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BML_coassembly_scaffold_214_prodigal-single.1__X__X__00205

Bact-Vir

BML_coassembly_scaffold_214_prodigal-single.1__X__X__00205

Identity

Kingdom:
phage

Quality

83.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-92
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01471.24 best PG_binding_1 61.2 1.20e-16 85.1% 96.5%
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4c2dA02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.97 92.0 8.37e-01 100.0% 78.8%
3bkhA01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.91 86.0 7.80e-01 100.0% 77.9%
4g54A02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.89 79.0 7.69e-01 94.0% 87.5%
4bolA02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.86 73.0 6.88e-01 95.5% 76.2%
1lbuA01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.85 78.0 7.14e-01 98.5% 84.5%
1eakA01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.79 64.0 6.62e-01 94.0% 93.7%
7aj9A01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.78 67.0 6.77e-01 95.5% 94.0%
1ck7A01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.74 63.0 4.30e-01 94.0% 77.0%
1pxyB03 1.10.418.10 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain 0.65 53.0 4.57e-01 97.0% 73.7%
3tahA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 45.0 4.17e-01 79.1% 89.8%
2nr7A00 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.60 52.0 3.79e-01 98.5% 43.3%
2ikbC00 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.59 51.0 3.90e-01 97.0% 51.6%
2vsgA02 1.10.470.10 Mainly Alpha › Orthogonal Bundle › Variant Surface Glycoprotein, subunit A; domain 2 › Variant Surface Glycoprotein, subunit A, domain 2 0.56 45.0 3.56e-01 95.5% 94.4%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 29.0 2.78e-01 77.6% 41.6%
2ip6A00 1.20.1440.140 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.55 41.0 3.83e-01 82.1% 89.7%
2gwlA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.54 39.0 2.93e-01 80.6% 32.0%
7lb8B01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.54 43.0 2.84e-01 89.6% 74.1%
3keyA01 1.10.10.1080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain 0.54 39.0 3.61e-01 76.1% 81.6%
5jj6B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 36.0 3.27e-01 71.6% 62.5%
2mabA00 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.52 38.0 3.28e-01 77.6% 53.2%
4kk2B00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.52 39.0 2.48e-01 79.1% 20.5%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.81e-01 97.0% 67.8%
2dk4A00 4.10.280.110 Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Pre-mRNA processing factor 4 domain 0.51 40.0 3.90e-01 86.6% 78.9%
1qviA01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.50 40.0 3.49e-01 100.0% 53.9%
6nkoC00 3.40.50.1380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain 0.50 41.0 3.11e-01 97.0% 76.3%
4f03B02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.50 35.0 2.73e-01 73.1% 76.6%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1165079 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.98 94.0 8.06e-01 100.0% 69.8%
4473649 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.96 84.0 7.59e-01 91.0% 78.8%
4032027 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.95 88.0 7.99e-01 97.0% 76.5%
3291401 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.95 84.0 7.63e-01 92.5% 72.9%
1934000 144.1.1.2 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1,PG_binding_5 0.95 86.0 6.29e-01 100.0% 40.5%
3959835 144.1.1.0 alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.95 80.0 7.86e-01 88.1% 84.3%
2859574 144.1.1.0 alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.95 81.0 7.96e-01 92.5% 84.5%
4173379 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.94 87.0 8.07e-01 97.0% 83.7%
1498420 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.93 83.0 7.86e-01 95.5% 81.6%
4117418 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.93 80.0 8.44e-01 89.6% 100.0%
4218606 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.93 83.0 7.65e-01 94.0% 77.1%
3356981 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.92 87.0 8.08e-01 100.0% 87.5%
3275963 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.92 84.0 7.43e-01 95.5% 74.4%
3957237 144.1.1.0 alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.91 79.0 7.59e-01 91.0% 94.7%
3274761 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.91 86.0 6.21e-01 100.0% 70.3%
4312892 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.91 77.0 8.09e-01 89.6% 98.3%
5019285 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.89 83.0 7.27e-01 100.0% 70.5%
4380775 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.89 80.0 5.54e-01 98.5% 32.5%
