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BML_coassembly_scaffold_214_prodigal-single.1__X__X__00185

Bact-Vir

BML_coassembly_scaffold_214_prodigal-single.1__X__X__00185

Identity

Kingdom:
phage

Quality

80.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 30-215_267-312
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01973.24 best MptE-like 73.4 2.80e-20 74.1% 91.8%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ig3A02 3.40.50.10240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain 0.64 37.0 4.65e-01 79.3% 90.5%
2omkA00 3.40.50.10240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain 0.58 39.0 4.02e-01 75.4% 70.7%
3k94A00 3.40.50.10240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain 0.55 37.0 3.93e-01 75.0% 74.8%
1w3iA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 40.0 3.72e-01 74.6% 92.5%
3b8iC00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.53 39.0 3.69e-01 73.7% 92.8%
3hg7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 29.0 3.73e-01 79.3% 95.2%
2aefA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 25.0 3.53e-01 75.9% 94.8%
3cq9A00 3.40.50.10240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain 0.51 38.0 4.10e-01 76.3% 96.0%
3ftdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 31.0 3.51e-01 73.7% 77.4%
2b3zA02 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.51 39.0 3.95e-01 78.0% 87.6%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3840123 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.82 70.0 6.26e-01 88.4% 73.9%
3386720 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.81 70.0 6.53e-01 89.2% 82.5%
4610054 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.81 69.0 6.00e-01 87.5% 73.2%
3386000 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.80 70.0 6.39e-01 89.2% 77.9%
3838380 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.76 66.0 6.11e-01 89.2% 77.5%
2387778 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.75 65.0 6.02e-01 89.2% 76.5%
3839401 7562.1.1.1 a/b three-layered sandwiches › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › TPK_catalytic 0.73 37.0 5.15e-01 77.6% 92.8%
4325819 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.73 61.0 5.95e-01 87.5% 81.2%
3589662 7562.1.1.1 a/b three-layered sandwiches › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › TPK_catalytic 0.72 38.0 5.03e-01 78.4% 88.9%
5024485 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.72 56.0 5.83e-01 87.5% 86.0%
4004626 7555.1.1.4 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › PF27901 0.72 58.0 5.55e-01 83.2% 86.8%
4976142 7562.1.1.2 a/b three-layered sandwiches › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › MptE-like 0.71 60.0 5.81e-01 87.5% 80.0%
1276806 7562.1.1.1 a/b three-layered sandwiches › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › TPK_catalytic 0.71 37.0 4.86e-01 78.9% 88.0%
4946285 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.70 60.0 5.91e-01 88.8% 83.3%
5071857 7562.1.1.2 a/b three-layered sandwiches › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › MptE-like 0.70 60.0 5.74e-01 88.8% 80.8%
5016816 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.70 60.0 6.04e-01 89.2% 87.7%
4965044 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.69 56.0 5.88e-01 83.6% 90.2%
1276802 7562.1.1.1 a/b three-layered sandwiches › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › TPK_catalytic 0.69 37.0 4.90e-01 78.9% 91.7%
5042052 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.69 56.0 5.77e-01 88.8% 88.2%
4948746 7555.1.1.2 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like 0.68 53.0 5.27e-01 88.4% 76.7%
138632 7562.1.1.1 a/b three-layered sandwiches › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › TPK_catalytic 0.67 36.0 4.73e-01 76.7% 92.4%
4224433 7555.1.1.0 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related 0.64 53.0 5.49e-01 85.3% 96.8%
3676460 7555.1.1.1 a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 0.57 54.0 4.93e-01 100.0% 82.0%
5005450 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.57 26.0 3.81e-01 74.1% 100.0%
4956327 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.55 36.0 4.00e-01 80.6% 82.2%
