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BML_coassembly_scaffold_25_prodigal-single.1__X__X__00147
Bact-VirBML_coassembly_scaffold_25_prodigal-single.1__X__X__00147
Identity
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-49
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wgmA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.68 | 53.0 | 4.69e-01 | 87.5% | 71.2% |
| 3goxA03 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.68 | 47.0 | 3.99e-01 | 72.9% | 61.7% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.67 | 51.0 | 4.38e-01 | 85.4% | 65.0% |
| 4wz2C00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.67 | 52.0 | 4.55e-01 | 87.5% | 68.9% |
| 2ecjA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 47.0 | 4.49e-01 | 85.4% | 67.2% |
| 2djaA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.63 | 45.0 | 3.90e-01 | 87.5% | 46.4% |
| 3l11A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 51.0 | 4.05e-01 | 93.8% | 54.8% |
| 4uf0A03 | 2.10.110.20 | Mainly Beta › Ribbon › Cysteine Rich Protein › | 0.61 | 50.0 | 4.64e-01 | 95.8% | 83.1% |
| 6k2kA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 48.0 | 4.60e-01 | 91.7% | 87.7% |
| 4jcjB01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.60 | 47.0 | 4.29e-01 | 87.5% | 67.7% |
| 4tn3A01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.60 | 42.0 | 4.40e-01 | 91.7% | 92.5% |
| 2g43B01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 48.0 | 4.01e-01 | 100.0% | 77.6% |
| 3gv4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 49.0 | 4.03e-01 | 100.0% | 64.6% |
| 2yvrA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.59 | 45.0 | 4.65e-01 | 97.9% | 95.6% |
| 3ddtC00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.59 | 42.0 | 4.35e-01 | 87.5% | 88.6% |
| 3mhsA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 49.0 | 3.72e-01 | 100.0% | 62.2% |
| 2yhoE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 45.0 | 4.01e-01 | 85.4% | 65.7% |
| 3pvlA04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 39.0 | 3.20e-01 | 89.6% | 86.9% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929415 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.75 | 56.0 | 5.15e-01 | 87.5% | 63.3% |
| 5074886 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.72 | 52.0 | 4.58e-01 | 77.1% | 81.4% |
| 4187705 | 377.1.3.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › zf-FPG_IleRS | 0.71 | 54.0 | 5.45e-01 | 83.3% | 81.6% |
| 3383207 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 62.0 | 5.20e-01 | 97.9% | 91.3% |
| 3354160 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 60.0 | 4.45e-01 | 97.9% | 56.2% |
| 3368882 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.69 | 51.0 | 5.43e-01 | 85.4% | 97.5% |
| 160874 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.67 | 52.0 | 4.59e-01 | 85.4% | 71.8% |
| 3996137 | 376.1.1.97 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RING_ZNF598 | 0.67 | 53.0 | 4.65e-01 | 89.6% | 69.3% |
| 3706296 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.67 | 57.0 | 5.13e-01 | 100.0% | 70.0% |
| None | — | 0.67 | 51.0 | 4.21e-01 | 85.4% | 62.2% | |
| 4488994 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.67 | 51.0 | 4.72e-01 | 87.5% | 89.2% |
| 3567222 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.67 | 52.0 | 4.37e-01 | 87.5% | 68.2% |
| 4148983 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.67 | 51.0 | 4.73e-01 | 87.5% | 78.5% |
| 3670642 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.66 | 53.0 | 4.84e-01 | 91.7% | 69.2% |
| 3721362 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.66 | 51.0 | 4.81e-01 | 87.5% | 83.3% |
| 3890373 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.65 | 51.0 | 5.14e-01 | 93.8% | 86.0% |
| 3690337 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.65 | 49.0 | 4.34e-01 | 85.4% | 68.0% |
| 3618459 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.65 | 51.0 | 4.96e-01 | 87.5% | 96.4% |
| 3422846 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.65 | 53.0 | 4.46e-01 | 95.8% | 52.9% |
| 3806562 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.65 | 53.0 | 5.41e-01 | 95.8% | 97.8% |
| 3900532 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.65 | 51.0 | 4.73e-01 | 97.9% | 67.7% |
| 3424317 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.65 | 51.0 | 5.22e-01 | 91.7% | 95.6% |
| 3510156 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.65 | 53.0 | 4.94e-01 | 91.7% | 93.3% |
| 3676361 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.65 | 50.0 | 4.51e-01 | 91.7% | 61.4% |
| 3796504 | 376.1.1.97 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RING_ZNF598 | 0.65 | 55.0 | 4.15e-01 | 100.0% | 53.6% |
| 3225707 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.65 | 49.0 | 4.41e-01 | 85.4% | 84.3% |
| 3347552 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.65 | 52.0 | 5.02e-01 | 95.8% | 81.8% |
| 4588532 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 50.0 | 4.33e-01 | 89.6% | 72.5% |
