←Back to structures
BML_coassembly_scaffold_37_prodigal-single.1__X__X__00015
Bact-VirBML_coassembly_scaffold_37_prodigal-single.1__X__X__00015
Identity
- Kingdom:
- phage
Quality
79.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-73
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.76 | 49.0 | 5.22e-01 | 100.0% | 77.0% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.73 | 47.0 | 4.87e-01 | 100.0% | 71.2% |
| 2zw2A00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.70 | 52.0 | 4.96e-01 | 79.2% | 100.0% |
| 3pjyA00 | 2.60.120.1140 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 | 0.69 | 49.0 | 4.03e-01 | 75.0% | 95.3% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.69 | 46.0 | 3.91e-01 | 79.2% | 43.1% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 42.0 | 4.06e-01 | 79.2% | 57.5% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 44.0 | 4.14e-01 | 86.1% | 56.8% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 44.0 | 4.15e-01 | 90.3% | 57.5% |
| 3liuA01 | 2.60.40.3160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 49.0 | 4.20e-01 | 100.0% | 50.8% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.63 | 45.0 | 4.09e-01 | 73.6% | 70.2% |
| 7y8sB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 43.0 | 4.09e-01 | 86.1% | 60.7% |
| 1o54A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.63 | 45.0 | 4.54e-01 | 75.0% | 84.7% |
| 5bncB01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 47.0 | 3.77e-01 | 83.3% | 64.4% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 43.0 | 3.89e-01 | 81.9% | 53.1% |
| 4c47A01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.62 | 45.0 | 3.86e-01 | 79.2% | 58.2% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.62 | 45.0 | 3.84e-01 | 79.2% | 47.9% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.61 | 45.0 | 3.90e-01 | 80.6% | 56.3% |
| 3q8pB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.61 | 44.0 | 3.92e-01 | 77.8% | 63.9% |
| 6j0qA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.61 | 46.0 | 3.99e-01 | 81.9% | 53.2% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.60 | 44.0 | 3.95e-01 | 80.6% | 58.7% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 42.0 | 3.82e-01 | 75.0% | 69.5% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 44.0 | 3.34e-01 | 80.6% | 30.9% |
| 1i9gA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.60 | 42.0 | 4.46e-01 | 73.6% | 92.2% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 46.0 | 3.70e-01 | 83.3% | 67.8% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 44.0 | 3.27e-01 | 77.8% | 37.7% |
| 1rfeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 43.0 | 3.57e-01 | 79.2% | 41.2% |
| 3q39B02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.59 | 45.0 | 3.97e-01 | 81.9% | 53.6% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 40.0 | 4.17e-01 | 76.4% | 75.8% |
| 2fr5A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.59 | 43.0 | 3.50e-01 | 79.2% | 41.2% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.59 | 43.0 | 3.63e-01 | 77.8% | 78.3% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 42.0 | 4.67e-01 | 75.0% | 98.2% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 44.0 | 4.05e-01 | 84.7% | 62.5% |
| 6grsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 42.0 | 3.90e-01 | 95.8% | 60.0% |
| 1xvsA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.57 | 44.0 | 3.64e-01 | 80.6% | 47.2% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 38.0 | 3.97e-01 | 73.6% | 74.2% |
| 1yn3A00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 42.0 | 3.85e-01 | 79.2% | 88.8% |
| 3a21A03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 42.0 | 3.76e-01 | 77.8% | 78.2% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.57 | 42.0 | 3.88e-01 | 80.6% | 61.2% |
| 1et9A01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 42.0 | 3.71e-01 | 79.2% | 88.2% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 42.0 | 3.50e-01 | 86.1% | 43.0% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.57 | 43.0 | 3.50e-01 | 80.6% | 44.3% |
