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BML_coassembly_scaffold_35_prodigal-single.1__X__X__00030
Bact-VirBML_coassembly_scaffold_35_prodigal-single.1__X__X__00030
Identity
- Kingdom:
- phage
Quality
53.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-61
Domain cluster:
rep: OP292654.1__UYE98907.1__XbC2_507__00478__D116-176
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wzoA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.72 | 46.0 | 4.94e-01 | 100.0% | 80.0% |
| 3kbgA03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 56.0 | 5.45e-01 | 100.0% | 76.8% |
| 8b2gA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 52.0 | 4.96e-01 | 92.0% | 100.0% |
| 6az1E02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.64 | 43.0 | 4.35e-01 | 70.0% | 98.0% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 57.0 | 5.58e-01 | 100.0% | 96.3% |
| 3j7aF02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.64 | 43.0 | 4.30e-01 | 70.0% | 98.0% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 54.0 | 4.85e-01 | 100.0% | 72.0% |
| 6cz7A01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.64 | 42.0 | 4.00e-01 | 70.0% | 71.0% |
| 1m9sA03 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 53.0 | 4.71e-01 | 100.0% | 86.7% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 51.0 | 4.93e-01 | 100.0% | 82.1% |
| 4bpnW02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.61 | 41.0 | 4.11e-01 | 70.0% | 98.0% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 53.0 | 5.13e-01 | 100.0% | 96.6% |
| 1twfI02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.61 | 44.0 | 3.87e-01 | 78.0% | 75.0% |
| 1whjA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.60 | 51.0 | 4.16e-01 | 100.0% | 65.7% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 51.0 | 4.04e-01 | 98.0% | 46.8% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 49.0 | 4.73e-01 | 100.0% | 83.1% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 49.0 | 4.67e-01 | 100.0% | 80.6% |
| 6gmhI02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.59 | 41.0 | 3.78e-01 | 76.0% | 84.1% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 44.0 | 4.53e-01 | 100.0% | 93.6% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 41.0 | 3.65e-01 | 78.0% | 94.7% |
| 2v14A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 39.0 | 2.93e-01 | 72.0% | 31.3% |
| 3nbxX04 | 2.40.128.430 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 48.0 | 3.85e-01 | 100.0% | 67.3% |
| 2re3A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.57 | 46.0 | 4.23e-01 | 100.0% | 67.1% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 46.0 | 4.38e-01 | 100.0% | 85.5% |
| 1m4zA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.56 | 48.0 | 3.24e-01 | 100.0% | 48.0% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 42.0 | 3.87e-01 | 92.0% | 62.7% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 42.0 | 4.11e-01 | 88.0% | 89.3% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 44.0 | 4.11e-01 | 100.0% | 88.1% |
| 7r71A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 46.0 | 4.30e-01 | 100.0% | 76.6% |
| 3twlA01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.53 | 41.0 | 3.31e-01 | 100.0% | 58.3% |
| 6b4oA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 44.0 | 3.48e-01 | 100.0% | 95.8% |
| 1ej6B00 | 3.90.1830.10 | Alpha Beta › Alpha-Beta Complex › Inner capsid protein lambda-1 › Inner capsid protein lambda-1 | 0.53 | 43.0 | 2.35e-01 | 94.0% | 6.8% |
| 3o0hB02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 43.0 | 3.43e-01 | 100.0% | 97.4% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 39.0 | 3.62e-01 | 86.0% | 65.2% |
| 1eigA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 38.0 | 3.47e-01 | 84.0% | 61.6% |
| 2v3aA03 | 3.30.390.120 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.51 | 34.0 | 3.24e-01 | 96.0% | 54.7% |
| 1hyuA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 3.03e-01 | 100.0% | 57.1% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 37.0 | 3.65e-01 | 100.0% | 75.9% |
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.51 | 37.0 | 2.98e-01 | 82.0% | 41.3% |
| 2bi0A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 41.0 | 2.98e-01 | 94.0% | 88.9% |
| 3kkjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 42.0 | 3.00e-01 | 94.0% | 49.7% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5017637 | 4.1.1.458 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2098 | 0.83 | 62.0 | 6.07e-01 | 100.0% | 72.7% |
| 3713588 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 66.0 | 5.25e-01 | 100.0% | 63.2% |
