Back to structures

BML_coassembly_scaffold_37_prodigal-single.1__X__X__00210

Bact-Vir

BML_coassembly_scaffold_37_prodigal-single.1__X__X__00210

Identity

Kingdom:
phage

Quality

73.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-69
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.74 64.0 5.01e-01 100.0% 77.6%
4k17B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 60.0 5.16e-01 98.5% 80.2%
1v5mA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 60.0 4.82e-01 100.0% 83.1%
2kcjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 57.0 4.93e-01 93.9% 85.2%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 58.0 5.27e-01 100.0% 97.9%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 58.0 5.32e-01 100.0% 95.7%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 59.0 5.05e-01 100.0% 91.8%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 59.0 4.78e-01 98.5% 76.6%
4wsfA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 56.0 4.76e-01 95.5% 83.8%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 58.0 4.95e-01 100.0% 84.4%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 56.0 4.81e-01 98.5% 87.3%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 56.0 5.16e-01 97.0% 98.9%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.66 57.0 4.56e-01 100.0% 78.7%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 56.0 4.78e-01 100.0% 80.7%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.65 56.0 4.88e-01 98.5% 99.0%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 56.0 5.12e-01 98.5% 98.9%
1wguA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 56.0 4.76e-01 100.0% 100.0%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 55.0 5.11e-01 100.0% 97.7%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 56.0 4.88e-01 100.0% 99.0%
1kz7C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 55.0 4.43e-01 100.0% 80.3%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 54.0 4.55e-01 100.0% 91.8%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 54.0 4.26e-01 95.5% 87.1%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 54.0 4.39e-01 100.0% 64.2%
4gouA02 2.30.29.200 Mainly Beta › Roll › PH-domain like › 0.63 55.0 4.21e-01 98.5% 72.8%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 53.0 4.31e-01 97.0% 72.4%
1plsA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 54.0 4.59e-01 100.0% 86.7%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 53.0 4.89e-01 100.0% 96.7%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.61 47.0 3.94e-01 100.0% 47.5%
3f5rA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 50.0 4.38e-01 100.0% 85.8%
4zgfA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.59 42.0 3.33e-01 75.8% 89.4%
1mkeA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 49.0 3.97e-01 100.0% 69.4%
2elbA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 4.30e-01 98.5% 83.3%
2nysA00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.57 46.0 3.87e-01 90.9% 59.0%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 44.0 4.46e-01 93.9% 89.6%
4csqA00 2.30.29.190 Mainly Beta › Roll › PH-domain like › 0.55 41.0 3.46e-01 80.3% 82.3%
3i3lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 47.0 2.86e-01 97.0% 68.9%
3o4fC01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.54 37.0 4.03e-01 77.3% 92.2%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.53 41.0 3.65e-01 84.8% 64.9%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.52 39.0 3.58e-01 86.4% 59.6%
5wfiA01 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.59e-01 93.9% 100.0%
4qflA02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.52 46.0 3.39e-01 98.5% 81.3%
2wesA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 43.0 2.63e-01 97.0% 65.1%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.51 36.0 3.54e-01 72.7% 88.7%
2gfuA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 38.0 3.08e-01 80.3% 62.7%
4m0wA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.40e-01 93.9% 90.5%
4jxkA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.51 41.0 3.12e-01 89.4% 64.2%
4gp3A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 38.0 3.21e-01 84.8% 94.3%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4056117 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.77 60.0 6.04e-01 93.9% 84.6%
4948490 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 58.0 5.56e-01 100.0% 77.3%
3890922 220.1.1.132 beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.71 60.0 5.28e-01 100.0% 87.6%
3926363 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 61.0 5.16e-01 100.0% 85.2%
3217951 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 62.0 4.79e-01 100.0% 62.0%
5023580 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 54.0 5.52e-01 98.5% 86.2%
3834491 220.1.1.163 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7046 0.70 61.0 5.36e-01 100.0% 93.0%
4973804 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 59.0 5.73e-01 100.0% 84.0%
3987903 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.70 51.0 5.18e-01 98.5% 80.0%
328471 220.1.1.63 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NF1 0.69 60.0 5.03e-01 100.0% 87.2%
3272546 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.69 60.0 4.93e-01 100.0% 86.4%
3699577 220.1.1.236 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_27 0.69 60.0 5.09e-01 98.5% 86.4%
3706884 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 59.0 5.05e-01 100.0% 89.1%
3925891 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 59.0 5.39e-01 100.0% 97.8%
3995153 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 59.0 5.13e-01 100.0% 87.6%
3891023 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 59.0 4.39e-01 100.0% 52.8%
4024573 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 57.0 5.02e-01 100.0% 86.7%
4926892 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.68 60.0 5.01e-01 100.0% 63.5%
3900190 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 58.0 4.72e-01 100.0% 76.1%
3704939 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 60.0 5.41e-01 100.0% 81.1%
