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BML_coassembly_scaffold_25_prodigal-single.1__X__X__00119
Bact-VirBML_coassembly_scaffold_25_prodigal-single.1__X__X__00119
Identity
- Kingdom:
- phage
Quality
67.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-64
Domain cluster:
representative
CATH (75)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.69 | 49.0 | 3.88e-01 | 76.7% | 41.2% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.69 | 48.0 | 4.22e-01 | 73.3% | 61.4% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.68 | 47.0 | 3.64e-01 | 78.3% | 33.9% |
| 3o4hA01 | 2.130.10.150 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain | 0.68 | 59.0 | 3.80e-01 | 100.0% | 46.3% |
| 4ftxB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.68 | 54.0 | 4.32e-01 | 91.7% | 57.8% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.67 | 46.0 | 4.17e-01 | 71.7% | 64.3% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 47.0 | 4.30e-01 | 75.0% | 71.6% |
| 5ocrA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 51.0 | 3.33e-01 | 85.0% | 82.0% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 46.0 | 4.35e-01 | 73.3% | 80.3% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 46.0 | 3.65e-01 | 76.7% | 41.4% |
| 1h30A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 53.0 | 3.61e-01 | 88.3% | 57.7% |
| 8ep4C01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 51.0 | 3.38e-01 | 86.7% | 81.7% |
| 6xofA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 50.0 | 3.31e-01 | 85.0% | 84.6% |
| 6n44A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 48.0 | 3.66e-01 | 81.7% | 81.3% |
| 2vy0B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 51.0 | 3.38e-01 | 91.7% | 86.3% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.63 | 44.0 | 4.02e-01 | 80.0% | 54.2% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 55.0 | 3.49e-01 | 100.0% | 37.6% |
| 8a7dC01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 45.0 | 3.04e-01 | 76.7% | 61.1% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 42.0 | 3.35e-01 | 80.0% | 34.4% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 43.0 | 3.43e-01 | 75.0% | 41.0% |
| 5ocqA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 51.0 | 3.33e-01 | 91.7% | 84.5% |
| 1upsB01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 48.0 | 3.13e-01 | 85.0% | 84.5% |
| 1ms5B02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 45.0 | 2.97e-01 | 78.3% | 67.9% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.61 | 42.0 | 3.83e-01 | 71.7% | 61.9% |
| 3h3lC00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.61 | 49.0 | 3.33e-01 | 88.3% | 92.4% |
| 5nldB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 46.0 | 3.55e-01 | 81.7% | 80.4% |
| 6fcvB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 51.0 | 3.18e-01 | 98.3% | 46.6% |
| 4ccdA03 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.60 | 50.0 | 3.54e-01 | 95.0% | 62.5% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.60 | 45.0 | 3.52e-01 | 85.0% | 80.1% |
| 2r0hA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 51.0 | 3.84e-01 | 100.0% | 75.0% |
| 1uaiA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 3.41e-01 | 95.0% | 55.6% |
| 3auxA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 52.0 | 3.23e-01 | 100.0% | 32.8% |
| 1oq1B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 46.0 | 3.16e-01 | 86.7% | 91.3% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 51.0 | 3.63e-01 | 100.0% | 53.5% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.58 | 39.0 | 3.69e-01 | 91.7% | 58.3% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 41.0 | 3.12e-01 | 73.3% | 51.9% |
| 1qw2A00 | 3.30.1980.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC | 0.58 | 42.0 | 3.70e-01 | 83.3% | 90.2% |
| 1e2tA03 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.58 | 40.0 | 3.39e-01 | 76.7% | 53.0% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.57 | 49.0 | 3.62e-01 | 100.0% | 63.3% |
| 4bpzA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 49.0 | 3.32e-01 | 100.0% | 67.3% |
| 1umzA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 48.0 | 3.09e-01 | 91.7% | 62.5% |
