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BML_coassembly_scaffold_35_prodigal-single.1__X__X__00167
Bact-VirBML_coassembly_scaffold_35_prodigal-single.1__X__X__00167
Identity
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-112
Domain cluster:
rep: MZ820085.1__QZE10425.1__SEA_SCOOBYDOOBYDOO_74__00074__D325-431
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00583.32 best | Acetyltransf_1 | 38.9 | 1.30e-09 | 87.9% | 56.0% |
| PF13508.14 | Acetyltransf_7 | 34.8 | 2.50e-08 | 76.8% | 57.1% |
D2
high
residues 121-193
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 48.0 | 5.02e-01 | 76.7% | 95.5% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 46.0 | 5.01e-01 | 74.0% | 87.1% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 43.0 | 4.58e-01 | 71.2% | 87.7% |
| 1ne8A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 49.0 | 4.24e-01 | 86.3% | 84.5% |
| 3jscA00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 47.0 | 4.34e-01 | 82.2% | 82.3% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 43.0 | 4.66e-01 | 72.6% | 100.0% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 43.0 | 4.37e-01 | 72.6% | 85.7% |
| 1x43A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 43.0 | 4.56e-01 | 72.6% | 96.8% |
| 1vx7N01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 52.0 | 4.98e-01 | 94.5% | 94.1% |
| 7k9cA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 53.0 | 5.04e-01 | 97.3% | 100.0% |
| 5f3yA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 53.0 | 5.22e-01 | 98.6% | 100.0% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.60 | 39.0 | 4.41e-01 | 71.2% | 90.7% |
| 2epdA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 41.0 | 4.12e-01 | 72.6% | 76.3% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.60 | 39.0 | 4.30e-01 | 71.2% | 84.7% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.59 | 41.0 | 4.51e-01 | 98.6% | 98.1% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 42.0 | 4.61e-01 | 89.0% | 100.0% |
| 3pvlA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 50.0 | 5.02e-01 | 100.0% | 98.7% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 41.0 | 4.27e-01 | 75.3% | 88.2% |
| 1udlA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 44.0 | 4.06e-01 | 83.6% | 62.2% |
| 2dlpA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 45.0 | 4.31e-01 | 84.9% | 75.3% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 4.15e-01 | 98.6% | 81.2% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 39.0 | 4.20e-01 | 71.2% | 95.0% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.57 | 43.0 | 4.25e-01 | 97.3% | 76.6% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 4.24e-01 | 75.3% | 89.2% |
| 4cc2A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 44.0 | 4.65e-01 | 89.0% | 98.4% |
| 2x5gA00 | 3.30.720.60 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.56 | 36.0 | 3.42e-01 | 100.0% | 52.7% |
| 3nmzD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 44.0 | 4.25e-01 | 89.0% | 78.6% |
| 6r8gB02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.55 | 41.0 | 3.27e-01 | 83.6% | 77.6% |
| 1ug1A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 45.0 | 4.23e-01 | 93.2% | 75.0% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 3.85e-01 | 95.9% | 81.8% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 43.0 | 2.94e-01 | 98.6% | 93.8% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 42.0 | 4.19e-01 | 89.0% | 89.3% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.52 | 35.0 | 3.71e-01 | 84.9% | 85.0% |
| 3pmiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 41.0 | 4.24e-01 | 100.0% | 100.0% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 41.0 | 4.26e-01 | 89.0% | 98.5% |
| 2c0cA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.52 | 41.0 | 3.27e-01 | 93.2% | 91.4% |
| 1p9oA00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.52 | 39.0 | 2.83e-01 | 89.0% | 98.1% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.27e-01 | 75.3% | 64.8% |
| 5jeaD00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.51 | 45.0 | 3.23e-01 | 98.6% | 96.0% |
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 41.0 | 4.12e-01 | 93.2% | 96.1% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4640515 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.71 | 43.0 | 5.01e-01 | 89.0% | 88.0% |
| 3675341 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.71 | 45.0 | 5.05e-01 | 74.0% | 85.5% |
| 3436022 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.70 | 44.0 | 5.01e-01 | 74.0% | 85.5% |
| 3710823 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 45.0 | 5.16e-01 | 72.6% | 94.0% |
| 4534931 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.70 | 43.0 | 4.29e-01 | 71.2% | 60.0% |
| 3821919 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.70 | 43.0 | 4.75e-01 | 71.2% | 76.7% |
| 4367301 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 47.0 | 5.21e-01 | 72.6% | 94.5% |
| 4986869 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.68 | 47.0 | 3.41e-01 | 72.6% | 29.3% |
| 4031578 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 40.0 | 4.62e-01 | 89.0% | 86.0% |
| 4680376 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.67 | 43.0 | 4.82e-01 | 83.6% | 87.3% |
