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BML_coassembly_scaffold_25_prodigal-single.1__X__X__00282
Bact-VirBML_coassembly_scaffold_25_prodigal-single.1__X__X__00282
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 59-168
D2
high
residues 172-301
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v4aA03 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.62 | 39.0 | 3.71e-01 | 96.9% | 54.2% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 46.0 | 4.80e-01 | 100.0% | 100.0% |
| 3fhnA04 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.54 | 37.0 | 3.71e-01 | 87.7% | 68.7% |
| 3kdqA00 | 6.10.320.10 | Special › Helix non-globular › Ferritin › | 0.52 | 35.0 | 3.34e-01 | 100.0% | 59.2% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 44.0 | 4.00e-01 | 100.0% | 70.9% |
| 1ki1B01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.50 | 45.0 | 3.91e-01 | 98.5% | 84.4% |
| 4d8mA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.50 | 38.0 | 3.21e-01 | 79.2% | 63.0% |
| 1keaA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.50 | 30.0 | 3.20e-01 | 91.5% | 66.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3632739 | 604.1.1.205 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › EMP70 | 0.57 | 41.0 | 3.60e-01 | 73.8% | 95.4% |
| 4950124 | 187.1.1.0 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin | 0.57 | 40.0 | 4.39e-01 | 99.2% | 89.5% |
| 3624985 | 101.1.10.21 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C | 0.57 | 39.0 | 3.06e-01 | 70.8% | 75.7% |
| 1519065 | 109.1.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_3 | 0.56 | 32.0 | 3.25e-01 | 99.2% | 56.3% |
| 3539619 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.54 | 49.0 | 4.69e-01 | 99.2% | 89.3% |
| 3518983 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.54 | 49.0 | 4.82e-01 | 99.2% | 96.4% |
| 3925206 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.53 | 48.0 | 4.69e-01 | 98.5% | 92.1% |
| 3200734 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.52 | 46.0 | 4.25e-01 | 98.5% | 98.8% |
| 3212065 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.51 | 46.0 | 4.62e-01 | 99.2% | 97.0% |
| 3592033 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.50 | 45.0 | 3.86e-01 | 99.2% | 96.3% |