2801111 7518.1.1.1 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.54 30.0 3.89e-01 84.9% 95.3%
1517806 7518.1.1.1 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.54 28.0 3.63e-01 75.4% 87.4%
5009519 7584.1.1.1 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding 0.54 30.0 3.38e-01 93.1% 69.4%
4966921 2003.1.10.34 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › ATP-grasp_3 0.53 24.0 3.50e-01 73.3% 96.8%
4963544 7518.1.1.1 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.53 29.0 3.77e-01 74.6% 93.8%
2553360 7518.1.1.1 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.53 30.0 3.76e-01 75.0% 92.0%
4978741 7518.1.1.1 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.53 30.0 3.90e-01 73.7% 99.2%
3500538 7518.1.1.1 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.53 30.0 3.72e-01 75.4% 90.6%
4944121 7518.1.1.0 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like 0.52 30.0 3.76e-01 73.7% 94.7%
380266 2003.1.1.39 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP 0.51 26.0 3.49e-01 77.2% 92.3%
3326805 2003.1.11.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like 0.51 31.0 3.75e-01 84.1% 91.3%
1200518 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.51 29.0 3.39e-01 87.5% 76.4%
5028915 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.50 31.0 3.49e-01 91.8% 76.1%
3641562 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.50 29.0 3.62e-01 73.7% 91.0%
3283965 2003.1.5.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD 0.50 30.0 3.30e-01 74.1% 69.7%
D2 medium residues 216-266
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3thxB04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.66 48.0 3.60e-01 78.4% 54.7%
5c9iD01 1.10.439.10 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 0.65 48.0 3.37e-01 80.4% 37.3%
6ks6q01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.65 53.0 3.38e-01 94.1% 71.8%
1hbxA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.62 49.0 4.40e-01 98.0% 62.0%
4l63A00 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.62 50.0 3.19e-01 90.2% 36.9%
4dqnA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.60 38.0 2.73e-01 100.0% 19.6%
4b9kE00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.60 51.0 4.28e-01 94.1% 93.0%
2aw4Z00 4.10.830.30 Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal protein L31 0.60 45.0 4.13e-01 94.1% 61.4%
2kgfA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.59 48.0 3.49e-01 90.2% 56.4%
4l80D00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.58 40.0 2.45e-01 74.5% 13.4%
1fm2A00 1.10.439.10 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 0.57 41.0 3.00e-01 80.4% 35.5%
4hstA01 1.10.439.10 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 0.56 40.0 2.90e-01 76.5% 33.1%
7kfuC02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.56 49.0 3.19e-01 100.0% 22.3%
5owvD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 36.0 2.43e-01 96.1% 14.9%
1vx7000 2.30.170.20 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 0.54 40.0 3.79e-01 90.2% 66.1%
6lydA01 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.54 40.0 2.65e-01 100.0% 17.4%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 46.0 3.76e-01 100.0% 82.7%
5suvC00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.54 42.0 3.24e-01 88.2% 49.6%
5ucoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.54 41.0 3.01e-01 84.3% 98.7%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 38.0 3.01e-01 76.5% 81.0%
4jaqA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 38.0 2.90e-01 84.3% 62.1%
2oarB00 1.10.1200.120 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 0.52 42.0 3.25e-01 94.1% 68.0%
3mmzC00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.51 42.0 2.98e-01 94.1% 29.0%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.51 41.0 2.80e-01 90.2% 73.2%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 44.0 3.57e-01 100.0% 85.6%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3935090 7516.1.1.12 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Fringe 0.74 41.0 2.53e-01 76.5% 9.5%
3257437 193.1.1.1 alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH 0.69 50.0 3.60e-01 78.4% 93.8%