| 1aw7A01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 41.0 | 3.53e-01 | 79.2% | 72.4% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.56 | 42.0 | 3.21e-01 | 79.2% | 50.3% |
| 3f6zB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.56 | 38.0 | 3.73e-01 | 70.8% | 97.5% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.56 | 41.0 | 3.65e-01 | 80.6% | 52.3% |
| 2wq4A01 | 2.60.120.760 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 42.0 | 3.44e-01 | 79.2% | 72.9% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.56 | 42.0 | 3.53e-01 | 80.6% | 48.4% |
| 6ovbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 40.0 | 3.16e-01 | 76.4% | 39.0% |
| 2f1eA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.55 | 41.0 | 3.52e-01 | 79.2% | 52.6% |
| 5z6pA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.55 | 41.0 | 3.10e-01 | 79.2% | 51.1% |
| 1ji6A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 40.0 | 3.13e-01 | 77.8% | 37.0% |
| 7bysA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 40.0 | 3.43e-01 | 77.8% | 47.5% |
| 4rs5A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 40.0 | 2.91e-01 | 80.6% | 76.9% |
| 3thpA02 | 2.60.120.1520 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 40.0 | 3.22e-01 | 100.0% | 38.8% |
| 1o5uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 39.0 | 3.66e-01 | 77.8% | 65.9% |
| 2m4vA00 | 2.20.28.270 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase-binding protein A | 0.53 | 37.0 | 3.63e-01 | 79.2% | 66.3% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 42.0 | 3.78e-01 | 90.3% | 61.3% |
| 4harA00 | 3.10.50.50 | Alpha Beta › Roll › Chitinase A; domain 3 › Rubella virus capsid protein | 0.52 | 37.0 | 3.34e-01 | 73.6% | 94.9% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 39.0 | 3.56e-01 | 86.1% | 69.5% |
| 1cov100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 39.0 | 2.71e-01 | 84.7% | 64.3% |
| 5adxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 38.0 | 3.02e-01 | 83.3% | 88.3% |
| 1yudA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 36.0 | 2.84e-01 | 76.4% | 45.2% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3505268 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.79 | 72.0 | 5.79e-01 | 100.0% | 80.0% |
| 5060261 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 44.0 | 4.27e-01 | 79.2% | 55.0% |
| 3785832 | 3792.1.1.2 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd | 0.72 | 39.0 | 3.63e-01 | 77.8% | 42.2% |
| 3637393 | 3792.1.1.2 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd | 0.72 | 39.0 | 3.62e-01 | 77.8% | 42.2% |
| 4947741 | 821.1.1.17 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF27096 | 0.72 | 63.0 | 5.93e-01 | 100.0% | 81.2% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.67 | 42.0 | 4.97e-01 | 79.2% | 100.0% |
| 3526658 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.66 | 42.0 | 3.61e-01 | 79.2% | 39.2% |
| 4947808 | 304.25.1.11 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › Peptidase_M20 | 0.65 | 48.0 | 4.14e-01 | 77.8% | 100.0% |
| 3276836 | 10.4.1.25 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › PF26736 | 0.65 | 41.0 | 3.96e-01 | 77.8% | 56.0% |
| 3216210 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 43.0 | 4.86e-01 | 79.2% | 100.0% |
| 3935249 | 11.1.1.955 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_4th | 0.63 | 44.0 | 3.95e-01 | 84.7% | 52.0% |
| 3596623 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.63 | 45.0 | 4.19e-01 | 75.0% | 64.4% |
| 3904085 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 43.0 | 4.38e-01 | 79.2% | 72.9% |
| 3955717 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.63 | 47.0 | 3.93e-01 | 80.6% | 52.8% |
| 5050292 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 43.0 | 3.48e-01 | 84.7% | 38.5% |
| 3699048 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.61 | 45.0 | 3.92e-01 | 79.2% | 54.8% |
| 3231372 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.61 | 46.0 | 3.80e-01 | 80.6% | 45.4% |
