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BML_coassembly_scaffold_35_prodigal-single.1__X__X__00010
Bact-VirBML_coassembly_scaffold_35_prodigal-single.1__X__X__00010
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-46
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jmxB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.83 | 50.0 | 2.91e-01 | 75.0% | 8.0% |
| 6az1g01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.81 | 49.0 | 2.92e-01 | 75.0% | 9.1% |
| 3ijcA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.80 | 51.0 | 2.97e-01 | 79.5% | 8.1% |
| 2cnxA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.80 | 50.0 | 2.93e-01 | 77.3% | 9.2% |
| 4aezA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.79 | 48.0 | 2.84e-01 | 75.0% | 8.3% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.78 | 48.0 | 2.84e-01 | 75.0% | 8.8% |
| 4zovB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.77 | 47.0 | 2.74e-01 | 75.0% | 7.2% |
| 8cukB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.77 | 47.0 | 2.76e-01 | 75.0% | 8.1% |
| 5h1kB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.76 | 49.0 | 2.88e-01 | 79.5% | 8.8% |
| 3odtA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.72 | 44.0 | 2.68e-01 | 75.0% | 9.1% |
| 4ubtD00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.69 | 47.0 | 2.76e-01 | 72.7% | 8.5% |
| 3sxxD02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 50.0 | 3.81e-01 | 79.5% | 38.5% |
| 3voqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 47.0 | 3.54e-01 | 77.3% | 28.4% |
| 1jrrA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.68 | 47.0 | 3.44e-01 | 75.0% | 59.8% |
| 1jmoA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.65 | 46.0 | 3.17e-01 | 75.0% | 61.3% |
| 7by6B04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.65 | 52.0 | 3.24e-01 | 97.7% | 16.5% |
| 4uv3E01 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.64 | 46.0 | 2.93e-01 | 75.0% | 27.6% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 43.0 | 2.46e-01 | 75.0% | 6.5% |
| 1attA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.64 | 46.0 | 3.23e-01 | 77.3% | 59.3% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.63 | 49.0 | 3.81e-01 | 100.0% | 38.8% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.63 | 44.0 | 2.99e-01 | 77.3% | 84.0% |
| 5ywwA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 54.0 | 3.55e-01 | 100.0% | 91.4% |
| 2xe4A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 46.0 | 2.78e-01 | 86.4% | 21.7% |
| 4nspA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.62 | 44.0 | 2.77e-01 | 77.3% | 15.1% |
| 3bghB01 | 3.30.160.180 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Putative neuraminyllactose-binding hemagglutinin homolog like domain | 0.60 | 49.0 | 3.33e-01 | 95.5% | 67.8% |
| 4lduA02 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.60 | 42.0 | 3.23e-01 | 75.0% | 33.0% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.59 | 46.0 | 4.61e-01 | 88.6% | 95.7% |
| 3loyA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 46.0 | 3.51e-01 | 88.6% | 45.6% |
| 3j7aZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.59 | 41.0 | 3.63e-01 | 77.3% | 77.8% |
| 2i5tA00 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.57 | 38.0 | 2.64e-01 | 70.5% | 42.0% |
| 8siuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 51.0 | 2.96e-01 | 100.0% | 22.0% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.57 | 41.0 | 2.92e-01 | 77.3% | 26.8% |
| 7f79A01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.57 | 43.0 | 3.01e-01 | 88.6% | 49.4% |
| 1vclA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 49.0 | 3.37e-01 | 100.0% | 43.6% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.55 | 44.0 | 3.22e-01 | 97.7% | 53.6% |
| 1b7yB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 38.0 | 2.60e-01 | 79.5% | 17.8% |
| 7k98B04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 39.0 | 2.52e-01 | 81.8% | 15.2% |
| 2vpjA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.54 | 38.0 | 2.40e-01 | 77.3% | 12.1% |
| 2gj3A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 38.0 | 2.91e-01 | 77.3% | 36.1% |
| 7a6pB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 37.0 | 2.77e-01 | 77.3% | 31.2% |
| 2r78C00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 36.0 | 2.87e-01 | 79.5% | 33.6% |
| 5nfiB02 | 2.60.40.2090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 2.93e-01 | 90.9% | 57.9% |
| 6pwkA02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.52 | 40.0 | 2.58e-01 | 88.6% | 48.1% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 40.0 | 3.67e-01 | 100.0% | 67.1% |