| 3zsjA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 49.0 | 3.79e-01 | 98.3% | 78.3% |
| 4ym3C00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 50.0 | 3.82e-01 | 100.0% | 76.4% |
| 2uwaA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 46.0 | 3.00e-01 | 90.0% | 66.4% |
| 3vv1A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 3.70e-01 | 98.3% | 73.8% |
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 38.0 | 3.32e-01 | 73.3% | 50.5% |
| 1d2sA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 49.0 | 3.54e-01 | 98.3% | 60.6% |
| 3ap9A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 48.0 | 3.65e-01 | 98.3% | 74.2% |
| 1nkgA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 45.0 | 3.16e-01 | 100.0% | 90.4% |
| 5dzeA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 46.0 | 3.30e-01 | 96.7% | 54.3% |
| 2gumB01 | 2.30.30.1230 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 42.0 | 3.64e-01 | 85.0% | 68.0% |
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.55 | 39.0 | 3.71e-01 | 73.3% | 78.3% |
| 2wsuB02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 50.0 | 3.74e-01 | 100.0% | 87.5% |
| 5gm0A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 49.0 | 3.82e-01 | 100.0% | 90.0% |
| 1e2tA02 | 3.30.1120.150 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 46.0 | 4.14e-01 | 96.7% | 72.1% |
| 4azzA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.55 | 46.0 | 3.49e-01 | 100.0% | 79.4% |
| 4agrB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 3.62e-01 | 100.0% | 75.7% |
| 2wsuA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 49.0 | 3.71e-01 | 100.0% | 89.2% |
| 5xrkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 49.0 | 3.71e-01 | 100.0% | 85.8% |
| 1mveA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 3.18e-01 | 100.0% | 48.3% |
| 2jj6A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 3.75e-01 | 100.0% | 93.3% |
| 5vxzA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 47.0 | 3.33e-01 | 98.3% | 52.3% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.54 | 39.0 | 3.14e-01 | 76.7% | 96.7% |
| 3zpyB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 3.05e-01 | 96.7% | 87.0% |
| 5gm0A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 3.46e-01 | 96.7% | 81.1% |
| 1gbgA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.10e-01 | 95.0% | 83.2% |
| 7ccbA01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.53 | 45.0 | 3.50e-01 | 100.0% | 86.2% |
| 4jqtA01 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.52 | 45.0 | 3.16e-01 | 96.7% | 82.1% |
| 2jd4A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 3.30e-01 | 100.0% | 61.4% |
| 2h0bC00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 3.24e-01 | 98.3% | 48.6% |
| 7c8fA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 2.92e-01 | 95.0% | 85.7% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.52 | 44.0 | 3.50e-01 | 100.0% | 70.4% |
| 2htaA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 43.0 | 2.82e-01 | 100.0% | 19.9% |
| 7nn3B01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 40.0 | 2.68e-01 | 95.0% | 89.0% |
| 3u1xA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.50 | 41.0 | 2.84e-01 | 91.7% | 90.8% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3230771 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.75 | 48.0 | 4.19e-01 | 70.0% | 43.3% |
| 3236787 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.74 | 58.0 | 4.56e-01 | 98.3% | 40.0% |
| 3479716 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.71 | 49.0 | 4.39e-01 | 71.7% | 62.4% |
| 3228484 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.70 | 56.0 | 3.67e-01 | 98.3% | 20.8% |
| 3211176 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.69 | 54.0 | 3.58e-01 | 98.3% | 20.4% |
| 4073461 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.69 | 62.0 | 4.30e-01 | 100.0% | 34.2% |
| 3235669 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 53.0 | 4.27e-01 | 98.3% | 41.6% |
| 4965842 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.68 | 53.0 | 3.38e-01 | 81.7% | 42.6% |
| 3212555 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.68 | 53.0 | 4.23e-01 | 100.0% | 40.8% |