| 4281749 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.61 | 45.0 | 3.88e-01 | 80.6% | 56.7% |
| 3569194 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.61 | 41.0 | 3.67e-01 | 86.1% | 47.6% |
| 4946583 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.61 | 44.0 | 3.83e-01 | 77.8% | 55.7% |
| 3224349 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.60 | 40.0 | 3.63e-01 | 76.4% | 51.6% |
| 4970084 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.60 | 42.0 | 4.02e-01 | 73.6% | 64.7% |
| 3290558 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.60 | 46.0 | 3.58e-01 | 81.9% | 60.6% |
| 4568546 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.60 | 44.0 | 3.74e-01 | 77.8% | 51.3% |
| 4648475 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.60 | 42.0 | 4.55e-01 | 75.0% | 100.0% |
| 3992154 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.60 | 42.0 | 4.48e-01 | 73.6% | 88.3% |
| 4659266 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.60 | 44.0 | 3.88e-01 | 79.2% | 60.9% |
| 3933380 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.60 | 45.0 | 3.86e-01 | 80.6% | 52.2% |
| 4333681 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.60 | 44.0 | 3.76e-01 | 79.2% | 51.7% |
| 4964887 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.60 | 43.0 | 3.69e-01 | 77.8% | 50.8% |
| 3619617 | 382.1.1.6 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR | 0.60 | 46.0 | 4.02e-01 | 95.8% | 56.2% |
| 3505201 | 1.1.3.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › UFD1_N1 | 0.59 | 43.0 | 4.73e-01 | 84.7% | 100.0% |
| 3972951 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.59 | 41.0 | 4.11e-01 | 76.4% | 69.3% |
| 4204424 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.59 | 43.0 | 3.87e-01 | 79.2% | 60.0% |
| 3573883 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.59 | 44.0 | 3.69e-01 | 80.6% | 50.4% |
| 4420915 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.59 | 44.0 | 3.80e-01 | 81.9% | 56.7% |
| 4150009 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.59 | 44.0 | 3.56e-01 | 80.6% | 43.6% |
| 3965278 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.59 | 43.0 | 3.82e-01 | 79.2% | 54.5% |
| 4450183 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.59 | 43.0 | 3.74e-01 | 79.2% | 51.3% |
| 4937342 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.58 | 43.0 | 3.73e-01 | 79.2% | 56.1% |
| 4093321 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.58 | 43.0 | 3.77e-01 | 80.6% | 58.3% |
| 4928513 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.58 | 42.0 | 3.83e-01 | 79.2% | 62.1% |
| 3961990 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.58 | 41.0 | 4.10e-01 | 79.2% | 73.3% |
| 4083103 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.58 | 43.0 | 3.68e-01 | 81.9% | 56.0% |
| 3194295 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.58 | 43.0 | 3.64e-01 | 80.6% | 49.6% |
| 4040795 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.58 | 42.0 | 3.75e-01 | 79.2% | 58.2% |
| 4976679 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.58 | 42.0 | 3.76e-01 | 80.6% | 55.5% |
| 4271892 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.57 | 42.0 | 3.61e-01 | 80.6% | 53.6% |
| 4926832 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.57 | 42.0 | 3.57e-01 | 79.2% | 49.6% |
| 3314684 | 10.10.1.5 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › DUF7755 | 0.57 | 42.0 | 3.31e-01 | 79.2% | 48.4% |
| 3273123 | 3578.1.1.0 ↗ | beta sandwiches › Third domain in metalloprotease StcE › Third domain in metalloprotease StcE › Third domain in metalloprotease StcE | 0.57 | 49.0 | 4.08e-01 | 95.8% | 62.9% |
| 4932670 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 41.0 | 3.79e-01 | 77.8% | 63.2% |
| 3621133 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 40.0 | 2.72e-01 | 76.4% | 96.6% |
| 4332271 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.56 | 42.0 | 3.54e-01 | 79.2% | 48.8% |
| 3941935 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.56 | 41.0 | 3.59e-01 | 80.6% | 50.4% |
