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BML_coassembly_scaffold_35_prodigal-single.1__X__X__00311
Bact-VirBML_coassembly_scaffold_35_prodigal-single.1__X__X__00311
Identity
- Kingdom:
- phage
Quality
74.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-79
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 51.0 | 5.25e-01 | 100.0% | 94.4% |
| 8gz3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 54.0 | 5.17e-01 | 97.4% | 100.0% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 55.0 | 5.41e-01 | 100.0% | 95.3% |
| 2zzeA03 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 53.0 | 4.95e-01 | 100.0% | 76.5% |
| 5eanA01 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 53.0 | 4.82e-01 | 100.0% | 90.7% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 52.0 | 4.96e-01 | 98.7% | 93.4% |
| 1rl1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 48.0 | 4.61e-01 | 90.9% | 97.8% |
| 4nzdB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.74e-01 | 100.0% | 79.8% |
| 2h5eA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 50.0 | 4.02e-01 | 98.7% | 51.8% |
| 2mx2A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 47.0 | 4.70e-01 | 100.0% | 86.4% |
| 3k9tA02 | 3.50.30.90 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Domain of unknown function DUF2172 | 0.58 | 40.0 | 3.75e-01 | 72.7% | 93.8% |
| 1wxqA03 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.57 | 43.0 | 4.45e-01 | 98.7% | 88.9% |
| 3fkuS02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 4.35e-01 | 97.4% | 87.4% |
| 1a21A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 4.35e-01 | 100.0% | 73.5% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 40.0 | 4.13e-01 | 76.6% | 95.9% |
| 4g5aA00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 43.0 | 4.05e-01 | 94.8% | 66.7% |
| 2dl9A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 4.44e-01 | 100.0% | 80.9% |
| 5eo9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 4.33e-01 | 100.0% | 81.3% |
| 4fvdA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 42.0 | 3.97e-01 | 84.4% | 75.5% |
| 2e5eA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 4.18e-01 | 96.1% | 79.2% |
| 3lqmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 4.13e-01 | 97.4% | 75.6% |
| 3zssA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 44.0 | 4.24e-01 | 100.0% | 78.9% |
| 4nzjA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 41.0 | 3.99e-01 | 100.0% | 74.7% |
| 7sf2A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 4.22e-01 | 96.1% | 79.6% |
| 4h8wC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 4.05e-01 | 97.4% | 84.0% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.53 | 32.0 | 3.71e-01 | 70.1% | 94.0% |
| 2xy1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 4.20e-01 | 100.0% | 83.5% |
| 2w3sB01 | 3.90.1170.50 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead | 0.52 | 40.0 | 3.55e-01 | 87.0% | 69.9% |
| 4dohE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 4.08e-01 | 100.0% | 77.6% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.89e-01 | 97.4% | 84.6% |
| 1f97A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.96e-01 | 100.0% | 77.1% |
| 1epfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.88e-01 | 94.8% | 84.4% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5003300 | 1.1.4.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C | 0.84 | 77.0 | 7.44e-01 | 100.0% | 95.3% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 57.0 | 5.77e-01 | 100.0% | 92.0% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 56.0 | 5.80e-01 | 100.0% | 98.6% |
| 5053509 | 221.7.1.0 ↗ | a+b two layers › beta-Grasp › E2-binding domain of E1 › E2-binding domain of E1 | 0.65 | 57.0 | 5.34e-01 | 100.0% | 80.0% |
| 3249579 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 50.0 | 5.08e-01 | 97.4% | 86.7% |
| 3295299 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.65 | 57.0 | 5.34e-01 | 100.0% | 85.3% |
| 4231688 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 56.0 | 5.23e-01 | 100.0% | 97.0% |
| 3549461 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.64 | 53.0 | 4.43e-01 | 97.4% | 66.0% |
| 3272448 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.63 | 56.0 | 5.25e-01 | 100.0% | 86.3% |
| 1030933 | 1.1.7.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel | 0.63 | 55.0 | 5.29e-01 | 100.0% | 91.0% |
| 3263967 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 52.0 | 5.01e-01 | 98.7% | 81.1% |
| 3571974 | 1.1.7.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Dna2_Rift | 0.62 | 53.0 | 4.77e-01 | 100.0% | 85.2% |
| 3028388 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.61 | 44.0 | 4.59e-01 | 75.3% | 100.0% |
| 3256309 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 50.0 | 4.85e-01 | 100.0% | 81.2% |
| 3178566 | 221.7.1.0 ↗ | a+b two layers › beta-Grasp › E2-binding domain of E1 › E2-binding domain of E1 | 0.61 | 52.0 | 4.61e-01 | 97.4% | 64.3% |
| 3267246 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 51.0 | 4.84e-01 | 100.0% | 78.9% |
| 3181266 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.60 | 52.0 | 4.61e-01 | 100.0% | 95.7% |
| 4054509 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.60 | 49.0 | 4.68e-01 | 100.0% | 77.8% |
| 5043146 | 3386.1.1.0 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related | 0.59 | 50.0 | 4.79e-01 | 100.0% | 95.8% |
| 3879841 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.59 | 51.0 | 4.59e-01 | 100.0% | 78.2% |
| 3994570 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.59 | 51.0 | 4.23e-01 | 100.0% | 60.7% |
| 5051138 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 49.0 | 3.90e-01 | 98.7% | 100.0% |
| 3552986 | 11.1.1.275 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL3Ra_N | 0.58 | 44.0 | 4.29e-01 | 96.1% | 75.3% |
| 3469690 | 11.2.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 | 0.58 | 46.0 | 4.06e-01 | 88.3% | 58.3% |
| 3846901 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.58 | 46.0 | 4.47e-01 | 92.2% | 100.0% |
| 3251806 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 4.77e-01 | 100.0% | 86.7% |
| 3906965 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.57 | 48.0 | 3.45e-01 | 98.7% | 35.3% |
| 3929034 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.57 | 43.0 | 3.93e-01 | 100.0% | 60.0% |
| 1838845 | 375.1.1.51 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 | 0.56 | 30.0 | 3.77e-01 | 72.7% | 95.2% |
| 3913606 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 4.42e-01 | 100.0% | 85.6% |
| 5009880 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 46.0 | 3.78e-01 | 100.0% | 60.0% |
| 3271769 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 4.26e-01 | 97.4% | 86.3% |
| 3500189 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.53 | 46.0 | 4.36e-01 | 100.0% | 83.2% |
| 3905573 | 11.1.1.135 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Tie2_1 | 0.53 | 44.0 | 4.15e-01 | 97.4% | 83.0% |
| 3881560 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.53 | 41.0 | 4.10e-01 | 97.4% | 85.0% |
| 3260841 | 11.1.3.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › DUF7743 | 0.52 | 43.0 | 4.07e-01 | 96.1% | 85.3% |
| 3263944 | 11.1.1.793 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 | 0.52 | 44.0 | 4.05e-01 | 100.0% | 81.0% |
| 3170029 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 41.0 | 3.41e-01 | 88.3% | 50.0% |
| 3913414 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 3.81e-01 | 100.0% | 64.2% |
| 3175730 | 10.32.1.244 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29989 | 0.51 | 43.0 | 3.72e-01 | 100.0% | 61.5% |
| 3923829 | 11.1.1.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M,A2M_BRD | 0.50 | 42.0 | 2.66e-01 | 100.0% | 57.7% |