| 3247669 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.67 | 53.0 | 3.54e-01 | 98.3% | 20.5% |
| 3227136 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.67 | 52.0 | 3.62e-01 | 98.3% | 24.8% |
| 3463325 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.66 | 55.0 | 3.68e-01 | 96.7% | 93.7% |
| 5014493 | 331.3.1.12 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like | 0.66 | 46.0 | 3.14e-01 | 75.0% | 33.0% |
| 1170462 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.66 | 46.0 | 4.59e-01 | 73.3% | 93.4% |
| 5053366 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.65 | 56.0 | 3.52e-01 | 95.0% | 42.5% |
| 4987737 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.65 | 51.0 | 3.19e-01 | 83.3% | 38.4% |
| 3172856 | 5.1.4.575 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30290 | 0.65 | 53.0 | 3.47e-01 | 91.7% | 41.4% |
| 3228574 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.65 | 50.0 | 3.35e-01 | 98.3% | 20.5% |
| 3250134 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.63 | 46.0 | 3.70e-01 | 78.3% | 45.8% |
| 3586315 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.63 | 48.0 | 3.82e-01 | 85.0% | 86.7% |
| 3427234 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 54.0 | 3.59e-01 | 98.3% | 36.7% |
| 4020125 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.62 | 51.0 | 3.27e-01 | 91.7% | 79.0% |
| 1073 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.62 | 48.0 | 3.14e-01 | 85.0% | 84.2% |
| 4275082 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.61 | 48.0 | 3.14e-01 | 85.0% | 86.2% |
| 5071965 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.61 | 46.0 | 4.04e-01 | 83.3% | 95.8% |
| 3881671 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.61 | 43.0 | 3.54e-01 | 76.7% | 98.3% |
| 3736617 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.61 | 49.0 | 3.26e-01 | 90.0% | 80.8% |
| 4176398 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.61 | 52.0 | 3.35e-01 | 95.0% | 44.7% |
| 4468976 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.61 | 51.0 | 3.28e-01 | 93.3% | 39.3% |
| 5068365 | 10.1.1.21 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › 3keto-disac_hyd | 0.61 | 45.0 | 3.25e-01 | 80.0% | 63.4% |
| 3961571 | 3699.1.1.3 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synth | 0.61 | 51.0 | 4.07e-01 | 93.3% | 98.3% |
| 3629240 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.60 | 43.0 | 3.62e-01 | 76.7% | 99.1% |
| 5052539 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.60 | 42.0 | 3.90e-01 | 73.3% | 62.7% |
| 4271594 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.60 | 51.0 | 3.82e-01 | 98.3% | 98.8% |
| 4085834 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.60 | 51.0 | 3.28e-01 | 96.7% | 41.6% |
| 3550970 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.59 | 41.0 | 3.48e-01 | 75.0% | 99.1% |
| 3525695 | 10.1.1.77 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1, Laminin_G_2 | 0.58 | 45.0 | 2.77e-01 | 91.7% | 74.7% |
| 4608534 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.57 | 46.0 | 2.91e-01 | 88.3% | 72.9% |
| 3936845 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.57 | 50.0 | 3.69e-01 | 96.7% | 71.0% |
| 3921189 | 10.1.1.1 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 | 0.57 | 49.0 | 3.54e-01 | 98.3% | 53.3% |
| 3822766 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.57 | 51.0 | 3.73e-01 | 100.0% | 87.5% |
| 2665242 | 10.1.1.27 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 | 0.57 | 49.0 | 3.27e-01 | 100.0% | 51.5% |
| 3964807 | 9.7.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › PF28291 | 0.57 | 47.0 | 4.04e-01 | 91.7% | 74.7% |
| 3214083 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 50.0 | 3.71e-01 | 98.3% | 71.0% |
| 3352288 | 10.1.1.12 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16,XET_C | 0.56 | 47.0 | 2.95e-01 | 90.0% | 55.3% |
| 5011042 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.56 | 47.0 | 3.82e-01 | 100.0% | 54.6% |
| 3520129 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.56 | 49.0 | 3.44e-01 | 100.0% | 52.5% |