| 3555467 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.55 | 40.0 | 3.60e-01 | 81.9% | 66.1% |
| 3680066 | 10.10.1.5 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › DUF7755 | 0.55 | 42.0 | 3.31e-01 | 83.3% | 69.0% |
| 3874464 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.54 | 47.0 | 3.06e-01 | 100.0% | 28.7% |
| 4962493 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.54 | 44.0 | 4.07e-01 | 90.3% | 95.8% |
| 3999000 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.54 | 40.0 | 3.83e-01 | 80.6% | 84.7% |
| 3216472 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.53 | 39.0 | 3.37e-01 | 80.6% | 49.6% |
| 3694098 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 39.0 | 3.32e-01 | 79.2% | 48.3% |
| 3217778 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.51 | 38.0 | 3.39e-01 | 80.6% | 58.2% |
| 3236879 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 38.0 | 2.44e-01 | 80.6% | 19.2% |
| 1124198 | 3789.1.1.1 ↗ | beta barrels › Rubella virus capsid protein C-terminal domain › Rubella virus capsid protein C-terminal domain › Rubella virus capsid protein C-terminal domain › Rubella_Capsid | 0.51 | 37.0 | 3.31e-01 | 76.4% | 95.0% |
| 3630011 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.50 | 37.0 | 2.78e-01 | 79.2% | 71.6% |
D2
medium
residues 97-126
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3puaA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.80 | 66.0 | 3.81e-01 | 100.0% | 12.2% |
| 2ckaA01 | 3.40.5.120 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.78 | 60.0 | 5.45e-01 | 100.0% | 73.5% |
| 4tpuA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.67 | 56.0 | 5.37e-01 | 100.0% | 91.9% |
| 3bxwA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.67 | 50.0 | 4.39e-01 | 96.7% | 96.4% |
| 1wjvA01 | 3.30.1490.490 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.66 | 51.0 | 4.48e-01 | 100.0% | 56.9% |
| 3hh2D03 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.61 | 44.0 | 4.33e-01 | 100.0% | 74.4% |
| 5yvxA00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.60 | 44.0 | 3.78e-01 | 93.3% | 48.3% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 48.0 | 3.77e-01 | 100.0% | 62.0% |
| 2xy1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 47.0 | 3.43e-01 | 100.0% | 51.5% |
| 3gv4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 48.0 | 3.43e-01 | 100.0% | 36.4% |
| 4ba0A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 49.0 | 4.20e-01 | 100.0% | 66.7% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.58 | 48.0 | 3.24e-01 | 100.0% | 40.2% |
| 2bayE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 43.0 | 3.74e-01 | 100.0% | 64.4% |
| 4nzjA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 41.0 | 3.21e-01 | 100.0% | 40.2% |
| 2re9A01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 38.0 | 2.67e-01 | 100.0% | 29.9% |
| 4oifA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 41.0 | 3.45e-01 | 100.0% | 46.8% |
| 5hkxA04 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 45.0 | 4.08e-01 | 100.0% | 95.5% |
| 1jceA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 34.0 | 2.48e-01 | 100.0% | 22.2% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.51 | 37.0 | 2.85e-01 | 90.0% | 71.4% |
| 2g5gX01 | 3.40.50.11550 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 41.0 | 2.60e-01 | 100.0% | 96.4% |
| 1pmtA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 33.0 | 2.69e-01 | 90.0% | 26.6% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3362593 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.78 | 61.0 | 4.24e-01 | 100.0% | 25.7% |
| 3514894 | 386.1.1.337 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › CCDC174_GRSR | 0.78 | 59.0 | 5.92e-01 | 93.3% | 90.0% |
| 3940154 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.73 | 59.0 | 3.33e-01 | 100.0% | 27.5% |
| 3445679 | 375.1.1.51 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 | 0.73 | 58.0 | 5.18e-01 | 100.0% | 77.1% |
| 3587273 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 57.0 | 4.67e-01 | 96.7% | 80.0% |