| 4013287 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 54.0 | 5.17e-01 | 92.0% | 100.0% |
| 4629735 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 59.0 | 5.41e-01 | 100.0% | 75.4% |
| 4300449 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.67 | 58.0 | 5.34e-01 | 100.0% | 75.4% |
| 5065184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 48.0 | 4.99e-01 | 94.0% | 86.7% |
| 5022848 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 58.0 | 5.44e-01 | 100.0% | 81.7% |
| 4593997 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 57.0 | 5.27e-01 | 100.0% | 75.4% |
| 3556321 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.65 | 57.0 | 4.90e-01 | 100.0% | 78.8% |
| 4171942 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.65 | 57.0 | 4.50e-01 | 100.0% | 63.5% |
| 4971532 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 57.0 | 5.07e-01 | 100.0% | 70.0% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.64 | 56.0 | 5.17e-01 | 100.0% | 78.5% |
| 3501574 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.64 | 57.0 | 4.99e-01 | 100.0% | 84.0% |
| 3556601 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.64 | 58.0 | 5.27e-01 | 100.0% | 80.0% |
| 3779830 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.63 | 56.0 | 4.60e-01 | 100.0% | 57.8% |
| 3702915 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.62 | 55.0 | 5.18e-01 | 100.0% | 90.0% |
| 4000622 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.61 | 55.0 | 4.11e-01 | 100.0% | 43.3% |
| 3616769 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.61 | 54.0 | 4.37e-01 | 100.0% | 54.7% |
| 3687350 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 51.0 | 4.96e-01 | 100.0% | 87.3% |
| 3260945 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 51.0 | 4.88e-01 | 100.0% | 86.7% |
| 4957377 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.60 | 45.0 | 4.26e-01 | 100.0% | 68.3% |
| 2561577 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.59 | 42.0 | 3.99e-01 | 100.0% | 63.9% |
| 3241285 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 45.0 | 3.36e-01 | 88.0% | 94.5% |
| 3499652 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.58 | 54.0 | 3.26e-01 | 100.0% | 22.9% |
| 3441142 | 4.8.1.7 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SAWADEE | 0.58 | 47.0 | 4.60e-01 | 96.0% | 92.7% |
| 5053906 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.57 | 44.0 | 4.23e-01 | 100.0% | 76.7% |
| 5075469 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.56 | 48.0 | 4.47e-01 | 100.0% | 78.5% |
| 3921926 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 44.0 | 3.51e-01 | 96.0% | 44.2% |
| 3593607 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 44.0 | 4.28e-01 | 100.0% | 83.6% |
| 3918252 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 37.0 | 3.93e-01 | 94.0% | 83.7% |
| 4176256 | 2003.1.2.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.54 | 44.0 | 3.06e-01 | 98.0% | 55.0% |
| 4659931 | 2003.1.2.99 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, FAD_binding_3 | 0.54 | 45.0 | 2.81e-01 | 100.0% | 40.6% |
| 4055924 | 223.1.1.76 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_7 | 0.54 | 43.0 | 3.26e-01 | 92.0% | 66.9% |
| 4359927 | 2003.1.2.99 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, FAD_binding_3 | 0.54 | 45.0 | 3.13e-01 | 100.0% | 70.8% |
| 5035835 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.54 | 46.0 | 4.42e-01 | 100.0% | 88.3% |
| 4288670 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.53 | 45.0 | 2.78e-01 | 100.0% | 46.8% |
| None | — | 0.53 | 43.0 | 2.63e-01 | 100.0% | 48.1% | |
| 3679125 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 34.0 | 2.48e-01 | 70.0% | 27.8% |
| 3206852 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.52 | 41.0 | 2.65e-01 | 96.0% | 17.0% |
| 4071824 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.52 | 43.0 | 3.86e-01 | 100.0% | 69.3% |
| 4188685 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 44.0 | 2.82e-01 | 100.0% | 46.2% |
| 3343842 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.52 | 43.0 | 2.58e-01 | 98.0% | 37.1% |
| 4011138 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 44.0 | 2.59e-01 | 100.0% | 48.1% |
| 3592332 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 41.0 | 3.40e-01 | 100.0% | 60.0% |
| 3990001 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.51 | 38.0 | 3.83e-01 | 100.0% | 86.8% |
| 3681719 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.50 | 44.0 | 2.69e-01 | 100.0% | 51.2% |
D2
medium
residues 66-137_157-185