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BML_coassembly_scaffold_35_prodigal-single.1__X__X__00415
Bact-VirBML_coassembly_scaffold_35_prodigal-single.1__X__X__00415
Identity
- Kingdom:
- phage
Quality
95.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-87
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.64 | 37.0 | 4.63e-01 | 80.0% | 100.0% |
| 1a5tA03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.58 | 44.0 | 3.99e-01 | 100.0% | 59.5% |
| 1v4gA01 | 6.10.140.800 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 36.0 | 3.98e-01 | 90.6% | 78.3% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 42.0 | 4.49e-01 | 90.6% | 91.8% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.55 | 40.0 | 4.44e-01 | 89.4% | 97.1% |
| 3t98B00 | 6.10.140.1350 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 40.0 | 3.99e-01 | 87.1% | 75.6% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 40.0 | 2.85e-01 | 89.4% | 27.8% |
| 6tqfA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.53 | 39.0 | 2.57e-01 | 78.8% | 93.1% |
| 7watB02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 44.0 | 3.06e-01 | 100.0% | 31.8% |
| 5b1aH00 | 1.10.10.140 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Cytochrome c oxidase, subunit VIb | 0.51 | 34.0 | 3.57e-01 | 98.8% | 74.7% |
| 3ugjA02 | 1.10.8.750 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phosphoribosylformylglycinamidine synthase, linker domain | 0.51 | 27.0 | 3.06e-01 | 97.6% | 66.1% |
| 2fzlA02 | 6.10.140.1180 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 34.0 | 3.88e-01 | 70.6% | 98.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4934657 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.72 | 45.0 | 3.57e-01 | 87.1% | 32.7% |
| 4962497 | 5073.1.3.0 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Potassium-transporting ATPase subunit KdpB transmembrane domain | 0.62 | 43.0 | 3.19e-01 | 72.9% | 48.3% |
| 3628378 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.58 | 40.0 | 3.21e-01 | 90.6% | 37.0% |
| 1208312 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.56 | 39.0 | 4.22e-01 | 70.6% | 83.3% |
| 3688231 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.56 | 48.0 | 3.86e-01 | 100.0% | 48.5% |
| 3723174 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.54 | 39.0 | 4.15e-01 | 89.4% | 85.3% |
| 4355162 | 5069.1.1.54 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrome_B, Cytochrom_B_N_2 | 0.54 | 49.0 | 3.97e-01 | 100.0% | 58.7% |
| 3530923 | 189.1.1.0 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP | 0.52 | 42.0 | 2.82e-01 | 91.8% | 59.7% |
| 5042171 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.50 | 39.0 | 3.58e-01 | 83.5% | 63.6% |