←Back to structures
BML_coassembly_scaffold_37_prodigal-single.1__X__X__00056
Bact-VirBML_coassembly_scaffold_37_prodigal-single.1__X__X__00056
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-79
Domain cluster:
rep: IMGVR_UViG_3300018080_003942-3300018080-Ga0180433_1000026956__D1-66
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3afgA03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 36.0 | 3.31e-01 | 84.6% | 43.1% |
| 1zbuB01 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.53 | 42.0 | 4.28e-01 | 85.9% | 98.6% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.53 | 47.0 | 4.49e-01 | 100.0% | 90.2% |
| 1skoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.52 | 35.0 | 3.10e-01 | 70.5% | 81.9% |
| 4bs9A01 | 3.90.930.60 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.51 | 43.0 | 4.12e-01 | 97.4% | 94.7% |
| 4lvnP00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 38.0 | 3.84e-01 | 80.8% | 92.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3510118 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.59 | 39.0 | 4.46e-01 | 98.7% | 96.4% |
| 3395675 | 223.2.1.20 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 | 0.51 | 35.0 | 2.93e-01 | 71.8% | 95.5% |
| 1291966 | 304.7.1.5 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › SUB1_ProdP9 | 0.50 | 38.0 | 3.84e-01 | 80.8% | 92.6% |
| 3964245 | 3438.1.1.2 ↗ | alpha arrays › Unknown function protein VPA0580 › Unknown function protein VPA0580 › Unknown function protein VPA0580 › DUF2322 | 0.50 | 38.0 | 3.53e-01 | 83.3% | 85.7% |