| 3953665 | 304.28.1.13 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › MMPL | 0.56 | 47.0 | 4.58e-01 | 97.1% | 81.7% |
| 3724565 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.56 | 50.0 | 4.87e-01 | 100.0% | 90.4% |
| 4188674 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.56 | 33.0 | 3.55e-01 | 100.0% | 66.7% |
| 4016257 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.55 | 49.0 | 3.63e-01 | 100.0% | 37.1% |
| 3971017 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.55 | 45.0 | 4.49e-01 | 100.0% | 87.3% |
| 3194712 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.54 | 46.0 | 3.43e-01 | 100.0% | 34.4% |
| 3638246 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.54 | 48.0 | 4.50e-01 | 100.0% | 84.0% |
| 3448933 | 304.20.1.1 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind | 0.54 | 47.0 | 4.53e-01 | 100.0% | 88.3% |
| 3416615 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.53 | 35.0 | 3.52e-01 | 70.6% | 64.8% |
| 3728921 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.53 | 45.0 | 4.21e-01 | 100.0% | 75.2% |
| 4501320 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.52 | 46.0 | 3.88e-01 | 100.0% | 67.4% |
| 4591715 | 304.102.1.5 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 | 0.51 | 43.0 | 3.34e-01 | 100.0% | 40.9% |
| 5018354 | 10.18.1.0 ↗ | beta sandwiches › jelly-roll › VPA0735-like › VPA0735-like | 0.50 | 43.0 | 3.39e-01 | 100.0% | 62.9% |
| 3755055 | 331.1.1.12 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF155 | 0.50 | 42.0 | 3.91e-01 | 100.0% | 71.1% |
| 135474 | 304.4.1.10 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF1330 | 0.50 | 44.0 | 4.05e-01 | 100.0% | 77.0% |
D2
high
residues 109-216
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qjlA02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.84 | 75.0 | 7.22e-01 | 100.0% | 85.7% |
| 4c98A02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 63.0 | 5.84e-01 | 100.0% | 84.7% |
| 3zfvA02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 58.0 | 5.18e-01 | 100.0% | 81.4% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.62 | 37.0 | 4.54e-01 | 88.0% | 100.0% |
| 3ayhB01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.62 | 43.0 | 4.86e-01 | 89.8% | 98.7% |
| 4n77A00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 53.0 | 4.37e-01 | 98.1% | 54.9% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.60 | 44.0 | 4.25e-01 | 94.4% | 67.7% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.59 | 38.0 | 3.99e-01 | 98.1% | 72.9% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.56 | 38.0 | 4.31e-01 | 100.0% | 96.2% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 37.0 | 3.94e-01 | 99.1% | 81.1% |
| 3ue2A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 38.0 | 4.12e-01 | 98.1% | 87.5% |
| 4ga6A04 | 3.90.1170.30 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Pyrimidine nucleoside phosphorylase-like, C-terminal domain | 0.54 | 35.0 | 3.94e-01 | 97.2% | 87.7% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.54 | 34.0 | 3.50e-01 | 90.7% | 66.7% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.54 | 38.0 | 3.90e-01 | 100.0% | 76.7% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 35.0 | 3.62e-01 | 97.2% | 70.3% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 35.0 | 3.62e-01 | 98.1% | 70.9% |
| 2j5aA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.53 | 37.0 | 3.80e-01 | 100.0% | 76.4% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.52 | 37.0 | 3.77e-01 | 100.0% | 75.5% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.52 | 38.0 | 3.89e-01 | 100.0% | 77.8% |
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.52 | 32.0 | 3.46e-01 | 84.3% | 71.3% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.52 | 36.0 | 3.56e-01 | 73.1% | 65.5% |
| 1p1lA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 34.0 | 3.47e-01 | 99.1% | 70.6% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.46e-01 | 99.1% | 76.4% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4936600 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.84 | 77.0 | 7.37e-01 | 100.0% | 86.7% |
