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BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00433
Bact-VirBML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00433
Identity
- Kingdom:
- phage
Quality
79.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 75-128
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a62A01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.79 | 51.0 | 5.41e-01 | 74.1% | 78.3% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 41.0 | 3.79e-01 | 70.4% | 56.3% |
| 2kz5A00 | 1.10.880.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor Skn-1; Chain P › Transcription factor, Skn-1-like, DNA-binding domain | 0.57 | 41.0 | 3.58e-01 | 77.8% | 68.1% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 43.0 | 3.26e-01 | 87.0% | 88.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3570397 | 3469.1.1.0 ↗ | extended segments › Ubiquitin-binding motif (UBM) › Ubiquitin-binding motif (UBM) › Ubiquitin-binding motif (UBM) | 0.74 | 49.0 | 5.07e-01 | 70.4% | 74.0% |
| 5037128 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.56 | 38.0 | 3.67e-01 | 70.4% | 81.7% |
| 4179226 | 3171.1.1.1 ↗ | alpha arrays › Nitrogenase gamma subunit N-terminal domain › Nitrogenase gamma subunit N-terminal domain › Nitrogenase gamma subunit N-terminal domain › DIMCO_N | 0.55 | 37.0 | 3.29e-01 | 70.4% | 63.7% |
| 5017280 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.55 | 40.0 | 2.61e-01 | 77.8% | 76.6% |
| 3960437 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 41.0 | 2.97e-01 | 88.9% | 77.1% |