3955223 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.88 84.0 7.79e-01 100.0% 93.8%
3590520 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.88 77.0 7.19e-01 92.5% 80.0%
1877329 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.88 74.0 7.07e-01 89.6% 78.9%
4010440 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.85 79.0 7.57e-01 98.5% 88.0%
224034 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.85 79.0 7.40e-01 100.0% 85.2%
4055540 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.85 73.0 7.29e-01 97.0% 89.9%
3788528 144.1.1.0 alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.85 76.0 5.72e-01 98.5% 78.1%
3319740 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.83 75.0 6.91e-01 98.5% 77.6%
3395 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.83 77.0 7.11e-01 100.0% 84.3%
3631772 144.1.1.0 alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.83 76.0 5.45e-01 100.0% 66.1%
3299326 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.82 72.0 7.37e-01 95.5% 98.5%
3946056 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.80 67.0 5.67e-01 100.0% 56.5%
3060287 144.1.1.0 alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.80 68.0 6.54e-01 94.0% 82.7%
3221065 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.79 67.0 6.51e-01 92.5% 94.7%
4350179 144.1.1.0 alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.79 58.0 5.90e-01 92.5% 80.0%
4962391 144.1.1.11 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_2 0.78 67.0 5.98e-01 91.0% 73.3%
4600634 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.78 64.0 6.74e-01 88.1% 100.0%
3772398 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.78 71.0 6.63e-01 98.5% 83.7%
3933825 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.77 66.0 6.35e-01 92.5% 88.0%
2819638 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.77 68.0 5.70e-01 100.0% 60.3%
3930763 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.77 68.0 6.56e-01 97.0% 90.7%
3772718 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.77 66.0 6.10e-01 94.0% 77.6%
3994858 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.76 67.0 6.28e-01 95.5% 96.2%
3539881 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.76 66.0 6.38e-01 97.0% 85.3%
4945529 144.1.1.0 alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.76 62.0 6.34e-01 89.6% 98.5%
3222017 144.1.1.0 alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.75 67.0 6.06e-01 98.5% 81.1%
4160453 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.74 62.0 6.15e-01 91.0% 90.0%
3764906 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.73 65.0 6.15e-01 97.0% 82.5%
3247155 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.72 59.0 6.02e-01 95.5% 93.8%
4857662 144.1.1.1 alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.70 58.0 5.70e-01 94.0% 85.9%
3481487 193.1.1.0 alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like 0.64 51.0 4.68e-01 92.5% 77.9%
4972225 2003.1.7.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › LUD_dom 0.63 51.0 3.41e-01 89.6% 23.0%
3241469 130.1.1.1 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.61 44.0 4.74e-01 80.6% 94.5%
5072615 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.57 43.0 3.75e-01 83.6% 82.7%
3719792 4030.1.1.0 alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz 0.52 33.0 3.51e-01 70.1% 71.7%
D2 medium residues 98-144
PDB
Domain cluster: representative
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 54.0 5.42e-01 80.9% 72.9%
3tssA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 54.0 4.73e-01 78.7% 100.0%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 54.0 4.67e-01 78.7% 95.9%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 53.0 5.10e-01 93.6% 69.8%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 52.0 4.16e-01 78.7% 80.0%
2a6hC05 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.70 54.0 4.68e-01 85.1% 90.7%
3bdlA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 58.0 3.92e-01 91.5% 68.7%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 49.0 4.85e-01 74.5% 91.8%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 51.0 4.17e-01 89.4% 44.2%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.68 55.0 4.98e-01 95.7% 65.2%
3havA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.68 48.0 3.87e-01 74.5% 80.9%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 50.0 4.16e-01 91.5% 44.7%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 49.0 4.28e-01 93.6% 50.7%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.67 48.0 4.75e-01 80.9% 74.0%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.66 48.0 4.65e-01 78.7% 69.8%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 4.48e-01 80.9% 64.5%
