←Back to structures
BML_coassembly_scaffold_25_prodigal-single.1__X__X__00418
Bact-VirBML_coassembly_scaffold_25_prodigal-single.1__X__X__00418
Identity
- Kingdom:
- phage
Quality
64.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-87
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t38A01 | 1.10.8.1060 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Corynebacterium glutamicum thioredoxin-dependent arsenate reductase, N-terminal domain | 0.72 | 41.0 | 4.41e-01 | 73.2% | 64.8% |
| 1hc7A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.71 | 47.0 | 3.22e-01 | 82.9% | 20.4% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 32.0 | 3.59e-01 | 78.0% | 57.1% |
| 4uulA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.58 | 50.0 | 3.93e-01 | 97.6% | 100.0% |
| 1ucrB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 36.0 | 3.79e-01 | 79.3% | 73.3% |
| 2xzmT00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 47.0 | 3.88e-01 | 95.1% | 91.3% |
| 3t5xA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 36.0 | 3.81e-01 | 79.3% | 76.4% |
| 2plyB01 | 1.10.10.2770 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 34.0 | 2.94e-01 | 87.8% | 39.9% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 45.0 | 3.80e-01 | 98.8% | 63.8% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 46.0 | 3.82e-01 | 98.8% | 61.4% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 46.0 | 3.79e-01 | 100.0% | 64.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3948523 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 38.0 | 4.13e-01 | 76.8% | 62.9% |
| 3781173 | 101.1.2.73 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82 | 0.67 | 40.0 | 3.41e-01 | 86.6% | 36.3% |
| 2526355 | 7094.1.1.2 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › LIS_MGM1 | 0.63 | 38.0 | 3.49e-01 | 100.0% | 46.7% |
| 5061097 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.56 | 36.0 | 3.56e-01 | 75.6% | 62.4% |
| 3942501 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 34.0 | 3.36e-01 | 73.2% | 60.0% |
| 3283208 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.52 | 41.0 | 3.23e-01 | 85.4% | 74.3% |
| 4979765 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.52 | 42.0 | 4.28e-01 | 100.0% | 88.0% |
| 4968041 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.52 | 46.0 | 3.81e-01 | 98.8% | 64.8% |
| 4933483 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 35.0 | 3.54e-01 | 85.4% | 69.4% |
| 4937876 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.51 | 39.0 | 3.44e-01 | 84.1% | 91.2% |
| None | — | 0.50 | 34.0 | 3.45e-01 | 73.2% | 71.2% | |
| 4996031 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 36.0 | 3.63e-01 | 79.3% | 74.1% |
D2
medium
residues 88-138