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BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00471
Bact-VirBML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00471
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 470-574
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 26.0 | 3.32e-01 | 99.0% | 80.0% |
D2
medium
residues 1-75
D3
medium
residues 385-469
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_407201_prodigal-single.1__X__X__00104__D408-487
D4
medium
residues 591-607_887-957
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 38.0 | 4.28e-01 | 70.5% | 69.7% |
| 1a5kC02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 49.0 | 3.24e-01 | 90.9% | 87.1% |
| 7abaA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.59 | 47.0 | 3.15e-01 | 87.5% | 69.4% |
| 1aoaA01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.58 | 47.0 | 4.30e-01 | 89.8% | 100.0% |
| 5hvqC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 3.84e-01 | 78.4% | 65.3% |
| 2ajeA00 | 1.10.246.220 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.56 | 40.0 | 3.96e-01 | 77.3% | 79.4% |
| 3n50B02 | 1.10.287.4280 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 35.0 | 3.87e-01 | 88.6% | 95.5% |
| 3k3wB03 | 1.10.1400.10 | Mainly Alpha › Orthogonal Bundle › Penicillin amidase (Acylase) alpha subunit, N-terminal domain › Aminohydrolase, alpha-helical knob region | 0.51 | 44.0 | 3.70e-01 | 100.0% | 76.1% |
| 4gkfA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.51 | 42.0 | 3.56e-01 | 90.9% | 89.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3801455 | 193.1.1.0 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like | 0.59 | 48.0 | 4.20e-01 | 90.9% | 90.4% |
| 3638437 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 39.0 | 2.97e-01 | 77.3% | 49.5% |
| 4479551 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.52 | 39.0 | 3.93e-01 | 80.7% | 78.9% |
| 4446584 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.51 | 35.0 | 3.68e-01 | 80.7% | 80.0% |
D5
medium
residues 608-798
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ea2A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.66 | 33.0 | 3.43e-01 | 71.2% | 48.7% |
| 3kptA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 33.0 | 3.80e-01 | 81.7% | 70.2% |
| 4bhuA00 | 2.60.40.3490 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 31.0 | 3.69e-01 | 73.3% | 71.1% |
| 2x9zA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 37.0 | 4.14e-01 | 82.2% | 77.2% |
| 3qdhA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 35.0 | 3.84e-01 | 73.8% | 69.2% |
| 7plsA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 29.0 | 3.98e-01 | 72.3% | 100.0% |
| 4iknA02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.55 | 26.0 | 3.43e-01 | 73.3% | 78.3% |
| 6ec6A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 31.0 | 3.16e-01 | 100.0% | 54.3% |
| 1n67A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 32.0 | 3.61e-01 | 74.9% | 74.5% |
| 4p0dA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 34.0 | 3.63e-01 | 74.3% | 70.0% |
| 8begA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 35.0 | 3.79e-01 | 94.2% | 80.0% |
| 8begA03 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 32.0 | 3.63e-01 | 82.7% | 79.9% |
| 4cu7A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 35.0 | 3.76e-01 | 83.8% | 79.3% |
| 4jklA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 33.0 | 3.38e-01 | 83.8% | 67.0% |
| 1d1nA00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 27.0 | 3.62e-01 | 84.3% | 100.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5043829 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.68 | 32.0 | 3.58e-01 | 73.3% | 54.8% |
| 5056154 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.67 | 33.0 | 3.62e-01 | 73.8% | 56.8% |
| 4960841 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.63 | 32.0 | 3.32e-01 | 70.7% | 50.0% |
| 5043435 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.60 | 31.0 | 3.23e-01 | 73.8% | 53.1% |
| 3580256 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 28.0 | 3.89e-01 | 79.6% | 91.6% |
| 5027088 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 28.0 | 3.30e-01 | 73.8% | 62.2% |
| 3519490 | 11.1.5.104 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Ribophorin_I | 0.56 | 29.0 | 3.67e-01 | 71.7% | 82.7% |
| 4940593 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 28.0 | 3.00e-01 | 95.8% | 53.5% |
| 4843675 | 4275.1.1.6 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Tube | 0.55 | 28.0 | 3.18e-01 | 99.5% | 62.3% |
| 1347546 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 34.0 | 3.64e-01 | 74.3% | 70.4% |
| 3418365 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.52 | 44.0 | 3.51e-01 | 93.7% | 80.0% |
| 3622189 | 11.1.1.297 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 | 0.51 | 28.0 | 3.19e-01 | 75.4% | 66.7% |
D6
medium
residues 799-886
Domain cluster:
rep: RifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00468__D116-186