3a8pB01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 47.0 3.65e-01 80.9% 41.4%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.65 52.0 3.48e-01 89.4% 56.9%
4egvA02 2.40.50.840 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 53.0 4.58e-01 91.5% 64.0%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 47.0 3.86e-01 83.0% 60.4%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 45.0 3.21e-01 74.5% 24.3%
3oyyB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 47.0 4.42e-01 78.7% 72.4%
6qkgA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 50.0 3.81e-01 97.9% 35.1%
5towB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 44.0 3.10e-01 74.5% 36.3%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.64 51.0 3.50e-01 91.5% 54.2%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 49.0 4.13e-01 89.4% 58.6%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.64 52.0 4.69e-01 93.6% 65.7%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 51.0 4.56e-01 100.0% 61.4%
1whzA00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.63 43.0 3.79e-01 70.2% 50.7%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 47.0 4.18e-01 93.6% 54.3%
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.63 46.0 4.85e-01 85.1% 100.0%
2rcnA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 54.0 5.04e-01 100.0% 95.1%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 52.0 4.64e-01 93.6% 79.1%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 47.0 4.38e-01 93.6% 65.0%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 47.0 4.30e-01 95.7% 60.6%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 54.0 4.55e-01 97.9% 87.5%
2rloA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 45.0 3.41e-01 80.9% 65.6%
2dgyA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 51.0 4.38e-01 93.6% 82.3%
1d7qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 51.0 3.75e-01 100.0% 63.6%
4k17B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 47.0 3.70e-01 89.4% 53.2%
1hwmA02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.61 47.0 3.95e-01 87.2% 67.4%
5twbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 48.0 3.20e-01 93.6% 57.0%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 43.0 4.08e-01 95.7% 60.0%
1khiA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 50.0 4.37e-01 93.6% 95.8%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 52.0 4.71e-01 100.0% 80.3%
4k7zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 52.0 3.37e-01 100.0% 39.3%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.60 43.0 4.28e-01 80.9% 72.5%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 50.0 4.43e-01 93.6% 85.1%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 47.0 3.65e-01 89.4% 56.9%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 41.0 2.53e-01 74.5% 13.2%
2zr1A02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.59 45.0 3.81e-01 85.1% 66.3%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 49.0 3.45e-01 100.0% 36.3%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 48.0 4.41e-01 95.7% 75.8%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.59 43.0 4.23e-01 80.9% 72.5%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 45.0 3.60e-01 89.4% 55.7%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 50.0 4.31e-01 100.0% 66.7%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.58 45.0 4.26e-01 89.4% 76.3%
4z3xA03 1.10.569.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 0.58 39.0 2.68e-01 72.3% 26.3%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 49.0 4.42e-01 100.0% 76.1%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.57 41.0 4.08e-01 78.7% 72.5%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 41.0 3.16e-01 80.9% 55.9%
1q57G01 2.20.25.180 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.56 42.0 3.69e-01 83.0% 95.9%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 45.0 3.44e-01 100.0% 81.5%
2a5hA03 6.20.120.40 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 44.0 4.05e-01 87.2% 80.6%
3mkcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 43.0 3.14e-01 91.5% 57.6%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.54 37.0 2.94e-01 74.5% 55.0%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 41.0 2.63e-01 93.6% 41.6%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.54 41.0 3.64e-01 91.5% 78.5%
2qetA02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.54 41.0 3.56e-01 89.4% 69.1%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.54 37.0 3.01e-01 74.5% 56.2%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.54 39.0 2.83e-01 85.1% 57.1%
4fk1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 44.0 3.04e-01 100.0% 46.5%
3h27A00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.53 43.0 2.58e-01 100.0% 22.1%
