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BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00401

Bact-Vir

BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00401

Identity

Kingdom:
phage

Quality

94.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-153
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 36.0 3.65e-01 100.0% 58.8%
2qdeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 36.0 3.51e-01 100.0% 55.9%
3rcyB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 34.0 3.27e-01 100.0% 51.8%
3mahA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.51 28.0 3.51e-01 93.2% 90.0%
4d8oA03 2.60.40.2660 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 35.0 3.51e-01 72.9% 67.5%
1d1rA00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.50 30.0 3.45e-01 95.8% 81.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2097493 54.1.2.1 beta barrels › EV matrix protein › EV matrix protein › Non-strctural protein 1 › Pneumo_NS1 0.58 48.0 4.60e-01 88.1% 85.2%
4541077 3767.1.1.0 a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain 0.57 42.0 3.96e-01 77.1% 90.7%
3274131 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.54 38.0 3.68e-01 72.0% 76.7%
3815341 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.52 37.0 3.47e-01 72.9% 86.8%