| 3164773 | 4038.1.1.8 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Abc1-like | 0.66 | 47.0 | 4.41e-01 | 75.3% | 100.0% |
| 3517415 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.64 | 46.0 | 4.89e-01 | 76.7% | 90.8% |
| 3485667 | 4.1.1.99 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_10 | 0.64 | 45.0 | 4.49e-01 | 74.0% | 76.0% |
| 3456496 | 4.1.1.75 ↗ | beta barrels › SH3 › SH3 › SH3 › NdhS | 0.64 | 51.0 | 4.41e-01 | 100.0% | 55.7% |
| 4483819 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.63 | 43.0 | 4.45e-01 | 71.2% | 81.4% |
| 5024147 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.63 | 48.0 | 2.97e-01 | 83.6% | 14.8% |
| 3998645 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.63 | 43.0 | 4.53e-01 | 71.2% | 86.2% |
| 4056584 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 46.0 | 4.49e-01 | 78.1% | 76.2% |
| 3548244 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.62 | 43.0 | 4.64e-01 | 72.6% | 98.3% |
| 3771628 | 189.1.1.0 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP | 0.61 | 42.0 | 2.82e-01 | 72.6% | 19.7% |
| 3391702 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.61 | 42.0 | 4.10e-01 | 71.2% | 71.2% |
| 3184612 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 4.09e-01 | 71.2% | 90.0% |
| 4942163 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 47.0 | 4.95e-01 | 98.6% | 93.8% |
| 3888226 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.61 | 43.0 | 4.27e-01 | 74.0% | 82.7% |
| 4484893 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 46.0 | 4.86e-01 | 100.0% | 92.3% |
| 4467360 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 46.0 | 4.97e-01 | 100.0% | 100.0% |
| 3516244 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.60 | 42.0 | 4.10e-01 | 74.0% | 73.8% |
| 3539094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 49.0 | 4.78e-01 | 91.8% | 96.2% |
| 4018455 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.59 | 44.0 | 2.95e-01 | 79.5% | 40.3% |
| 3931419 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.59 | 47.0 | 4.48e-01 | 86.3% | 78.8% |
| 3417443 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.59 | 47.0 | 4.85e-01 | 97.3% | 92.8% |
| 3399284 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.59 | 45.0 | 4.77e-01 | 93.2% | 95.4% |
| 3883895 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.59 | 50.0 | 4.60e-01 | 100.0% | 84.0% |
| 3696092 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.59 | 47.0 | 4.86e-01 | 97.3% | 94.3% |
| 4151014 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.58 | 39.0 | 4.14e-01 | 89.0% | 83.3% |
| 3570230 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.58 | 50.0 | 4.75e-01 | 100.0% | 87.8% |
| 3604145 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 43.0 | 4.64e-01 | 100.0% | 98.3% |
| 3566206 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 44.0 | 4.51e-01 | 83.6% | 87.1% |
| 2121553 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 47.0 | 4.83e-01 | 91.8% | 98.6% |
| 5001903 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 43.0 | 4.46e-01 | 100.0% | 87.1% |
| 3317929 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.57 | 46.0 | 4.23e-01 | 100.0% | 66.0% |
| 3269589 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.57 | 43.0 | 4.38e-01 | 89.0% | 84.3% |
| 4133335 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.57 | 42.0 | 4.57e-01 | 89.0% | 96.7% |
| 4610859 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.57 | 44.0 | 4.63e-01 | 87.7% | 95.4% |
| 4953054 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 43.0 | 4.28e-01 | 100.0% | 81.3% |
| 3487686 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 42.0 | 4.01e-01 | 89.0% | 68.2% |
| 4020558 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 44.0 | 4.61e-01 | 98.6% | 96.9% |
| 3585447 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.56 | 45.0 | 4.43e-01 | 98.6% | 82.5% |
| 3599257 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 42.0 | 4.38e-01 | 89.0% | 90.8% |
| 3554994 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.56 | 43.0 | 4.11e-01 | 89.0% | 70.8% |
| 4104821 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.55 | 40.0 | 4.04e-01 | 82.2% | 77.3% |
| 3333152 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.55 | 47.0 | 4.59e-01 | 100.0% | 88.7% |
| 3920897 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.54 | 43.0 | 4.26e-01 | 89.0% | 84.0% |
| 3385696 | 854.1.1.0 ↗ | extended segments › Outer membrane virulence protein yopE › Outer membrane virulence protein yopE › Outer membrane virulence protein yopE | 0.54 | 43.0 | 4.20e-01 | 89.0% | 92.4% |
| 3248342 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.53 | 42.0 | 4.40e-01 | 93.2% | 100.0% |
| 5033892 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 38.0 | 4.04e-01 | 91.8% | 90.8% |
| 3522694 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.52 | 42.0 | 3.85e-01 | 93.2% | 68.4% |
| 3706686 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.51 | 37.0 | 3.89e-01 | 93.2% | 89.2% |
| 4938705 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.51 | 35.0 | 2.79e-01 | 71.2% | 92.9% |
| 3527248 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.51 | 43.0 | 4.38e-01 | 100.0% | 100.0% |
| None | — | 0.50 | 38.0 | 3.91e-01 | 100.0% | 87.1% |