| 5khaB01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.52 | 38.0 | 2.57e-01 | 100.0% | 30.4% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 43.0 | 3.53e-01 | 97.7% | 94.0% |
| 1z87A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 36.0 | 2.90e-01 | 79.5% | 45.0% |
| 1xe4A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 37.0 | 2.60e-01 | 81.8% | 26.2% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4000086 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.77 | 48.0 | 2.59e-01 | 77.3% | 3.2% |
| 3257782 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 50.0 | 3.96e-01 | 75.0% | 37.1% |
| 3849724 | 5.1.11.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 | 0.70 | 49.0 | 2.77e-01 | 75.0% | 7.3% |
| 3826506 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 52.0 | 3.17e-01 | 93.2% | 12.6% |
| 4236172 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.69 | 48.0 | 3.65e-01 | 72.7% | 52.6% |
| 4946201 | 239.5.1.0 ↗ | beta barrels › Ribosomal protein L25-like › 40S ribosomal protein S3A N-terminal domain › 40S ribosomal protein S3A N-terminal domain | 0.68 | 50.0 | 4.41e-01 | 79.5% | 55.4% |
| 4549700 | 7556.1.1.1 ↗ | a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C | 0.68 | 49.0 | 2.85e-01 | 79.5% | 9.6% |
| 3675472 | 5.1.5.45 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PROPPIN | 0.68 | 47.0 | 2.98e-01 | 75.0% | 14.5% |
| None | — | 0.67 | 47.0 | 2.71e-01 | 75.0% | 8.4% | |
| 3377093 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.66 | 53.0 | 3.84e-01 | 90.9% | 33.6% |
| 4142588 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.66 | 49.0 | 3.28e-01 | 81.8% | 22.7% |
| 3339170 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.66 | 47.0 | 2.78e-01 | 75.0% | 10.3% |
| None | — | 0.66 | 46.0 | 2.67e-01 | 75.0% | 8.1% | |
| 3389626 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.65 | 51.0 | 4.39e-01 | 97.7% | 53.3% |
| 4119667 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.64 | 45.0 | 3.71e-01 | 77.3% | 95.3% |
| 5040976 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.64 | 47.0 | 3.01e-01 | 79.5% | 17.5% |
| 3664438 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.64 | 45.0 | 2.69e-01 | 75.0% | 10.2% |
| 3898471 | 10.1.1.8 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY | 0.63 | 52.0 | 3.54e-01 | 100.0% | 73.0% |
| 3679236 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.63 | 50.0 | 2.90e-01 | 88.6% | 9.3% |
| 5082807 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.63 | 44.0 | 3.34e-01 | 77.3% | 36.5% |
| 3476563 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 43.0 | 3.21e-01 | 93.2% | 27.5% |
| 3659202 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.61 | 44.0 | 3.71e-01 | 79.5% | 46.3% |
| 3694825 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.61 | 44.0 | 2.56e-01 | 79.5% | 8.2% |
| 5069904 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.61 | 52.0 | 3.70e-01 | 100.0% | 32.1% |
| 3311424 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.61 | 48.0 | 2.88e-01 | 88.6% | 12.6% |
| 3913149 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.61 | 46.0 | 3.28e-01 | 86.4% | 33.3% |
| 3928754 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.61 | 45.0 | 2.77e-01 | 84.1% | 12.1% |
| 3632043 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.60 | 51.0 | 3.98e-01 | 100.0% | 49.5% |
| 4977455 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 47.0 | 2.98e-01 | 93.2% | 54.5% |
| 3689291 | 220.1.1.69 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114 | 0.60 | 49.0 | 3.46e-01 | 97.7% | 86.5% |
| 4354151 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.60 | 42.0 | 3.17e-01 | 75.0% | 33.3% |
| 3677504 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.60 | 46.0 | 3.46e-01 | 88.6% | 31.2% |
| 3187098 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.59 | 44.0 | 2.62e-01 | 84.1% | 22.5% |
| 3734046 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.59 | 42.0 | 2.51e-01 | 79.5% | 20.8% |
| 4651524 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.59 | 41.0 | 3.03e-01 | 75.0% | 30.4% |
| 4011824 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.58 | 44.0 | 2.64e-01 | 90.9% | 10.3% |
| 3636263 | 5.1.3.137 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_2, Kelch_KLHDC2_KLHL20_DRC7 | 0.58 | 45.0 | 2.76e-01 | 100.0% | 32.2% |
| 3194847 | 3343.1.1.2 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal | 0.58 | 44.0 | 2.45e-01 | 88.6% | 27.3% |