| 3689856 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 55.0 | 4.55e-01 | 96.7% | 91.7% |
| 3823407 | 386.1.1.14 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-LYAR | 0.68 | 52.0 | 4.36e-01 | 100.0% | 46.7% |
| 4961283 | 101.1.2.935 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_B0008_C | 0.68 | 52.0 | 3.74e-01 | 96.7% | 33.9% |
| 3929103 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.67 | 53.0 | 4.48e-01 | 100.0% | 85.0% |
| 3446806 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.66 | 47.0 | 3.74e-01 | 96.7% | 98.8% |
| 4011311 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 46.0 | 4.63e-01 | 100.0% | 93.3% |
| 4885815 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.62 | 45.0 | 4.04e-01 | 96.7% | 100.0% |
| 5055462 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 49.0 | 4.61e-01 | 96.7% | 92.5% |
| 4470809 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 47.0 | 4.01e-01 | 100.0% | 98.3% |
| 3624908 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.61 | 49.0 | 3.64e-01 | 100.0% | 36.7% |
| 3562042 | 145.1.1.64 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › PF27582 | 0.60 | 49.0 | 4.56e-01 | 96.7% | 100.0% |
| 3431728 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 50.0 | 4.22e-01 | 100.0% | 54.5% |
| 4587586 | 10.12.1.15 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ARD | 0.59 | 45.0 | 2.91e-01 | 100.0% | 71.7% |
| 3245932 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 41.0 | 3.93e-01 | 100.0% | 86.7% |
| 3708288 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 39.0 | 3.88e-01 | 100.0% | 71.4% |
| 3573611 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 42.0 | 4.26e-01 | 96.7% | 93.3% |
| 4838146 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 42.0 | 3.78e-01 | 100.0% | 81.5% |
| 4945555 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 35.0 | 3.56e-01 | 93.3% | 85.7% |
D3
medium
residues 170-238
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cw8A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.55 | 41.0 | 3.19e-01 | 84.1% | 78.7% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.53 | 41.0 | 3.17e-01 | 85.5% | 79.9% |
| 1dq3A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.51 | 38.0 | 2.99e-01 | 85.5% | 80.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977549 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.61 | 41.0 | 4.15e-01 | 92.8% | 70.0% |
| 3304083 | 80.1.1.0 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain | 0.57 | 37.0 | 3.61e-01 | 78.3% | 58.7% |
| 3959734 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 47.0 | 4.28e-01 | 95.7% | 85.3% |
| 3289362 | 101.1.2.610 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH2_Lhr | 0.56 | 47.0 | 4.15e-01 | 95.7% | 73.3% |
| 4039971 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.54 | 42.0 | 3.23e-01 | 88.4% | 81.7% |
| 3985690 | 109.3.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_5 | 0.50 | 40.0 | 2.89e-01 | 91.3% | 49.1% |
D4
medium
residues 249-283
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bxwA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.65 | 48.0 | 4.32e-01 | 88.6% | 100.0% |
| 2jz6A01 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.61 | 44.0 | 4.14e-01 | 88.6% | 68.0% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.60 | 45.0 | 4.30e-01 | 91.4% | 97.9% |
| 2ff4A03 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.60 | 47.0 | 3.63e-01 | 100.0% | 98.0% |
| 1jovA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 42.0 | 2.59e-01 | 88.6% | 11.2% |
| 1wzlA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 45.0 | 3.54e-01 | 88.6% | 45.8% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.58 | 44.0 | 3.94e-01 | 100.0% | 67.2% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 46.0 | 3.83e-01 | 100.0% | 70.4% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.56 | 44.0 | 3.08e-01 | 91.4% | 41.8% |
| 4nzjA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 44.0 | 3.49e-01 | 100.0% | 44.8% |