| 3810319 | 376.1.1.59 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-B_box | 0.64 | 53.0 | 5.41e-01 | 95.8% | 100.0% |
| 3664680 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.64 | 55.0 | 4.42e-01 | 97.9% | 92.6% |
| 3998218 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.64 | 54.0 | 3.87e-01 | 97.9% | 44.6% |
| 3607037 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.64 | 53.0 | 4.46e-01 | 95.8% | 80.0% |
| 3357823 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.64 | 51.0 | 4.85e-01 | 95.8% | 75.0% |
| 3312159 | 904.1.1.27 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box, ANCHR-like_BBOX | 0.64 | 54.0 | 4.25e-01 | 97.9% | 86.7% |
| 3721914 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.64 | 51.0 | 4.02e-01 | 91.7% | 58.1% |
| 3537276 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 51.0 | 4.14e-01 | 91.7% | 66.3% |
| 3734069 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.63 | 51.0 | 4.17e-01 | 91.7% | 63.2% |
| 3404818 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.63 | 45.0 | 4.28e-01 | 79.2% | 70.0% |
| 3726259 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.63 | 50.0 | 4.74e-01 | 91.7% | 76.7% |
| 3886265 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.63 | 53.0 | 3.69e-01 | 95.8% | 29.4% |
| 3364276 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.63 | 50.0 | 5.00e-01 | 89.6% | 90.0% |
| 3704671 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.63 | 51.0 | 3.62e-01 | 95.8% | 28.1% |
| None | — | 0.63 | 49.0 | 3.30e-01 | 93.8% | 21.0% | |
| 3765510 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.63 | 51.0 | 4.00e-01 | 93.8% | 51.8% |
| 3593825 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 48.0 | 4.09e-01 | 87.5% | 76.5% |
| 3662931 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.63 | 51.0 | 5.14e-01 | 95.8% | 96.0% |
| 3691267 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.62 | 51.0 | 4.18e-01 | 91.7% | 64.4% |
| 3738947 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.62 | 51.0 | 4.23e-01 | 97.9% | 67.4% |
| 3487743 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 48.0 | 4.02e-01 | 85.4% | 61.2% |
| 3529537 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.62 | 51.0 | 4.65e-01 | 91.7% | 72.3% |
| 3899147 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.62 | 52.0 | 4.70e-01 | 97.9% | 90.0% |
| 3229366 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.62 | 51.0 | 4.93e-01 | 95.8% | 87.3% |
| 4252085 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.62 | 50.0 | 4.94e-01 | 91.7% | 94.0% |
| 3593356 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 48.0 | 4.43e-01 | 87.5% | 79.7% |
| 3891887 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.61 | 50.0 | 4.24e-01 | 93.8% | 67.1% |
| 3911089 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.61 | 51.0 | 4.25e-01 | 93.8% | 67.1% |
| 3307592 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.61 | 48.0 | 4.75e-01 | 87.5% | 100.0% |
| 1868260 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.61 | 51.0 | 4.04e-01 | 100.0% | 60.0% |
| 4883627 | 376.1.1.24 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Prok-RING_4 | 0.61 | 52.0 | 4.39e-01 | 97.9% | 80.7% |
| 3743794 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 50.0 | 4.98e-01 | 95.8% | 94.0% |
| 3422810 | 376.1.1.74 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RING_XB3-XBAT31 | 0.61 | 47.0 | 4.08e-01 | 89.6% | 78.8% |
| None | — | 0.60 | 47.0 | 3.25e-01 | 95.8% | 23.2% | |
| 3594279 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.60 | 47.0 | 3.32e-01 | 91.7% | 26.5% |
| None | — | 0.60 | 46.0 | 3.16e-01 | 93.8% | 21.5% | |
| 3370897 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 49.0 | 3.64e-01 | 100.0% | 44.1% |
| 3611350 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.59 | 47.0 | 4.22e-01 | 95.8% | 84.0% |
| 3601324 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 47.0 | 3.67e-01 | 100.0% | 60.8% |
| 3925077 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.58 | 47.0 | 3.82e-01 | 91.7% | 61.0% |
| 3776722 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.58 | 48.0 | 4.68e-01 | 95.8% | 94.5% |
| 3273034 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 48.0 | 4.05e-01 | 95.8% | 57.6% |
| 3491166 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.57 | 47.0 | 3.92e-01 | 100.0% | 49.5% |
| 3998855 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.57 | 46.0 | 4.16e-01 | 93.8% | 88.6% |
| 3991522 | 376.1.1.103 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41 | 0.56 | 44.0 | 4.17e-01 | 95.8% | 90.8% |
| 3915979 | 904.1.1.38 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box, PF27984 | 0.56 | 42.0 | 2.91e-01 | 91.7% | 21.0% |
| 3922328 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.56 | 42.0 | 3.12e-01 | 91.7% | 28.7% |
| 3565975 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.55 | 42.0 | 2.92e-01 | 93.8% | 21.5% |
D2
medium
residues 55-94