| 4013175 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.56 | 48.0 | 3.18e-01 | 100.0% | 51.1% |
| 4640223 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.56 | 46.0 | 3.00e-01 | 88.3% | 51.0% |
| 3235531 | 207.1.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 | 0.56 | 46.0 | 3.11e-01 | 95.0% | 23.7% |
| 3310516 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.56 | 47.0 | 3.30e-01 | 96.7% | 51.4% |
| 2325452 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.55 | 48.0 | 3.15e-01 | 95.0% | 67.9% |
| 154364 | 10.1.1.21 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › 3keto-disac_hyd | 0.55 | 46.0 | 3.51e-01 | 100.0% | 81.0% |
| 184887 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.55 | 35.0 | 3.75e-01 | 100.0% | 79.6% |
| 4297807 | 850.1.1.2 ↗ | a+b three layers › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › DUF1805 | 0.55 | 38.0 | 3.32e-01 | 75.0% | 76.0% |
| 3935302 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.55 | 47.0 | 3.37e-01 | 93.3% | 83.6% |
| 3260998 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.54 | 45.0 | 3.23e-01 | 100.0% | 54.1% |
| 4018159 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.53 | 43.0 | 2.98e-01 | 98.3% | 40.4% |
| 5068490 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 44.0 | 3.22e-01 | 98.3% | 66.5% |
| 4026175 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 46.0 | 3.16e-01 | 96.7% | 85.9% |
| 3501831 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 46.0 | 3.20e-01 | 100.0% | 74.1% |
| 3991476 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.52 | 46.0 | 3.65e-01 | 100.0% | 86.9% |
| 3415319 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 45.0 | 3.17e-01 | 100.0% | 62.0% |
| 5001720 | 850.1.1.2 ↗ | a+b three layers › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › DUF1805 | 0.52 | 37.0 | 3.32e-01 | 78.3% | 78.9% |
| 3514432 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 45.0 | 3.31e-01 | 100.0% | 67.9% |
D2
high
residues 99-148
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r6iA01 | 3.30.2180.10 | Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like | 0.83 | 66.0 | 5.24e-01 | 86.0% | 51.0% |
| 2dt8A02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.79 | 65.0 | 4.73e-01 | 90.0% | 51.5% |
| 2a4vA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.73 | 60.0 | 4.33e-01 | 94.0% | 81.1% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.73 | 57.0 | 5.55e-01 | 90.0% | 80.7% |
| 6ui4A01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.70 | 54.0 | 4.55e-01 | 86.0% | 86.4% |
| 1qviA01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.70 | 58.0 | 4.52e-01 | 96.0% | 70.4% |
| 1nw2A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.69 | 49.0 | 3.89e-01 | 76.0% | 82.9% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.69 | 60.0 | 4.74e-01 | 100.0% | 90.6% |
| 2knrA00 | 3.40.1530.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) | 0.68 | 50.0 | 3.90e-01 | 82.0% | 48.3% |
| 1ts9A00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.68 | 53.0 | 4.28e-01 | 86.0% | 94.9% |
| 3df7A02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.67 | 48.0 | 3.48e-01 | 76.0% | 40.9% |
| 1aukA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.64 | 57.0 | 3.35e-01 | 100.0% | 25.8% |
| 3mixA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.63 | 54.0 | 4.15e-01 | 100.0% | 76.7% |
| 1mkeA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 46.0 | 3.36e-01 | 92.0% | 29.9% |
| 2onfA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.58 | 49.0 | 3.61e-01 | 94.0% | 44.0% |
| 5g0xA00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.57 | 51.0 | 3.05e-01 | 100.0% | 25.9% |
| 2e8eA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.57 | 47.0 | 3.56e-01 | 94.0% | 39.4% |
| 3o0lA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 45.0 | 3.56e-01 | 94.0% | 74.3% |
| 2dy1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 49.0 | 3.06e-01 | 100.0% | 24.0% |
| 1vwxp00 | 2.20.25.30 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 41.0 | 3.41e-01 | 94.0% | 46.2% |
| 4bndA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.54 | 43.0 | 3.09e-01 | 90.0% | 96.8% |