| 3898432 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.58 | 44.0 | 3.67e-01 | 93.2% | 44.4% |
| 3697992 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.57 | 42.0 | 2.60e-01 | 84.1% | 22.1% |
| 5077248 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 38.0 | 3.60e-01 | 86.4% | 56.4% |
| 4472063 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.57 | 41.0 | 3.07e-01 | 77.3% | 32.7% |
| 3737921 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.57 | 42.0 | 2.49e-01 | 86.4% | 14.4% |
| 4992847 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 45.0 | 3.97e-01 | 97.7% | 100.0% |
| 4031480 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 47.0 | 3.80e-01 | 97.7% | 87.8% |
| 3892129 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.56 | 41.0 | 3.06e-01 | 86.4% | 35.0% |
| 4945086 | 239.5.1.0 ↗ | beta barrels › Ribosomal protein L25-like › 40S ribosomal protein S3A N-terminal domain › 40S ribosomal protein S3A N-terminal domain | 0.56 | 42.0 | 3.76e-01 | 100.0% | 54.3% |
| 4298591 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.56 | 43.0 | 2.97e-01 | 84.1% | 87.6% |
| 3780897 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.56 | 39.0 | 2.47e-01 | 72.7% | 16.4% |
| 4381766 | 220.1.1.54 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_18 | 0.55 | 42.0 | 2.95e-01 | 90.9% | 25.3% |
| 4106397 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 41.0 | 3.62e-01 | 93.2% | 52.0% |
| 3735485 | 5.1.4.143 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF6454 | 0.54 | 42.0 | 2.63e-01 | 97.7% | 29.5% |
| 4980698 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 40.0 | 3.06e-01 | 88.6% | 32.8% |
| 3170963 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.54 | 38.0 | 2.88e-01 | 75.0% | 74.6% |
| 4108520 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.53 | 44.0 | 3.21e-01 | 100.0% | 46.7% |
| 4937095 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.53 | 42.0 | 3.20e-01 | 93.2% | 77.4% |
| 4606362 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 45.0 | 3.68e-01 | 97.7% | 92.9% |
| 3221077 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 41.0 | 3.52e-01 | 93.2% | 51.2% |
| 4524884 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.53 | 46.0 | 2.75e-01 | 100.0% | 17.0% |
| 3484018 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 42.0 | 2.50e-01 | 100.0% | 33.3% |
| 3283015 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.52 | 40.0 | 3.02e-01 | 88.6% | 33.3% |
| 4931757 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 39.0 | 3.04e-01 | 90.9% | 36.7% |
| 4464658 | 274.1.1.59 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGG | 0.52 | 41.0 | 3.14e-01 | 93.2% | 39.5% |
| 3500942 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.51 | 40.0 | 3.17e-01 | 95.5% | 43.6% |
| 4101190 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 39.0 | 3.45e-01 | 93.2% | 57.3% |
| 3993275 | 109.2.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Prenyltrans | 0.51 | 35.0 | 2.17e-01 | 77.3% | 9.9% |
| 3852566 | 5.1.3.147 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Beta-prop_ATRN-LZTR1 | 0.51 | 40.0 | 2.53e-01 | 100.0% | 29.1% |
| 3669262 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.51 | 34.0 | 2.07e-01 | 72.7% | 11.5% |
| 3625971 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.51 | 41.0 | 3.01e-01 | 100.0% | 56.6% |
| 3647962 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.50 | 40.0 | 2.94e-01 | 100.0% | 54.5% |
| 4957326 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.50 | 34.0 | 2.32e-01 | 75.0% | 15.5% |
D2
high
residues 55-174
Domain cluster:
rep: 5H_04062016_scaffold_1_prodigal-single.1__X__X__00437__D55-187
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06067.17 best | DUF932 | 38.8 | 1.30e-09 | 98.3% | 43.2% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 42.0 | 4.24e-01 | 70.0% | 92.7% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.62 | 40.0 | 3.83e-01 | 82.5% | 55.6% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.60 | 43.0 | 3.85e-01 | 85.0% | 52.4% |
| 1oygA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 52.0 | 3.54e-01 | 95.8% | 85.3% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.59 | 31.0 | 3.55e-01 | 79.2% | 69.0% |
| 3obqA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.58 | 52.0 | 4.96e-01 | 100.0% | 90.1% |
| 1mmuA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 44.0 | 3.23e-01 | 80.8% | 99.4% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.58 | 38.0 | 3.81e-01 | 86.7% | 64.0% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.57 | 51.0 | 4.84e-01 | 100.0% | 87.1% |
