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BML_coassembly_scaffold_25_prodigal-single.1__X__X__00383
Bact-VirBML_coassembly_scaffold_25_prodigal-single.1__X__X__00383
Identity
- Kingdom:
- phage
Quality
71.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-149
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ajfA00 | 1.20.1440.190 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tenuivirus movement protein | 0.63 | 46.0 | 4.99e-01 | 85.2% | 93.5% |
| 3g36B00 | 1.20.890.10 | Mainly Alpha › Up-down Bundle › cAMP-dependent Protein Kinase, Chain A › cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain | 0.56 | 26.0 | 3.60e-01 | 72.2% | 96.1% |
| 2rjiA00 | 1.10.1740.170 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Erythrocyte binding antigen 175 region VI | 0.54 | 31.0 | 3.53e-01 | 78.3% | 75.0% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.53 | 34.0 | 3.83e-01 | 91.3% | 87.2% |
| 1c00A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 40.0 | 2.70e-01 | 86.1% | 39.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3501047 | 109.4.1.1402 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec3_CC, Sec3_C-term | 0.58 | 45.0 | 2.75e-01 | 80.9% | 16.3% |
| 3447012 | 3788.1.1.6 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › PIR2-like_helical | 0.58 | 50.0 | 4.29e-01 | 94.8% | 89.2% |
| 4948281 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.53 | 37.0 | 3.42e-01 | 79.1% | 55.0% |
| 3224888 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.50 | 42.0 | 3.08e-01 | 95.7% | 51.0% |