Back to structures

BML_coassembly_scaffold_35_prodigal-single.1__X__X__00034

Bact-Vir

BML_coassembly_scaffold_35_prodigal-single.1__X__X__00034

Identity

Kingdom:
phage

Quality

82.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 40-163
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 30.0 3.86e-01 71.8% 78.6%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.58 35.0 3.37e-01 80.6% 51.4%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.57 31.0 3.16e-01 74.2% 53.7%
1qhlA00 3.40.1140.10 Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › 0.52 36.0 3.06e-01 73.4% 43.8%
2hngA00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.51 35.0 3.53e-01 78.2% 68.0%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 36.0 3.46e-01 76.6% 62.7%
2n8xA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.51 36.0 3.26e-01 71.8% 66.3%
3wa5B00 2.60.120.1690 Mainly Beta › Sandwich › Jelly Rolls › 0.50 28.0 2.85e-01 72.6% 53.2%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3487339 223.2.1.6 a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.59 41.0 3.58e-01 79.8% 48.4%
4551342 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.58 32.0 3.74e-01 72.6% 77.6%
3275143 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.57 37.0 3.32e-01 80.6% 47.6%
3993477 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 40.0 3.38e-01 80.6% 44.5%
3851439 5.1.4.612 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Med16_N, Med16_bridge, Med16_C 0.56 39.0 2.50e-01 71.0% 30.2%
3995523 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.56 40.0 3.56e-01 80.6% 53.5%
3682179 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.56 42.0 3.55e-01 79.8% 48.6%
3790745 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.56 38.0 3.34e-01 80.6% 47.0%
3758281 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.55 36.0 3.22e-01 76.6% 45.6%
3935986 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.55 42.0 3.65e-01 79.8% 76.4%
3623034 223.2.1.6 a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.55 42.0 3.69e-01 81.5% 66.8%
3780384 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.55 44.0 3.61e-01 85.5% 64.4%
3526610 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.55 43.0 3.69e-01 84.7% 73.2%
3527281 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.54 36.0 3.15e-01 76.6% 44.3%
3249225 223.2.1.6 a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.54 41.0 3.73e-01 80.6% 60.0%
3536044 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.54 43.0 3.49e-01 84.7% 76.2%
3260215 223.2.1.22 a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.53 39.0 3.26e-01 75.8% 69.8%
3268156 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.53 43.0 3.82e-01 88.7% 61.1%
3840079 4998.1.1.1 beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 0.53 33.0 3.13e-01 72.6% 52.0%
3182154 223.2.1.6 a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.52 39.0 3.23e-01 78.2% 67.3%
3743823 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.52 39.0 3.26e-01 80.6% 46.7%
3402459 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.52 40.0 3.50e-01 83.1% 65.3%
3685453 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.52 39.0 3.28e-01 79.0% 67.3%
3850124 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.51 39.0 3.30e-01 79.8% 71.7%
3499174 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.51 39.0 3.28e-01 80.6% 67.4%