Back to structures

BML_coassembly_scaffold_25_prodigal-single.1__X__X__00161

Bact-Vir

BML_coassembly_scaffold_25_prodigal-single.1__X__X__00161

Identity

Kingdom:
phage

Quality

82.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-122
PDB
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ebfX01 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.65 46.0 3.87e-01 73.5% 58.5%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 38.0 3.13e-01 71.7% 76.5%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4956695 4.15.1.0 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like 0.60 28.0 3.24e-01 72.6% 58.7%
3339169 4.1.1.415 beta barrels › SH3 › SH3 › SH3 › PNPOx_N 0.57 29.0 3.29e-01 75.2% 62.4%
3595726 2492.1.1.8 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 0.56 48.0 3.96e-01 97.3% 91.4%
3409974 2492.1.1.8 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 0.56 48.0 4.06e-01 97.3% 87.5%
3799804 2492.1.1.8 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 0.55 48.0 4.04e-01 97.3% 84.4%
3505724 2492.1.1.8 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 0.55 48.0 4.45e-01 97.3% 84.1%
3260431 2492.1.1.8 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 0.55 47.0 4.10e-01 97.3% 93.0%
3246591 2492.1.1.8 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 0.54 46.0 3.98e-01 97.3% 87.4%
3606466 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 34.0 2.94e-01 71.7% 38.9%
3541221 382.1.1.1 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.53 36.0 4.01e-01 71.7% 90.6%
3755463 382.1.1.1 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.51 34.0 3.78e-01 70.8% 86.7%
3857127 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.51 34.0 3.86e-01 71.7% 91.8%