CATH (71)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yhfA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 40.0 | 3.76e-01 | 93.2% | 49.1% |
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 58.0 | 5.46e-01 | 98.9% | 81.1% |
| 2xq0A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.65 | 55.0 | 4.33e-01 | 98.9% | 45.3% |
| 1o4tA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 41.0 | 3.73e-01 | 94.3% | 48.7% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.64 | 42.0 | 4.66e-01 | 98.9% | 92.2% |
| 2x9zA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 58.0 | 4.80e-01 | 100.0% | 60.4% |
| 4igbB02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 56.0 | 4.78e-01 | 98.9% | 64.3% |
| 3lwcA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 38.0 | 3.64e-01 | 94.3% | 51.5% |
| 1vj2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 39.0 | 3.59e-01 | 94.3% | 48.2% |
| 6nwmA01 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.62 | 39.0 | 3.24e-01 | 94.3% | 35.5% |
| 2osxA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 44.0 | 4.30e-01 | 92.0% | 66.7% |
| 2ww8A02 | 2.60.40.2110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 56.0 | 4.29e-01 | 100.0% | 52.5% |
| 3vmnA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 52.0 | 4.43e-01 | 90.9% | 73.2% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.62 | 50.0 | 3.74e-01 | 96.6% | 34.5% |
| 3irpX02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 54.0 | 4.56e-01 | 98.9% | 87.2% |
| 2lu7A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 4.64e-01 | 88.6% | 85.4% |
| 2r15A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 46.0 | 4.34e-01 | 93.2% | 68.5% |
| 4e8dA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 46.0 | 4.02e-01 | 100.0% | 54.3% |
| 2qf4A01 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.59 | 45.0 | 4.70e-01 | 94.3% | 92.4% |
| 2xvlA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 44.0 | 3.70e-01 | 95.5% | 47.6% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 48.0 | 4.29e-01 | 92.0% | 68.7% |
| 4nn5C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 4.21e-01 | 78.4% | 77.4% |
| 2cr6A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 4.77e-01 | 93.2% | 86.8% |
| 1vq8B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 47.0 | 4.11e-01 | 90.9% | 82.5% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 45.0 | 4.31e-01 | 96.6% | 73.1% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 48.0 | 4.28e-01 | 92.0% | 75.4% |
| 2iepA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 4.59e-01 | 95.5% | 83.3% |
| 2y23A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 4.17e-01 | 90.9% | 72.1% |
| 5jdjA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 4.35e-01 | 92.0% | 82.4% |
| 4p02B01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 48.0 | 4.21e-01 | 96.6% | 70.7% |
| 4qawH03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 47.0 | 4.13e-01 | 94.3% | 63.4% |
| 7tg5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 43.0 | 4.02e-01 | 94.3% | 68.2% |
| 1g1cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 4.48e-01 | 94.3% | 82.7% |
| 4ei0A01 | 2.60.40.3550 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 | 0.55 | 48.0 | 4.15e-01 | 98.9% | 83.0% |
| 2cpcA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 4.41e-01 | 92.0% | 87.4% |
| 3l4yA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 44.0 | 3.81e-01 | 93.2% | 55.8% |
| 3nkgA00 | 2.60.120.790 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 3.90e-01 | 98.9% | 84.1% |
| 5fm5P00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 4.51e-01 | 94.3% | 84.7% |
| 6h4lA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 4.45e-01 | 95.5% | 84.4% |
| 1tg7A05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 48.0 | 3.84e-01 | 100.0% | 49.4% |
| 4rsvA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 4.39e-01 | 92.0% | 87.8% |
| 3r4dA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 4.18e-01 | 93.2% | 81.5% |
| 2rikA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 4.41e-01 | 95.5% | 85.3% |
| 2w3jA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 46.0 | 3.98e-01 | 94.3% | 60.6% |
| 5joeA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 4.35e-01 | 93.2% | 85.9% |
| 3kvqA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 4.17e-01 | 93.2% | 86.6% |
| 2zotC00 | 2.60.40.4060 | Mainly Beta › Sandwich › Immunoglobulin-like › Reeler domain | 0.53 | 42.0 | 3.70e-01 | 98.9% | 55.7% |
| 1fhgA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 4.23e-01 | 95.5% | 79.4% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 43.0 | 4.07e-01 | 98.9% | 73.8% |
| 4ofyD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 45.0 | 4.28e-01 | 94.3% | 87.4% |
| 4rlzA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.53 | 43.0 | 4.04e-01 | 92.0% | 97.3% |
| 2rikA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 4.26e-01 | 95.5% | 83.3% |