| 3sc7X01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 48.0 | 3.53e-01 | 95.0% | 50.0% |
| 6p2kB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 50.0 | 3.53e-01 | 98.3% | 95.2% |
| 3g0kA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 40.0 | 3.94e-01 | 74.2% | 100.0% |
| 1pbyB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 44.0 | 3.21e-01 | 87.5% | 75.7% |
| 3f7sA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 38.0 | 3.59e-01 | 72.5% | 93.0% |
| 3kspA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 36.0 | 3.55e-01 | 70.0% | 89.1% |
| 1v0fA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.52 | 46.0 | 3.35e-01 | 99.2% | 57.6% |
| 2i99A01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.52 | 43.0 | 4.02e-01 | 90.8% | 78.0% |
| 6iy8A01 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.51 | 36.0 | 3.16e-01 | 72.5% | 60.8% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.51 | 43.0 | 4.03e-01 | 92.5% | 77.2% |
| 3hdjA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.51 | 43.0 | 4.10e-01 | 92.5% | 84.3% |
| 2w7vA00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.51 | 33.0 | 3.82e-01 | 76.7% | 93.9% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.51 | 43.0 | 3.52e-01 | 95.8% | 61.6% |
| 5hl8C00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.50 | 31.0 | 3.70e-01 | 79.2% | 94.9% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941745 | 241.15.1.4 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › DUF932 | 0.70 | 61.0 | 5.73e-01 | 93.3% | 86.2% |
| 4940463 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.65 | 53.0 | 5.09e-01 | 86.7% | 77.8% |
| 3408261 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.65 | 44.0 | 4.25e-01 | 70.0% | 81.3% |
| 3397367 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.64 | 56.0 | 5.09e-01 | 98.3% | 93.3% |
| 3228525 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.64 | 53.0 | 5.46e-01 | 100.0% | 99.1% |
| 4129534 | 5.1.4.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,CAF1C_H4-bd | 0.62 | 45.0 | 3.13e-01 | 74.2% | 30.1% |
| 6411 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.62 | 42.0 | 4.24e-01 | 70.0% | 92.7% |
| 3484227 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.61 | 55.0 | 4.95e-01 | 100.0% | 75.9% |
| 3515197 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.60 | 54.0 | 4.81e-01 | 100.0% | 74.1% |
| 3875809 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.60 | 53.0 | 4.84e-01 | 100.0% | 76.4% |
| 4466411 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.59 | 54.0 | 4.75e-01 | 100.0% | 75.4% |
| 3056279 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.59 | 53.0 | 4.80e-01 | 100.0% | 76.1% |
| 4247645 | 5.1.4.317 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CAF1C_H4-bd, Beta-prop_NOL10_N | 0.59 | 42.0 | 2.88e-01 | 74.2% | 29.2% |
| 3687746 | 5.1.4.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,CAF1C_H4-bd | 0.59 | 42.0 | 2.86e-01 | 74.2% | 29.1% |
| 3365246 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.58 | 40.0 | 3.54e-01 | 72.5% | 49.4% |
| 3633470 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.58 | 51.0 | 5.07e-01 | 99.2% | 100.0% |
| 3552040 | 4099.1.1.30 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_C | 0.58 | 52.0 | 4.91e-01 | 100.0% | 97.9% |
| 4403206 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.57 | 49.0 | 4.55e-01 | 98.3% | 74.2% |
| 4940119 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.55 | 40.0 | 3.68e-01 | 79.2% | 58.7% |
| 4984586 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.54 | 39.0 | 4.12e-01 | 85.8% | 82.7% |
| 3385471 | 4998.1.1.0 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain | 0.54 | 42.0 | 3.95e-01 | 91.7% | 68.3% |
| 3601982 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 45.0 | 3.20e-01 | 92.5% | 88.6% |
| 3468093 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.54 | 41.0 | 4.53e-01 | 85.8% | 100.0% |
| 3245973 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 43.0 | 2.97e-01 | 90.0% | 85.1% |
| 3164281 | 5069.1.1.92 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › CcmF_C | 0.53 | 39.0 | 4.23e-01 | 91.7% | 94.0% |
| 3270456 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.52 | 44.0 | 3.77e-01 | 91.7% | 72.8% |
| 3841716 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.52 | 41.0 | 3.74e-01 | 82.5% | 92.9% |
| 3400513 | 77.1.1.4 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Chitin_bind_4 | 0.52 | 34.0 | 3.94e-01 | 76.7% | 100.0% |