| 5yvxA00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.54 | 43.0 | 3.80e-01 | 100.0% | 85.0% |
| 4oifA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 39.0 | 3.37e-01 | 88.6% | 48.4% |
| 1g5gA03 | 2.60.40.1690 | Mainly Beta › Sandwich › Immunoglobulin-like › Head and neck region of the ectodomain of NDV fusion glycoprotein | 0.52 | 36.0 | 3.33e-01 | 88.6% | 60.0% |
| 4chkB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 39.0 | 3.08e-01 | 97.1% | 49.5% |
| 4gipD03 | 2.60.40.1690 | Mainly Beta › Sandwich › Immunoglobulin-like › Head and neck region of the ectodomain of NDV fusion glycoprotein | 0.51 | 38.0 | 3.43e-01 | 91.4% | 63.2% |
| 2q07A02 | 3.10.450.90 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain | 0.51 | 36.0 | 3.14e-01 | 74.3% | 72.3% |
| 2bc0A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 34.0 | 2.24e-01 | 77.1% | 46.1% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3572307 | 4.1.1.405 ↗ | beta barrels › SH3 › SH3 › SH3 › CCDC174_GRSR | 0.73 | 52.0 | 5.39e-01 | 80.0% | 90.0% |
| 3362593 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.73 | 57.0 | 4.09e-01 | 100.0% | 28.3% |
| 3514894 | 386.1.1.337 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › CCDC174_GRSR | 0.72 | 50.0 | 5.20e-01 | 77.1% | 90.0% |
| 3243669 | 4076.2.1.0 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like | 0.71 | 58.0 | 5.04e-01 | 100.0% | 98.3% |
| 4932421 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 54.0 | 4.99e-01 | 91.4% | 78.0% |
| 3574854 | 375.1.1.267 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Mcm10, zf-CCCH_Mcm10 | 0.69 | 57.0 | 4.38e-01 | 97.1% | 44.7% |
| 3521800 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.69 | 50.0 | 5.01e-01 | 80.0% | 85.7% |
| 3445679 | 375.1.1.51 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 | 0.69 | 56.0 | 5.24e-01 | 100.0% | 85.4% |
| 3388125 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 52.0 | 4.88e-01 | 91.4% | 95.6% |
| 3401929 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 51.0 | 4.93e-01 | 88.6% | 100.0% |
| 4291660 | 4076.3.1.7 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › DUF2635 | 0.65 | 49.0 | 4.58e-01 | 91.4% | 95.9% |
| 4946461 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.65 | 50.0 | 3.18e-01 | 100.0% | 67.3% |
| 3622513 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.64 | 50.0 | 4.33e-01 | 91.4% | 93.3% |
| 3245312 | 375.1.1.51 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 | 0.64 | 48.0 | 4.89e-01 | 91.4% | 100.0% |
| 3491054 | 7590.1.1.7 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › MID_MedPIWI | 0.64 | 47.0 | 3.11e-01 | 88.6% | 18.2% |
| 4995670 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 50.0 | 4.86e-01 | 91.4% | 80.0% |
| 4046934 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.64 | 47.0 | 4.39e-01 | 82.9% | 68.9% |
| 4927454 | 386.1.1.418 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-FPG_IleRS | 0.63 | 50.0 | 4.69e-01 | 91.4% | 100.0% |
| 3596753 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 53.0 | 4.80e-01 | 100.0% | 100.0% |
| 3929103 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.63 | 47.0 | 4.17e-01 | 88.6% | 85.0% |
| 4470809 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 46.0 | 4.05e-01 | 88.6% | 100.0% |
| 3431728 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 47.0 | 4.12e-01 | 91.4% | 58.2% |
| 3708288 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 39.0 | 3.91e-01 | 91.4% | 77.1% |
| 4566976 | 375.14.2.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS2) | 0.56 | 42.0 | 4.13e-01 | 94.3% | 97.5% |
| 1412427 | 3784.1.1.1 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › DUF4883 | 0.56 | 44.0 | 3.08e-01 | 91.4% | 42.1% |
| 4945555 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 40.0 | 4.03e-01 | 94.3% | 94.3% |
| 3596630 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 36.0 | 3.64e-01 | 97.1% | 85.7% |
| 3829581 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.51 | 35.0 | 3.21e-01 | 91.4% | 81.5% |