| 1sq4A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 42.0 | 3.76e-01 | 93.2% | 61.1% |
| 1rc6A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 42.0 | 3.08e-01 | 93.2% | 31.8% |
| 2vzsA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 47.0 | 3.70e-01 | 100.0% | 50.0% |
| 7ehgC01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 45.0 | 3.96e-01 | 95.5% | 66.7% |
| 1ahsA00 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 42.0 | 3.73e-01 | 95.5% | 60.3% |
| 2a38A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 4.17e-01 | 95.5% | 83.3% |
| 1y9qA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 41.0 | 4.11e-01 | 98.9% | 83.9% |
| 5fq0A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 42.0 | 3.93e-01 | 96.6% | 70.9% |
| 4kq7A01 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.51 | 45.0 | 3.73e-01 | 100.0% | 86.4% |
| 3rnsA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 40.0 | 3.84e-01 | 93.2% | 74.0% |
| 2v5tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 4.09e-01 | 94.3% | 84.0% |
| 1sefA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 41.0 | 3.74e-01 | 93.2% | 64.7% |
| 1ogpA02 | 2.60.40.650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.84e-01 | 94.3% | 73.2% |
| 2pfwA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 40.0 | 3.77e-01 | 95.5% | 68.5% |
| 3ibmB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 41.0 | 3.50e-01 | 95.5% | 53.4% |
| 4u7mA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.96e-01 | 95.5% | 81.9% |
| 4e2gC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 39.0 | 3.53e-01 | 94.3% | 59.5% |
| 3i7dA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 44.0 | 3.66e-01 | 97.7% | 62.4% |
| 3h7jA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 40.0 | 3.71e-01 | 94.3% | 67.5% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3604177 | 3386.2.1.0 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp10 domain 2 and domain 3 › gp10 domain 2 and domain 3 | 0.79 | 60.0 | 6.62e-01 | 90.9% | 100.0% |
| 3270071 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 55.0 | 5.64e-01 | 92.0% | 85.9% |
| 4955177 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.68 | 57.0 | 5.38e-01 | 96.6% | 76.2% |
| 3251334 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 53.0 | 5.44e-01 | 93.2% | 88.2% |
| 5052270 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 49.0 | 4.77e-01 | 88.6% | 70.5% |
| 3970328 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.66 | 41.0 | 3.40e-01 | 94.3% | 34.8% |
| 3188281 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 52.0 | 4.48e-01 | 96.6% | 53.6% |
| 3266833 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.65 | 54.0 | 5.44e-01 | 93.2% | 88.9% |
| 4378922 | 10.12.1.104 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding, Cupin_2 | 0.64 | 38.0 | 3.16e-01 | 92.0% | 32.5% |
| 1030915 | 10.12.1.27 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 | 0.64 | 38.0 | 3.28e-01 | 93.2% | 36.9% |
| 4095500 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.64 | 38.0 | 3.22e-01 | 93.2% | 34.7% |
| 3974553 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.64 | 39.0 | 3.39e-01 | 94.3% | 38.6% |
| 3903107 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 51.0 | 4.97e-01 | 96.6% | 80.0% |
| 4225307 | 10.12.1.104 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding, Cupin_2 | 0.64 | 39.0 | 3.16e-01 | 93.2% | 32.1% |
| 3263973 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 54.0 | 4.88e-01 | 93.2% | 69.2% |
| 3259328 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.62 | 51.0 | 5.09e-01 | 88.6% | 85.6% |
| 4052457 | 10.12.1.61 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HgmA_N | 0.62 | 39.0 | 2.81e-01 | 94.3% | 22.0% |
| 3276526 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 50.0 | 4.72e-01 | 93.2% | 72.4% |
| 3165231 | 11.1.1.47 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 | 0.62 | 47.0 | 4.12e-01 | 80.7% | 54.6% |
| 3271989 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 47.0 | 4.70e-01 | 89.8% | 80.0% |
| 4466584 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.62 | 40.0 | 3.33e-01 | 94.3% | 38.0% |
| 3855544 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 49.0 | 4.56e-01 | 96.6% | 67.8% |
| 3894301 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.60 | 43.0 | 4.49e-01 | 83.0% | 81.2% |
| 4608666 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.60 | 38.0 | 3.05e-01 | 94.3% | 31.4% |
| 3989692 | 4081.1.1.12 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 | 0.60 | 54.0 | 4.06e-01 | 98.9% | 51.0% |
| 3565697 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.60 | 49.0 | 3.50e-01 | 95.5% | 29.6% |
| 4497102 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.60 | 40.0 | 3.18e-01 | 94.3% | 33.3% |
| 3874075 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 47.0 | 4.62e-01 | 94.3% | 81.7% |
| 3917787 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 45.0 | 4.56e-01 | 90.9% | 84.7% |
