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BML_coassembly_scaffold_37_prodigal-single.1__X__X__00256
Bact-VirBML_coassembly_scaffold_37_prodigal-single.1__X__X__00256
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-138_351-378
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17767.8 best | NAPRTase_N | 69.1 | 6.70e-19 | 75.6% | 96.0% |
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ybeB01 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.96 | 93.0 | 6.54e-01 | 99.4% | 94.2% |
| 1vlpA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.91 | 88.0 | 6.19e-01 | 100.0% | 92.8% |
| 2im5A00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.89 | 86.0 | 6.17e-01 | 100.0% | 94.1% |
| 1yirA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.89 | 86.0 | 6.10e-01 | 99.4% | 93.1% |
| 4mzyA01 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.84 | 80.0 | 6.12e-01 | 100.0% | 55.3% |
| 4yubB01 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.78 | 74.0 | 5.91e-01 | 100.0% | 57.4% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.75 | 37.0 | 5.32e-01 | 90.4% | 100.0% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.71 | 46.0 | 5.34e-01 | 81.4% | 90.2% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 32.0 | 4.74e-01 | 76.3% | 100.0% |
| 2pd1A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 42.0 | 5.19e-01 | 80.8% | 97.9% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 34.0 | 4.55e-01 | 80.1% | 97.3% |
| 1xmbA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 42.0 | 5.14e-01 | 78.8% | 100.0% |
| 6lxgA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 32.0 | 4.54e-01 | 73.1% | 100.0% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 40.0 | 4.87e-01 | 81.4% | 95.0% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 40.0 | 4.86e-01 | 82.1% | 96.9% |
| 2fb0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 40.0 | 4.91e-01 | 81.4% | 100.0% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 40.0 | 4.93e-01 | 79.5% | 100.0% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.65 | 48.0 | 5.37e-01 | 82.1% | 100.0% |
| 2jbmD01 | 3.90.1170.20 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain | 0.65 | 47.0 | 4.93e-01 | 87.8% | 82.7% |
| 2jvrA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 35.0 | 4.53e-01 | 82.7% | 98.8% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 39.0 | 4.78e-01 | 80.8% | 96.9% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 40.0 | 4.91e-01 | 81.4% | 100.0% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 40.0 | 4.86e-01 | 80.1% | 97.1% |
| 1x7vA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 40.0 | 4.86e-01 | 85.3% | 100.0% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 35.0 | 4.42e-01 | 81.4% | 92.3% |
| 5k9fA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 38.0 | 4.53e-01 | 79.5% | 95.1% |
| 3bb5A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 39.0 | 4.70e-01 | 79.5% | 100.0% |
| 3ramA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 44.0 | 4.99e-01 | 80.1% | 100.0% |
| 1r89A03 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.60 | 39.0 | 4.21e-01 | 83.3% | 76.9% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 37.0 | 4.50e-01 | 79.5% | 100.0% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 33.0 | 3.85e-01 | 92.3% | 75.7% |
| 3io1A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 42.0 | 4.74e-01 | 80.8% | 98.3% |
| 2a2cA02 | 3.30.70.3170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 31.0 | 4.06e-01 | 78.2% | 96.4% |
| 3oh8A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 40.0 | 4.25e-01 | 71.2% | 99.3% |
| 5wm1A02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.57 | 38.0 | 4.44e-01 | 89.7% | 96.3% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.57 | 36.0 | 3.98e-01 | 76.3% | 78.6% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 31.0 | 3.88e-01 | 89.1% | 90.0% |
| 1dj0A01 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.56 | 43.0 | 4.60e-01 | 80.8% | 100.0% |
| 1x9mA03 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 44.0 | 4.20e-01 | 91.0% | 71.3% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 29.0 | 3.12e-01 | 70.5% | 56.6% |
| 4jvyB00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.55 | 40.0 | 3.78e-01 | 80.8% | 62.1% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.55 | 38.0 | 3.91e-01 | 89.7% | 73.0% |
| 2lfvA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.55 | 29.0 | 3.45e-01 | 81.4% | 73.6% |
| 4dmzA02 | 3.30.70.2880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 37.0 | 3.94e-01 | 91.7% | 79.6% |
| 4zmuA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 42.0 | 4.31e-01 | 90.4% | 83.9% |
| 6zxbA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 41.0 | 4.31e-01 | 89.1% | 86.8% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 34.0 | 4.16e-01 | 71.2% | 100.0% |
| 7r9xA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.53 | 39.0 | 3.39e-01 | 75.6% | 85.9% |
| 7e6gA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.53 | 41.0 | 4.18e-01 | 91.0% | 85.2% |
| 3tvkA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.52 | 43.0 | 4.24e-01 | 91.0% | 80.8% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 24.0 | 3.22e-01 | 82.1% | 80.5% |
| 3go9A01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 42.0 | 3.63e-01 | 85.3% | 75.1% |
| 3hvwA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.50 | 42.0 | 4.26e-01 | 89.1% | 90.6% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7549 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.95 | 76.0 | 7.69e-01 | 82.1% | 84.5% |
| 3966747 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.92 | 71.0 | 7.42e-01 | 82.1% | 85.5% |