3260374 220.1.1.43 beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH 0.68 54.0 4.90e-01 90.9% 91.4%
3743404 220.1.1.256 beta barrels › PH domain-like › PH domain-like › PH domain-like › Red1 0.67 58.0 3.72e-01 100.0% 27.4%
5061515 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 56.0 4.86e-01 93.9% 98.1%
3742641 220.1.1.58 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.67 59.0 5.02e-01 100.0% 82.7%
3935406 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 59.0 5.25e-01 100.0% 95.8%
3263018 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 58.0 5.14e-01 100.0% 95.0%
3274553 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 58.0 5.04e-01 100.0% 94.3%
3204773 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 57.0 4.78e-01 98.5% 78.3%
3864477 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 57.0 4.38e-01 100.0% 63.6%
3775836 220.1.1.56 beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH 0.67 56.0 4.90e-01 100.0% 90.0%
3737804 220.1.1.121 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 0.67 57.0 4.98e-01 100.0% 90.5%
4543309 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 57.0 4.83e-01 100.0% 82.6%
3750640 220.1.1.38 beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.67 57.0 4.84e-01 97.0% 93.6%
3354048 220.1.1.163 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7046 0.66 57.0 5.04e-01 100.0% 93.0%
4937908 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.66 56.0 4.40e-01 100.0% 61.4%
3514750 220.1.1.52 beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C 0.66 57.0 4.88e-01 100.0% 86.4%
5075225 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 58.0 4.83e-01 100.0% 62.1%
3406898 220.1.1.125 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PLEKHM2 0.66 56.0 4.48e-01 100.0% 66.7%
3495619 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.65 57.0 4.86e-01 100.0% 85.5%
3993001 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 57.0 4.39e-01 100.0% 74.8%
3233686 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.65 56.0 4.39e-01 97.0% 66.9%
3258360 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 55.0 4.85e-01 100.0% 81.9%
3259128 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.65 57.0 4.68e-01 100.0% 74.4%
3509508 220.1.1.44 beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.65 56.0 5.06e-01 100.0% 91.6%
4962251 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.65 56.0 4.50e-01 98.5% 88.1%
4962224 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.65 56.0 4.20e-01 98.5% 57.6%
3614421 220.1.1.236 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_27 0.65 56.0 4.90e-01 98.5% 91.0%
3939412 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 55.0 4.98e-01 100.0% 97.9%
3584295 220.1.1.118 beta barrels › PH domain-like › PH domain-like › PH domain-like › RHG20_PH 0.64 55.0 4.57e-01 100.0% 74.4%
3273591 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 55.0 4.48e-01 98.5% 65.4%
3782222 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 54.0 4.27e-01 100.0% 66.5%
3219484 220.1.1.44 beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.64 54.0 4.85e-01 100.0% 91.0%
3684918 6043.1.1.0 a+b two layers › yfeY-like › yfeY-like › yfeY-like 0.64 47.0 4.80e-01 78.8% 86.2%
3924833 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 55.0 4.62e-01 100.0% 78.3%
3906596 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 56.0 4.19e-01 100.0% 75.3%
3490317 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 55.0 4.26e-01 100.0% 86.3%
3906078 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 54.0 4.78e-01 98.5% 94.0%
3176830 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 54.0 4.68e-01 100.0% 87.3%
4996362 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.64 56.0 4.78e-01 100.0% 63.0%
3911252 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 55.0 4.92e-01 100.0% 95.8%
3992398 220.1.1.44 beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.63 54.0 4.61e-01 100.0% 94.8%
3995389 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.63 55.0 4.34e-01 100.0% 74.5%
3937216 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.63 55.0 4.45e-01 100.0% 78.5%
3887129 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 54.0 4.95e-01 100.0% 95.6%
3470252 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.63 54.0 4.65e-01 100.0% 98.2%
3511590 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 54.0 4.73e-01 100.0% 88.6%
3931122 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 55.0 4.93e-01 100.0% 96.8%
3390648 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 54.0 4.53e-01 100.0% 80.8%
3487713 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 52.0 3.83e-01 92.4% 79.4%
3777215 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 52.0 4.66e-01 100.0% 93.0%
4980465 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 52.0 4.80e-01 100.0% 71.1%
3266831 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 52.0 4.72e-01 98.5% 92.6%
3882657 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 52.0 4.57e-01 100.0% 91.4%
5059922 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 4.68e-01 100.0% 94.7%
3876027 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.61 51.0 4.04e-01 98.5% 71.3%
5007103 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 51.0 4.85e-01 98.5% 97.5%
3957533 220.1.1.82 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.59 51.0 4.85e-01 100.0% 83.7%
5021724 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 48.0 4.65e-01 98.5% 98.8%
5049640 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 49.0 4.66e-01 98.5% 81.0%
5032759 9.23.1.0 beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 0.57 42.0 3.89e-01 78.8% 88.1%
3839271 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.54 39.0 3.13e-01 80.3% 90.3%
3629700 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.54 37.0 2.37e-01 71.2% 23.3%
3471648 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 45.0 2.74e-01 95.5% 89.5%
5037689 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 41.0 3.66e-01 97.0% 94.3%
5073130 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 40.0 3.46e-01 92.4% 81.6%