| 5055778 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 46.0 | 4.37e-01 | 97.7% | 71.4% |
| 3884325 | 12.5.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS | 0.58 | 45.0 | 3.63e-01 | 86.4% | 96.2% |
| 3575333 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.58 | 50.0 | 3.69e-01 | 95.5% | 38.0% |
| 1886111 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.57 | 45.0 | 4.60e-01 | 93.2% | 88.4% |
| 4327703 | 11.1.1.577 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PFF1_C | 0.56 | 41.0 | 3.40e-01 | 96.6% | 40.0% |
| 3991700 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 46.0 | 4.43e-01 | 95.5% | 78.0% |
| 3893463 | 11.1.1.86 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Lep_receptor_Ig | 0.56 | 46.0 | 4.57e-01 | 90.9% | 85.3% |
| 3682877 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 46.0 | 3.91e-01 | 100.0% | 53.3% |
| 3899106 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 46.0 | 4.57e-01 | 93.2% | 87.8% |
| 3843483 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.56 | 46.0 | 4.57e-01 | 93.2% | 87.8% |
| 3412290 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 44.0 | 4.24e-01 | 93.2% | 75.0% |
| 3860767 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 46.0 | 4.27e-01 | 94.3% | 70.4% |
| 1718 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.55 | 46.0 | 4.48e-01 | 94.3% | 82.7% |
| 3485746 | 12.2.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › UPF0556 | 0.55 | 47.0 | 4.17e-01 | 95.5% | 96.9% |
| 3541658 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.55 | 44.0 | 4.34e-01 | 94.3% | 81.1% |
| 3582793 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.55 | 44.0 | 4.37e-01 | 95.5% | 84.4% |
| 3177537 | 10.12.1.129 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C, AraC_binding | 0.54 | 42.0 | 4.15e-01 | 90.9% | 76.8% |
| 3251504 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 4.30e-01 | 89.8% | 84.0% |
| 3909143 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 44.0 | 3.87e-01 | 95.5% | 60.0% |
| 3533843 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 43.0 | 4.17e-01 | 93.2% | 76.0% |
| 1868507 | 4178.1.1.1 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 | 0.54 | 43.0 | 3.73e-01 | 93.2% | 55.0% |
| 3933258 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.54 | 45.0 | 4.25e-01 | 94.3% | 76.2% |
| 3768380 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.54 | 44.0 | 3.80e-01 | 94.3% | 56.4% |
| 4550624 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 44.0 | 4.32e-01 | 94.3% | 83.2% |
| 3941351 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.54 | 45.0 | 3.91e-01 | 92.0% | 60.0% |
| 3874738 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.54 | 42.0 | 3.79e-01 | 93.2% | 60.0% |
| 3994347 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 45.0 | 4.39e-01 | 95.5% | 85.3% |
| 4266680 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.53 | 44.0 | 3.80e-01 | 100.0% | 55.9% |
| 3584221 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 45.0 | 3.88e-01 | 94.3% | 58.6% |
| 3889465 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 46.0 | 4.24e-01 | 96.6% | 74.8% |
| 3508267 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 43.0 | 4.17e-01 | 95.5% | 78.0% |
| 4076313 | 10.12.1.98 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer | 0.53 | 43.0 | 4.18e-01 | 96.6% | 78.8% |
| None | — | 0.53 | 43.0 | 2.73e-01 | 95.5% | 16.9% | |
| 3894519 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 43.0 | 4.26e-01 | 95.5% | 84.2% |
| 3284076 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.53 | 42.0 | 3.45e-01 | 94.3% | 46.7% |
| 3520674 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.52 | 44.0 | 2.81e-01 | 97.7% | 41.2% |
| 3942603 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 40.0 | 3.36e-01 | 94.3% | 47.7% |
| 3589978 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.52 | 42.0 | 3.36e-01 | 94.3% | 44.6% |
| 4019585 | 10.32.1.88 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N2 | 0.52 | 46.0 | 3.64e-01 | 100.0% | 50.3% |
| 3279676 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 42.0 | 3.88e-01 | 94.3% | 68.7% |
| 2448132 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.51 | 41.0 | 3.79e-01 | 94.3% | 67.9% |
| 180913 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.51 | 40.0 | 3.81e-01 | 93.2% | 71.8% |
| 3277683 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.51 | 40.0 | 3.27e-01 | 93.2% | 44.8% |
| 3588172 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.51 | 38.0 | 3.25e-01 | 92.0% | 48.0% |
| 1545211 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.50 | 40.0 | 4.05e-01 | 95.5% | 86.7% |
| 3974066 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.50 | 40.0 | 3.36e-01 | 94.3% | 50.7% |
| 3968004 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.50 | 39.0 | 3.25e-01 | 93.2% | 47.7% |
| 3974206 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.50 | 40.0 | 3.33e-01 | 95.5% | 49.0% |
D7
medium
residues 1078-1225