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BML_coassembly_scaffold_25_prodigal-single.1__X__X__00099
Bact-VirBML_coassembly_scaffold_25_prodigal-single.1__X__X__00099
Identity
- Kingdom:
- phage
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 26-127_169-180
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fgoA00 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.62 | 56.0 | 4.77e-01 | 98.2% | 76.2% |
| 7u7hA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 40.0 | 3.17e-01 | 78.1% | 87.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3789397 | 219.1.1.22 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Rad4 | 0.59 | 52.0 | 3.86e-01 | 98.2% | 59.0% |
| 3377750 | 2004.1.1.91 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LpxK | 0.58 | 29.0 | 2.25e-01 | 96.5% | 21.6% |
D2
medium
residues 128-168_181-206
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mypA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 47.0 | 3.88e-01 | 80.6% | 96.7% |
| 1w4tA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.59 | 45.0 | 4.01e-01 | 83.6% | 99.0% |
| 2if6B00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.57 | 49.0 | 3.62e-01 | 97.0% | 96.1% |
| 4nswA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 47.0 | 4.05e-01 | 95.5% | 76.1% |
| 1lvoA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 46.0 | 4.26e-01 | 95.5% | 77.3% |
| 1e2tA03 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.53 | 43.0 | 3.64e-01 | 92.5% | 81.2% |
| 2kcjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 43.0 | 3.70e-01 | 92.5% | 75.9% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.52 | 41.0 | 3.05e-01 | 89.6% | 43.8% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.51 | 44.0 | 3.15e-01 | 98.5% | 49.5% |
| 2iteA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 39.0 | 3.33e-01 | 86.6% | 99.2% |
| 1mkfA02 | 2.60.40.1340 | Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like | 0.51 | 43.0 | 3.32e-01 | 100.0% | 51.2% |
| 7d9cA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.56e-01 | 100.0% | 62.8% |
| 2moqA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 37.0 | 2.95e-01 | 79.1% | 76.4% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3786534 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 48.0 | 3.52e-01 | 82.1% | 44.4% |
| 3899113 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.61 | 46.0 | 3.62e-01 | 82.1% | 56.0% |
| 3487098 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.59 | 41.0 | 3.17e-01 | 74.6% | 48.2% |
| 3882396 | 219.1.1.97 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase | 0.59 | 51.0 | 3.50e-01 | 95.5% | 37.0% |
| 5064007 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.59 | 51.0 | 3.74e-01 | 97.0% | 36.1% |
| 3330447 | 219.1.1.91 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › EDR1 | 0.59 | 41.0 | 2.83e-01 | 71.6% | 24.7% |
| 3871299 | 219.1.1.97 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase | 0.59 | 51.0 | 3.62e-01 | 98.5% | 40.0% |
| 3444657 | 5.1.5.98 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › b-prop_At3g26010-like | 0.58 | 45.0 | 2.93e-01 | 85.1% | 99.0% |
| 3724738 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.58 | 43.0 | 2.87e-01 | 83.6% | 36.5% |
| 3638833 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.58 | 43.0 | 3.11e-01 | 83.6% | 50.9% |
| 3478759 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.57 | 42.0 | 3.22e-01 | 82.1% | 48.3% |
| 3929966 | 219.1.1.97 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase | 0.57 | 49.0 | 3.48e-01 | 98.5% | 40.5% |
| 3573608 | 219.1.1.111 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 | 0.57 | 48.0 | 3.31e-01 | 97.0% | 42.8% |
| 3622158 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.56 | 42.0 | 3.05e-01 | 82.1% | 43.7% |
| 3480227 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.56 | 42.0 | 3.09e-01 | 82.1% | 42.0% |
| 3562938 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 47.0 | 3.81e-01 | 94.0% | 65.6% |
| 3330259 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.55 | 42.0 | 2.86e-01 | 85.1% | 99.6% |
| 3227081 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 39.0 | 3.68e-01 | 74.6% | 76.2% |
| 3089705 | 807.1.1.1 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD | 0.54 | 42.0 | 4.03e-01 | 86.6% | 74.1% |
| 4564186 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 45.0 | 3.72e-01 | 94.0% | 76.0% |
| 3275991 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 47.0 | 3.74e-01 | 98.5% | 68.9% |
| 4650682 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.53 | 43.0 | 3.48e-01 | 89.6% | 66.2% |
| 4943576 | 4.23.1.0 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like | 0.52 | 42.0 | 3.48e-01 | 89.6% | 70.4% |
| 3171221 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 43.0 | 3.42e-01 | 92.5% | 75.0% |
| 1030893 | 11.26.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Viral chemokine binding protein m3 › Viral chemokine binding protein m3 › M3 | 0.52 | 45.0 | 3.40e-01 | 100.0% | 51.4% |
| 3624043 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 43.0 | 3.17e-01 | 94.0% | 50.5% |
| 3173787 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 43.0 | 3.59e-01 | 94.0% | 79.2% |
| 3593474 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 40.0 | 2.86e-01 | 88.1% | 42.9% |
| 4003142 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.50 | 42.0 | 2.97e-01 | 100.0% | 41.6% |
| 4536848 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.50 | 39.0 | 3.26e-01 | 89.6% | 56.2% |