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BML_coassembly_scaffold_25_prodigal-single.1__X__X__00341
Bact-VirBML_coassembly_scaffold_25_prodigal-single.1__X__X__00341
Identity
- Kingdom:
- phage
Quality
93.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-30_42-87
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gzrB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.68 | 46.0 | 4.46e-01 | 80.3% | 63.6% |
| 1op1A00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.67 | 46.0 | 4.43e-01 | 81.7% | 62.2% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.67 | 44.0 | 4.33e-01 | 84.5% | 62.8% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.66 | 41.0 | 3.73e-01 | 84.5% | 44.4% |
| 3b5oA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.65 | 56.0 | 3.97e-01 | 98.6% | 83.5% |
| 5xtck00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 41.0 | 3.75e-01 | 80.3% | 47.4% |
| 4hb1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.65 | 34.0 | 4.26e-01 | 81.7% | 84.1% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.64 | 44.0 | 3.88e-01 | 80.3% | 47.2% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.64 | 43.0 | 3.78e-01 | 84.5% | 46.7% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.62 | 46.0 | 4.49e-01 | 100.0% | 73.1% |
| 8e9gK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 43.0 | 3.97e-01 | 73.2% | 81.3% |
| 8a0rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 38.0 | 3.19e-01 | 85.9% | 37.7% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.56 | 44.0 | 4.43e-01 | 95.8% | 83.8% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.55 | 42.0 | 4.20e-01 | 100.0% | 83.8% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 46.0 | 4.22e-01 | 95.8% | 71.7% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.52 | 43.0 | 4.46e-01 | 100.0% | 100.0% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 39.0 | 3.16e-01 | 85.9% | 40.8% |
| 1k92A02 | 3.90.1260.10 | Alpha Beta › Alpha-Beta Complex › Argininosuccinate synthetase, chain A, domain 2 › Argininosuccinate synthetase, chain A, domain 2 | 0.51 | 42.0 | 2.96e-01 | 88.7% | 73.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4290271 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.73 | 45.0 | 4.13e-01 | 84.5% | 48.9% |
| 4068046 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.68 | 47.0 | 4.19e-01 | 70.4% | 78.6% |
| 3268739 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.66 | 42.0 | 3.76e-01 | 83.1% | 46.0% |
| 5077081 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.62 | 43.0 | 3.05e-01 | 71.8% | 84.4% |
| 3752445 | 102.1.1.143 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › XTBD | 0.60 | 36.0 | 3.68e-01 | 87.3% | 61.8% |
| 3737505 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.56 | 40.0 | 3.96e-01 | 84.5% | 70.7% |
| 3330281 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.56 | 46.0 | 3.98e-01 | 90.1% | 70.9% |
| 5016324 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.55 | 41.0 | 3.79e-01 | 80.3% | 74.7% |
| 3263783 | 7558.1.1.1 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase | 0.55 | 46.0 | 3.20e-01 | 95.8% | 82.4% |
| 4365052 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.54 | 49.0 | 4.44e-01 | 100.0% | 97.9% |
| 5016679 | 605.1.1.356 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF2178 | 0.54 | 44.0 | 3.59e-01 | 87.3% | 82.8% |
| 4032991 | 6072.1.1.0 ↗ | alpha arrays › Transmembrane domain of envelope protein E › Transmembrane domain of envelope protein E › Transmembrane domain of envelope protein E | 0.54 | 49.0 | 4.40e-01 | 100.0% | 89.5% |
| 3766742 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.52 | 43.0 | 3.66e-01 | 90.1% | 82.6% |