1t3aA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.53 44.0 2.62e-01 100.0% 43.3%
2d7vB00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.52 37.0 2.72e-01 78.7% 66.7%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.52 35.0 3.09e-01 74.5% 76.8%
4okeA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 39.0 2.80e-01 89.4% 73.8%
4f3nA00 3.40.50.12710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 39.0 2.43e-01 97.9% 70.6%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4833642 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.80 55.0 5.59e-01 80.9% 75.6%
4882420 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.79 54.0 5.32e-01 80.9% 66.7%
3367301 2.1.1.48 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C 0.77 56.0 5.33e-01 80.9% 66.7%
3783013 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.76 50.0 3.00e-01 74.5% 10.0%
5051148 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 53.0 4.89e-01 93.6% 61.7%
3994170 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 50.0 3.28e-01 74.5% 17.6%
3967108 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.70 45.0 4.74e-01 89.4% 77.5%
3654790 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 51.0 4.81e-01 85.1% 81.7%
5036086 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 50.0 4.25e-01 80.9% 61.3%
3722737 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 48.0 3.32e-01 93.6% 21.8%
4504019 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 46.0 4.32e-01 80.9% 58.3%
3450480 5.1.4.297 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 0.66 46.0 2.93e-01 74.5% 18.0%
4103327 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.66 49.0 3.70e-01 83.0% 98.4%
3207525 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.66 58.0 3.51e-01 100.0% 46.6%
3554026 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.65 52.0 4.83e-01 89.4% 75.0%
4285716 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 49.0 4.82e-01 80.9% 86.0%
4014861 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 45.0 2.88e-01 74.5% 15.1%
3247727 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 50.0 3.67e-01 89.4% 52.9%
3839910 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.65 48.0 4.51e-01 93.6% 63.5%
3727988 206.1.1.17 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo 0.65 47.0 3.12e-01 78.7% 30.5%
4943610 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.65 47.0 3.52e-01 80.9% 42.2%
4795169 5.1.4.404 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IP5PC_F 0.65 45.0 3.14e-01 74.5% 22.2%
3499988 5.1.4.327 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd 0.65 49.0 2.70e-01 85.1% 28.3%
4441750 2.4.1.7 beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK 0.64 47.0 4.50e-01 78.7% 76.4%
4932492 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.64 46.0 4.28e-01 80.9% 60.0%
3513810 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 47.0 3.49e-01 83.0% 42.2%
4532614 2.1.1.70 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.64 50.0 4.55e-01 87.2% 93.8%
3345838 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.64 44.0 2.68e-01 74.5% 13.9%
1487666 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.64 49.0 4.80e-01 91.5% 81.8%
4034336 4.8.1.13 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › ComK 0.64 46.0 3.39e-01 83.0% 87.6%
3520270 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.63 45.0 3.53e-01 76.6% 35.2%
4325664 330.7.1.0 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain 0.63 43.0 4.04e-01 72.3% 58.3%
3939496 5.1.4.500 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sec39 0.63 44.0 2.43e-01 74.5% 10.2%
4043931 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.63 45.0 4.27e-01 80.9% 61.7%
4054448 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.63 48.0 4.28e-01 85.1% 92.9%
3269367 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 47.0 3.83e-01 83.0% 72.6%
4976969 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.63 47.0 4.11e-01 83.0% 69.3%
3995153 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 49.0 3.86e-01 89.4% 41.9%
2512682 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 54.0 5.18e-01 97.9% 98.2%
3493556 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 48.0 3.79e-01 89.4% 42.7%
3256547 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 48.0 3.90e-01 89.4% 63.0%
4526081 2.1.1.73 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N 0.63 54.0 4.76e-01 100.0% 97.1%
4041343 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 49.0 4.85e-01 93.6% 82.0%
4683204 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.62 43.0 3.45e-01 76.6% 34.3%
3510696 5.1.4.149 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54 0.62 43.0 2.80e-01 74.5% 18.2%
4459871 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.62 49.0 4.27e-01 89.4% 86.7%