3508249 189.1.1.2 alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP 0.67 57.0 3.86e-01 100.0% 95.6%
4025072 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.66 45.0 3.53e-01 70.6% 32.2%
2043418 210.1.2.1 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Penicil_amidase 0.65 48.0 3.35e-01 80.4% 35.7%
3398736 226.1.1.5 a+b two layers › POZ domain › POZ domain › POZ domain › Skp1_POZ 0.65 46.0 3.48e-01 76.5% 93.1%
3933947 5001.1.1.206 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg, 7TM_GPCR_Srv 0.64 49.0 2.84e-01 84.3% 35.2%
3608516 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.64 43.0 3.35e-01 70.6% 30.0%
3813714 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.63 45.0 2.54e-01 74.5% 6.5%
3272300 2484.1.1.2 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.62 51.0 3.02e-01 90.2% 51.8%
3245317 226.1.1.5 a+b two layers › POZ domain › POZ domain › POZ domain › Skp1_POZ 0.62 46.0 3.48e-01 82.4% 93.1%
3307884 206.1.1.74 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr 0.61 44.0 2.72e-01 76.5% 27.1%
3998938 6110.1.1.1 alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.61 44.0 2.55e-01 98.0% 7.8%
3275078 6166.1.1.1 alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.61 53.0 3.42e-01 96.1% 30.5%
3216203 226.1.1.3 a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ 0.61 43.0 3.19e-01 78.4% 81.3%
3334474 7581.1.1.25 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › FAE1_CUT1_RppA, ACP_syn_III_C 0.60 46.0 3.07e-01 84.3% 50.0%
3519734 7523.1.1.20 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Lig_chan-Glu_bd 0.59 40.0 2.82e-01 70.6% 27.6%
3938890 206.1.2.2 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › PIP5K 0.59 42.0 2.71e-01 80.4% 18.0%
3989299 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.59 42.0 2.48e-01 76.5% 13.6%
3283755 5065.1.1.2 alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD 0.58 49.0 3.06e-01 100.0% 87.1%
3364027 101.1.2.245 alpha arrays › HTH › HTH › winged helix domain › PORR 0.58 46.0 2.98e-01 86.3% 34.4%
3627409 6166.1.1.1 alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.57 48.0 3.25e-01 96.1% 33.5%
3704624 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.57 46.0 3.21e-01 88.2% 76.5%
4605149 3567.1.1.90 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › PFF1_TM 0.57 41.0 2.98e-01 78.4% 80.0%
3403813 603.2.1.12 alpha bundles › STAT-like › STAT › STAT › 7tm_7 0.56 50.0 2.96e-01 98.0% 52.7%
3225405 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.56 50.0 3.58e-01 98.0% 67.9%
3696633 3393.1.1.2 extended segments › CAA3-type cytochrome c oxidase subunit IV › CAA3-type cytochrome c oxidase subunit IV › CAA3-type cytochrome c oxidase subunit IV › Kinesin_assoc 0.56 40.0 3.38e-01 74.5% 40.0%
3702909 6166.1.1.1 alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.56 44.0 2.96e-01 86.3% 86.4%
4778908 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 38.0 3.28e-01 70.6% 44.4%
3300895 375.13.1.3 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › ubiquitin 0.55 37.0 3.63e-01 96.1% 65.5%
3998381 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.55 40.0 2.64e-01 82.4% 59.6%
3711220 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.54 38.0 3.56e-01 84.3% 60.0%
3943457 2007.1.5.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › AroM 0.53 44.0 3.49e-01 96.1% 55.7%
3647625 7581.1.1.39 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C, FAE1_CUT1_RppA 0.53 40.0 2.76e-01 84.3% 53.9%
5064344 7584.1.1.1 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding 0.52 44.0 3.15e-01 96.1% 78.1%
3250605 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.52 41.0 3.27e-01 98.0% 76.0%
3520629 7523.1.1.20 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Lig_chan-Glu_bd 0.51 35.0 2.68e-01 74.5% 45.0%
3886750 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.51 37.0 3.50e-01 84.3% 63.5%
3958749 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 40.0 3.07e-01 100.0% 98.1%
3958255 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.50 43.0 2.61e-01 100.0% 16.4%
3830756 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.50 44.0 3.14e-01 100.0% 67.7%