| 2kcwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 40.0 | 2.91e-01 | 100.0% | 25.9% |
| 2w5qA01 | 3.30.1120.170 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 46.0 | 3.77e-01 | 98.0% | 62.4% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4251998 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.83 | 64.0 | 5.14e-01 | 84.0% | 44.2% |
| 4069833 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.83 | 63.0 | 4.64e-01 | 84.0% | 32.3% |
| 3264236 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.71 | 54.0 | 4.33e-01 | 86.0% | 42.0% |
| 3474420 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.70 | 60.0 | 4.32e-01 | 100.0% | 32.7% |
| 3267918 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 51.0 | 5.03e-01 | 82.0% | 72.7% |
| 4202176 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.70 | 59.0 | 4.02e-01 | 100.0% | 25.8% |
| 4001872 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.67 | 57.0 | 3.89e-01 | 98.0% | 28.1% |
| 3579413 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 47.0 | 5.05e-01 | 82.0% | 97.5% |
| 4992470 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.65 | 53.0 | 4.96e-01 | 92.0% | 73.3% |
| 3714703 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.65 | 55.0 | 4.34e-01 | 92.0% | 51.0% |
| 3403471 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.64 | 46.0 | 4.63e-01 | 82.0% | 78.0% |
| 3577308 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.64 | 46.0 | 4.54e-01 | 80.0% | 83.6% |
| 3502426 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.63 | 46.0 | 3.98e-01 | 80.0% | 100.0% |
| 4973040 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.63 | 55.0 | 4.51e-01 | 94.0% | 92.9% |
| 5013701 | 3572.1.1.2 ↗ | a+b complex topology › Cascade subunit Csa5 › Cascade subunit Csa5 › Cascade subunit Csa5 › Cas_Csa5 | 0.62 | 55.0 | 4.28e-01 | 98.0% | 65.7% |
| 5078429 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.62 | 53.0 | 3.29e-01 | 96.0% | 96.6% |
| 3238170 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 43.0 | 4.27e-01 | 78.0% | 70.9% |
| 5061930 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 51.0 | 4.15e-01 | 94.0% | 50.5% |
| 4679015 | 220.1.1.150 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF986 | 0.60 | 45.0 | 3.93e-01 | 88.0% | 52.5% |
| 4978597 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.60 | 52.0 | 3.46e-01 | 94.0% | 53.0% |
| 3840027 | 218.1.1.9 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › PF27310 | 0.60 | 43.0 | 3.96e-01 | 80.0% | 62.9% |
| 3925231 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 43.0 | 4.10e-01 | 82.0% | 66.7% |
| 4065466 | 220.1.1.150 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF986 | 0.59 | 42.0 | 3.71e-01 | 80.0% | 48.8% |
| 3606563 | 719.2.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N | 0.59 | 49.0 | 3.67e-01 | 94.0% | 80.8% |
| 3931217 | 502.1.1.0 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain | 0.58 | 40.0 | 3.80e-01 | 82.0% | 58.5% |
| 3646092 | 719.2.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N | 0.58 | 50.0 | 3.69e-01 | 98.0% | 78.5% |
| 5073392 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.57 | 49.0 | 3.96e-01 | 96.0% | 60.0% |
| 4249934 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.56 | 41.0 | 3.28e-01 | 84.0% | 42.5% |
| 4951953 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.56 | 49.0 | 3.32e-01 | 100.0% | 69.7% |
| 5077887 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.54 | 41.0 | 2.78e-01 | 84.0% | 83.3% |
| 4928223 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 41.0 | 3.56e-01 | 86.0% | 100.0% |
| 4128954 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.53 | 38.0 | 3.46e-01 | 86.0% | 54.3% |
| 3252596 | 719.2.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N | 0.53 | 44.0 | 3.40e-01 | 98.0% | 90.8% |
| 3931230 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 37.0 | 3.58e-01 | 84.0% | 84.6% |
| 4564341 | 327.19.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C | 0.51 | 41.0 | 3.56e-01 | 90.0% | 87.5% |
| 4003584 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.50 | 40.0 | 3.63e-01 | 92.0% | 64.3% |