4481543 220.1.1.150 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF986 0.62 47.0 4.09e-01 89.4% 58.7%
3468906 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 50.0 4.19e-01 93.6% 63.5%
5058457 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.61 47.0 4.26e-01 93.6% 61.5%
3180612 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.61 51.0 3.04e-01 100.0% 53.3%
4947543 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.61 41.0 3.61e-01 70.2% 48.6%
2846268 2003.1.2.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.61 52.0 3.51e-01 100.0% 81.5%
3939128 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 46.0 3.65e-01 89.4% 52.7%
4013462 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.60 51.0 3.18e-01 100.0% 18.3%
4208229 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.60 44.0 4.36e-01 85.1% 78.0%
5001380 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 43.0 3.71e-01 78.7% 48.8%
3407758 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.59 45.0 3.54e-01 89.4% 39.1%
3256843 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.59 45.0 3.62e-01 89.4% 46.7%
3416070 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 47.0 2.83e-01 91.5% 96.3%
5022847 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.59 42.0 3.76e-01 80.9% 56.0%
3257938 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.59 40.0 3.75e-01 72.3% 61.7%
4940177 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 41.0 3.75e-01 78.7% 52.9%
1833392 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.58 47.0 3.33e-01 95.7% 82.5%
3941179 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.58 43.0 4.41e-01 85.1% 86.4%
4000029 5.1.4.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.57 49.0 2.98e-01 97.9% 69.2%
3422528 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 43.0 4.10e-01 89.4% 85.0%
3281454 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.57 49.0 2.89e-01 100.0% 22.2%
5027344 1170.1.1.0 beta barrels › IL8-related › IL8-related › IL8 0.57 41.0 3.98e-01 83.0% 76.4%
4019919 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.56 47.0 2.95e-01 100.0% 17.6%
3169468 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 48.0 2.81e-01 100.0% 72.6%
3938768 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.56 41.0 4.15e-01 85.1% 80.9%
3964178 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.55 39.0 2.98e-01 80.9% 63.7%
3599152 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.55 43.0 3.29e-01 100.0% 72.1%
5070602 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.54 43.0 3.17e-01 91.5% 95.0%
3932231 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.54 38.0 3.85e-01 78.7% 87.5%
5016434 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 40.0 3.63e-01 89.4% 73.3%
4029107 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 45.0 2.82e-01 97.9% 80.4%
4968507 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.53 38.0 2.78e-01 78.7% 60.0%
5047206 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.52 38.0 2.75e-01 80.9% 57.3%
5045621 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.50 36.0 2.69e-01 80.9% 56.7%
4455242 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.50 39.0 3.59e-01 91.5% 83.1%
D3 medium residues 145-244
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ftdA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.78 47.0 5.72e-01 77.0% 95.2%
4jxjA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.77 50.0 5.96e-01 73.0% 100.0%
1k3xA02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.75 58.0 5.31e-01 86.0% 63.0%
6ifsB02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.75 52.0 6.01e-01 73.0% 100.0%
4gc5A02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.75 54.0 5.65e-01 79.0% 83.3%
3twkA02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.75 54.0 4.68e-01 86.0% 50.3%
3tqsA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.74 45.0 5.41e-01 75.0% 93.8%
1mu5A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.74 51.0 5.66e-01 76.0% 91.0%
2vqeM01 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.73 47.0 5.47e-01 71.0% 91.5%
8d8lM01 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.73 48.0 5.29e-01 73.0% 82.7%
1k82A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.71 49.0 4.60e-01 73.0% 58.5%
1tdzA02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.69 53.0 4.77e-01 87.0% 59.7%
3w0fA02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.67 55.0 4.90e-01 88.0% 64.0%
1zq9A02 1.10.8.480 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.66 50.0 5.05e-01 80.0% 98.0%
4yerA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 58.0 4.45e-01 97.0% 66.2%
3gruA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.65 49.0 5.26e-01 81.0% 97.7%