| 3474976 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.52 | 38.0 | 3.76e-01 | 95.0% | 70.8% |
| 3583345 | 5.1.4.288 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N | 0.52 | 42.0 | 2.92e-01 | 90.0% | 78.0% |
| 3381230 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.52 | 39.0 | 3.98e-01 | 80.0% | 83.5% |
| 4888997 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.51 | 45.0 | 3.14e-01 | 96.7% | 47.1% |
| 3455522 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 42.0 | 3.08e-01 | 90.8% | 91.0% |
| 5047424 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.50 | 36.0 | 3.66e-01 | 90.8% | 74.2% |
| 3707067 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.50 | 42.0 | 3.43e-01 | 90.0% | 94.2% |
| 3666444 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.50 | 44.0 | 3.84e-01 | 97.5% | 73.5% |
| 3681942 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.50 | 44.0 | 3.64e-01 | 98.3% | 79.6% |
| 3415714 | 79.1.1.23 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Chitin_bind_4 | 0.50 | 31.0 | 3.75e-01 | 80.0% | 97.3% |
| 4997740 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.50 | 38.0 | 3.59e-01 | 90.8% | 67.1% |
| 5047928 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.50 | 37.0 | 3.74e-01 | 77.5% | 85.8% |
D3
high
residues 182-287
Domain cluster:
rep: gwf1_scaffold_41_prodigal-single.1__X__X__00175__D182-277
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.67 | 49.0 | 5.44e-01 | 94.3% | 100.0% |
| 2jgdA03 | 3.40.50.12470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 37.0 | 2.86e-01 | 100.0% | 24.3% |
| 2k3qA00 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.63 | 52.0 | 5.09e-01 | 98.1% | 81.4% |
| 6xpdA01 | 1.20.1510.10 | Mainly Alpha › Up-down Bundle › Alpha-lytic protease prodomain-like › Cation efflux protein transmembrane domain | 0.58 | 45.0 | 3.64e-01 | 82.1% | 92.1% |
| 5y6qB02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.58 | 40.0 | 4.07e-01 | 99.1% | 72.6% |
| 4yozA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 49.0 | 4.12e-01 | 95.3% | 61.1% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.55 | 48.0 | 4.22e-01 | 98.1% | 90.7% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.54 | 46.0 | 4.10e-01 | 96.2% | 91.1% |
| 3owaA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 38.0 | 3.30e-01 | 75.5% | 93.6% |
| 4q2cA01 | 1.10.3210.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.53 | 37.0 | 2.83e-01 | 71.7% | 95.8% |
| 1ichA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.52 | 36.0 | 3.90e-01 | 100.0% | 88.5% |
| 2jfrA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.51 | 46.0 | 3.52e-01 | 97.2% | 62.0% |
| 4cs9B02 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.51 | 33.0 | 3.37e-01 | 96.2% | 65.4% |
| 1e2tA01 | 6.10.140.1930 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 33.0 | 3.87e-01 | 89.6% | 100.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033222 | 604.39.1.6 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › QueT | 0.70 | 61.0 | 5.42e-01 | 94.3% | 90.7% |
| 4016535 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.60 | 42.0 | 4.36e-01 | 94.3% | 77.0% |
| 3875701 | 274.1.1.38 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › Pecanex_C | 0.60 | 53.0 | 4.16e-01 | 100.0% | 93.6% |
| 3750756 | 101.1.4.70 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pecanex_C | 0.59 | 52.0 | 4.10e-01 | 100.0% | 68.5% |
| 4628855 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.58 | 41.0 | 3.41e-01 | 74.5% | 48.9% |
| 3940293 | 188.1.1.0 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain | 0.58 | 40.0 | 3.22e-01 | 71.7% | 37.3% |
| 3331252 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.56 | 39.0 | 4.19e-01 | 71.7% | 93.3% |
| 3701680 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.55 | 45.0 | 4.70e-01 | 95.3% | 97.0% |
| 3587918 | 4230.1.1.3 ↗ | alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 | 0.54 | 32.0 | 3.40e-01 | 71.7% | 64.2% |
| 3478957 | 195.1.1.0 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like | 0.53 | 42.0 | 3.86e-01 | 84.9% | 83.6% |
| 4391836 | 1197.1.1.1 ↗ | alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf | 0.52 | 42.0 | 3.42e-01 | 90.6% | 79.1% |
| 4978195 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 44.0 | 3.77e-01 | 100.0% | 78.9% |
| 4656508 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.51 | 43.0 | 3.36e-01 | 93.4% | 98.3% |
| 3715769 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.50 | 39.0 | 3.02e-01 | 84.0% | 64.3% |