| 4944096 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.83 | 76.0 | 7.20e-01 | 100.0% | 84.7% |
| 5077058 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.83 | 76.0 | 7.18e-01 | 100.0% | 84.0% |
| 5077618 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.82 | 75.0 | 7.08e-01 | 100.0% | 84.0% |
| 4952416 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.82 | 77.0 | 7.30e-01 | 100.0% | 86.4% |
| 5012279 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.82 | 76.0 | 7.03e-01 | 100.0% | 88.9% |
| 3602774 | 304.51.1.8 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6b_C | 0.76 | 63.0 | 6.24e-01 | 98.1% | 82.6% |
| 5017730 | 304.51.1.8 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6b_C | 0.76 | 63.0 | 6.30e-01 | 98.1% | 86.4% |
| 5070955 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.76 | 70.0 | 6.38e-01 | 100.0% | 85.7% |
| 4944896 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.76 | 70.0 | 6.61e-01 | 100.0% | 86.7% |
| 4928518 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.71 | 65.0 | 5.23e-01 | 100.0% | 53.8% |
| 4989839 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.70 | 61.0 | 5.91e-01 | 99.1% | 84.2% |
| 1172750 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.69 | 63.0 | 5.81e-01 | 100.0% | 83.5% |
| 4971630 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.69 | 63.0 | 5.81e-01 | 100.0% | 83.7% |
| 5036750 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.69 | 63.0 | 5.74e-01 | 100.0% | 82.9% |
| 4309280 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.68 | 63.0 | 5.81e-01 | 100.0% | 82.2% |
| 4955179 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.68 | 61.0 | 5.79e-01 | 100.0% | 83.8% |
| 3956950 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.68 | 62.0 | 5.66e-01 | 100.0% | 78.6% |
| 5009929 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.65 | 58.0 | 5.36e-01 | 100.0% | 86.4% |
| 4062444 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.61 | 39.0 | 4.33e-01 | 98.1% | 82.4% |
| 4025700 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 43.0 | 4.30e-01 | 100.0% | 72.7% |
| 3981111 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.60 | 44.0 | 3.95e-01 | 100.0% | 54.2% |
| 3789238 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 40.0 | 3.96e-01 | 100.0% | 64.3% |
| 3613691 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 45.0 | 4.37e-01 | 98.1% | 74.2% |
| 4243267 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 38.0 | 2.89e-01 | 100.0% | 28.8% |
| 3785393 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 37.0 | 2.83e-01 | 100.0% | 28.0% |
| 4020396 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.55 | 37.0 | 4.03e-01 | 98.1% | 83.3% |
| 3603456 | 304.8.1.82 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 | 0.55 | 38.0 | 4.05e-01 | 100.0% | 85.6% |
| 3603457 | 304.8.1.82 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 | 0.55 | 37.0 | 3.26e-01 | 100.0% | 44.8% |
| 3950626 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.54 | 48.0 | 3.76e-01 | 99.1% | 60.9% |
| 5019207 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.54 | 42.0 | 4.06e-01 | 98.1% | 72.0% |
| 3896233 | 331.3.1.72 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › FANCAA | 0.54 | 47.0 | 4.67e-01 | 98.1% | 91.8% |
| 4630093 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.54 | 40.0 | 3.96e-01 | 98.1% | 73.3% |
| 3623538 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.53 | 35.0 | 3.06e-01 | 92.6% | 40.6% |
| 4941817 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 38.0 | 3.80e-01 | 99.1% | 72.5% |
| 3340180 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.51 | 36.0 | 3.70e-01 | 98.1% | 78.0% |
| 3386604 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.51 | 40.0 | 3.95e-01 | 97.2% | 78.3% |
| 3873184 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 33.0 | 3.77e-01 | 100.0% | 90.0% |
| 4395470 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.50 | 40.0 | 4.06e-01 | 98.1% | 88.5% |