4mb7A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.64 52.0 4.57e-01 88.0% 61.9%
3vk8A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.63 52.0 4.46e-01 87.0% 65.1%
4finB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 55.0 3.98e-01 96.0% 58.5%
5jszA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 54.0 3.98e-01 99.0% 65.7%
1j8yF01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.60 43.0 4.63e-01 74.0% 97.7%
3i5gC02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 40.0 4.49e-01 72.0% 97.2%
7oq4Z01 1.20.120.950 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 0.58 41.0 4.13e-01 73.0% 81.6%
3cz1A00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.58 49.0 4.72e-01 98.0% 82.1%
1dqeA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.56 49.0 4.47e-01 98.0% 81.0%
2wcjA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.56 49.0 4.45e-01 99.0% 81.6%
1ls1A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.52 42.0 4.41e-01 87.0% 100.0%
3f6tA02 1.10.20.110 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › 0.51 39.0 3.48e-01 83.0% 95.2%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4937429 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.80 51.0 6.05e-01 85.0% 92.9%
4073009 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.79 55.0 6.19e-01 81.0% 94.7%
3699849 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.79 57.0 6.16e-01 81.0% 88.2%
3947964 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.79 72.0 6.29e-01 99.0% 73.8%
4092906 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.79 52.0 6.14e-01 78.0% 97.1%
4931056 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.77 52.0 5.84e-01 86.0% 92.0%
4574113 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.76 54.0 6.09e-01 75.0% 97.3%
5039312 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.76 53.0 5.90e-01 87.0% 90.0%
4347496 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.76 53.0 6.03e-01 79.0% 96.0%
4935087 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.76 54.0 4.96e-01 86.0% 56.9%
4929481 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.76 52.0 5.68e-01 76.0% 87.5%
4258382 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.76 56.0 6.21e-01 80.0% 97.5%
4123959 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.75 58.0 5.13e-01 87.0% 58.0%
3944743 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.75 58.0 5.81e-01 87.0% 80.0%
3994879 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.75 54.0 5.55e-01 80.0% 77.9%
4399901 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.75 51.0 5.69e-01 79.0% 89.7%
4975930 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.75 53.0 4.75e-01 78.0% 54.1%
4313858 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.75 51.0 5.90e-01 75.0% 100.0%
3486672 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.75 54.0 5.66e-01 79.0% 83.3%
4968258 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.75 51.0 4.77e-01 87.0% 56.8%
4980837 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.75 52.0 4.85e-01 77.0% 59.2%
4934443 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.74 52.0 4.62e-01 88.0% 51.4%
5010628 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.74 51.0 5.51e-01 75.0% 83.5%
4984919 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.74 52.0 4.53e-01 77.0% 49.7%
5059549 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.74 51.0 5.49e-01 74.0% 83.5%
5051445 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.74 52.0 4.71e-01 87.0% 55.4%
4342579 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.74 51.0 5.67e-01 82.0% 90.0%
4994521 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.74 51.0 4.84e-01 86.0% 60.0%
5081513 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.74 52.0 4.85e-01 86.0% 60.0%
3555324 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.74 54.0 5.28e-01 80.0% 70.0%
5045440 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.73 51.0 4.63e-01 86.0% 54.6%
4973104 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.73 48.0 4.54e-01 71.0% 55.8%
3402309 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.73 54.0 5.77e-01 80.0% 90.6%
4938159 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.73 49.0 5.57e-01 74.0% 92.0%
5074820 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.73 51.0 5.06e-01 76.0% 68.6%
4523909 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.73 47.0 4.57e-01 72.0% 59.1%
5079981 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.73 55.0 5.30e-01 96.0% 69.6%
5034089 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.73 51.0 4.72e-01 87.0% 57.6%
4982925 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.73 51.0 5.49e-01 87.0% 85.9%
