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BML_coassembly_scaffold_25_prodigal-single.1__X__X__00125

Bact-Vir

BML_coassembly_scaffold_25_prodigal-single.1__X__X__00125

Identity

Kingdom:
phage

Quality

67.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 39-112
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gi3C00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.66 37.0 4.20e-01 74.3% 71.9%
1gmuA01 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.59 42.0 4.42e-01 75.7% 92.5%
1r5jA02 3.40.50.10750 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isocitrate/Isopropylmalate dehydrogenase-like 0.56 39.0 3.05e-01 71.6% 94.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3759578 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.71 36.0 4.00e-01 71.6% 60.0%
4376727 275.1.1.0 a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase 0.53 34.0 3.68e-01 73.0% 81.7%
4128756 275.1.1.0 a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase 0.51 34.0 3.15e-01 75.7% 52.0%