5066824 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.73 49.0 5.44e-01 75.0% 87.5%
4964967 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.73 49.0 4.41e-01 78.0% 50.0%
5072380 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.72 49.0 4.93e-01 78.0% 69.0%
4206148 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.72 53.0 5.78e-01 78.0% 95.0%
5047592 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.72 53.0 5.78e-01 80.0% 95.0%
4068411 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.72 53.0 5.32e-01 86.0% 76.0%
4655710 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.72 52.0 4.59e-01 77.0% 52.4%
4979326 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.72 51.0 4.73e-01 77.0% 58.4%
4114962 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.72 51.0 5.47e-01 76.0% 85.9%
5069452 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.72 51.0 4.65e-01 78.0% 56.2%
5041518 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.72 52.0 5.35e-01 87.0% 78.9%
4978435 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.72 52.0 5.09e-01 86.0% 69.1%
3725278 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.72 53.0 5.51e-01 86.0% 82.1%
5003054 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.72 50.0 4.51e-01 78.0% 53.3%
5031246 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.72 50.0 4.59e-01 87.0% 55.4%
4649458 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.72 52.0 5.27e-01 86.0% 76.0%
4514230 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.72 52.0 5.27e-01 86.0% 76.0%
4160379 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.72 52.0 5.16e-01 86.0% 72.4%
4281411 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.71 50.0 5.33e-01 78.0% 84.7%
3237353 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.71 55.0 5.53e-01 81.0% 99.0%
5027504 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.71 48.0 5.07e-01 80.0% 77.8%
4445208 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.71 51.0 5.75e-01 77.0% 100.0%
4960632 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.71 50.0 5.48e-01 78.0% 91.3%
5043419 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.71 50.0 5.63e-01 76.0% 97.3%
4975049 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.70 51.0 5.60e-01 75.0% 96.2%
4996515 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.70 55.0 5.57e-01 86.0% 83.0%
4999970 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.69 51.0 4.59e-01 87.0% 56.3%
4532012 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.69 54.0 5.81e-01 98.0% 96.5%
4945709 102.2.1.14 alpha arrays › HhH/H2TH › H2TH › H2TH › zf-FPG_IleRS 0.69 55.0 5.51e-01 86.0% 83.0%
4042537 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.69 51.0 4.51e-01 88.0% 55.0%
3287874 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.69 51.0 5.39e-01 86.0% 86.7%
5019728 102.2.1.3 alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.68 49.0 5.27e-01 78.0% 88.2%
3603784 102.9.1.0 alpha arrays › HhH/H2TH › Cdc45 CID domain › Cdc45 CID domain 0.68 50.0 5.28e-01 98.0% 85.6%
4033402 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.68 52.0 5.38e-01 86.0% 86.3%
4052526 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.67 52.0 5.11e-01 86.0% 76.2%
5062293 102.2.1.15 alpha arrays › HhH/H2TH › H2TH › H2TH › Topo-VIb_trans 0.67 50.0 4.80e-01 78.0% 75.7%
4233305 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.67 51.0 4.98e-01 86.0% 72.7%
5016076 1085.1.1.0 few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 0.67 50.0 5.16e-01 98.0% 82.1%
1157322 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.67 55.0 5.61e-01 87.0% 90.5%
4580533 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.67 60.0 4.62e-01 99.0% 73.3%
5032908 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.67 53.0 5.29e-01 87.0% 81.0%
4092544 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.67 51.0 5.11e-01 86.0% 80.0%
3658222 108.1.1.26 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.66 52.0 5.57e-01 96.0% 98.8%
3861278 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.66 51.0 5.30e-01 87.0% 87.4%
None 0.66 50.0 4.94e-01 86.0% 76.2%
4241375 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.64 59.0 4.44e-01 99.0% 73.0%
4254733 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.63 55.0 4.24e-01 96.0% 63.6%
3704070 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.63 55.0 3.85e-01 96.0% 46.0%
145647 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.62 51.0 5.09e-01 88.0% 98.1%
3960230 102.2.1.4 alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.62 52.0 4.93e-01 91.0% 77.5%
3175983 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 53.0 3.75e-01 95.0% 45.4%
3809229 108.1.1.89 alpha arrays › EF-hand › EF-hand-related › EF-hand › PMD 0.52 39.0 3.71e-01 85.0% 66.7%