| 4277750 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.90 | 72.0 | 7.61e-01 | 81.4% | 90.7% |
| 5018045 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.89 | 71.0 | 7.22e-01 | 82.1% | 85.2% |
| 3963556 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.89 | 71.0 | 7.57e-01 | 82.1% | 91.4% |
| 4046577 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.89 | 71.0 | 7.30e-01 | 82.1% | 86.7% |
| 3408529 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.83 | 80.0 | 7.66e-01 | 100.0% | 89.7% |
| None | — | 0.83 | 80.0 | 7.72e-01 | 100.0% | 92.4% | |
| 3643452 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.83 | 79.0 | 7.53e-01 | 100.0% | 88.0% |
| 3962332 | 325.1.4.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like | 0.83 | 73.0 | 7.50e-01 | 94.2% | 95.3% |
| 4979158 | 325.1.4.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N | 0.82 | 64.0 | 6.91e-01 | 80.1% | 93.3% |
| 5076573 | 304.43.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 | 0.76 | 39.0 | 5.48e-01 | 75.0% | 100.0% |
| 4165624 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.71 | 38.0 | 5.07e-01 | 90.4% | 96.5% |
| 5177 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.69 | 42.0 | 5.14e-01 | 81.4% | 95.0% |
| 3496338 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.68 | 45.0 | 5.35e-01 | 85.3% | 99.0% |
| 4984314 | 304.43.1.6 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 › FLAD1_M | 0.68 | 39.0 | 5.04e-01 | 76.3% | 98.9% |
| 4616494 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.67 | 36.0 | 4.81e-01 | 89.7% | 100.0% |
| 3641835 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.66 | 38.0 | 4.67e-01 | 80.1% | 88.0% |
| 4505732 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.66 | 38.0 | 4.77e-01 | 78.8% | 93.7% |
| 5040671 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.66 | 37.0 | 4.80e-01 | 78.8% | 96.7% |
| 4955972 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.65 | 38.0 | 4.65e-01 | 82.7% | 94.6% |
| 3607364 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.65 | 37.0 | 4.17e-01 | 88.5% | 73.9% |
| 1146572 | 304.152.1.1 ↗ | a+b two layers › Alpha-beta plaits › E4-ORF3 › E4-ORF3 › Adeno_E4_ORF3 | 0.64 | 46.0 | 5.29e-01 | 80.8% | 100.0% |
| 3357573 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 38.0 | 4.40e-01 | 82.1% | 82.7% |
| 4371656 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.63 | 34.0 | 4.16e-01 | 82.1% | 83.2% |
| 3950125 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.63 | 36.0 | 4.48e-01 | 79.5% | 94.4% |
| 3464795 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.63 | 38.0 | 4.29e-01 | 82.7% | 77.5% |
| 5040672 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.63 | 37.0 | 4.67e-01 | 82.7% | 100.0% |
| 5077368 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.63 | 49.0 | 5.38e-01 | 89.1% | 100.0% |
| 4978093 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 46.0 | 5.00e-01 | 87.8% | 90.8% |
| 3710689 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.62 | 39.0 | 4.83e-01 | 71.2% | 100.0% |
| 3626328 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.60 | 32.0 | 4.15e-01 | 80.1% | 96.2% |
| 5009620 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.60 | 45.0 | 5.06e-01 | 80.8% | 99.2% |
| 4627102 | 304.33.1.1 ↗ | a+b two layers › Alpha-beta plaits › CheY-binding domain of CheA › CheY-binding domain of CheA › P2 | 0.60 | 36.0 | 4.25e-01 | 82.7% | 86.7% |
| 3596674 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.59 | 49.0 | 3.96e-01 | 86.5% | 80.0% |
| 4947808 | 304.25.1.11 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › Peptidase_M20 | 0.59 | 41.0 | 4.77e-01 | 78.2% | 100.0% |
| 4304256 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 48.0 | 4.10e-01 | 85.3% | 80.3% |
| 3515820 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 36.0 | 4.14e-01 | 78.8% | 84.5% |
| 3280164 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.59 | 42.0 | 4.86e-01 | 78.8% | 100.0% |
| 4475204 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 47.0 | 4.01e-01 | 85.3% | 79.2% |
| 5019384 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.59 | 33.0 | 4.09e-01 | 73.7% | 89.5% |
| 4996724 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.59 | 36.0 | 4.38e-01 | 76.9% | 98.9% |
| 3350908 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.58 | 47.0 | 3.95e-01 | 85.3% | 74.8% |
| 4449545 | 304.48.1.39 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › MatK_N | 0.58 | 45.0 | 3.46e-01 | 81.4% | 52.1% |
| 5054179 | 304.42.1.1 ↗ | a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC › MoaC | 0.58 | 47.0 | 4.91e-01 | 87.2% | 95.9% |
| 4672169 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.57 | 46.0 | 3.95e-01 | 84.6% | 78.4% |
| 5072924 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.56 | 43.0 | 4.60e-01 | 78.8% | 100.0% |
| 3597807 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.56 | 38.0 | 4.14e-01 | 73.1% | 82.3% |
| 4409787 | 327.19.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C | 0.56 | 27.0 | 3.50e-01 | 70.5% | 83.7% |
| 5058271 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.56 | 33.0 | 3.95e-01 | 75.6% | 89.0% |
| 3863915 | 304.28.1.28 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › JAG1 | 0.56 | 38.0 | 3.76e-01 | 78.2% | 64.8% |
| 4877694 | 304.51.1.3 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_assoc | 0.55 | 39.0 | 4.46e-01 | 80.1% | 97.4% |
| 3980590 | 304.13.1.1 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB | 0.55 | 36.0 | 4.28e-01 | 88.5% | 98.1% |
| 4643984 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.55 | 44.0 | 4.03e-01 | 85.3% | 88.5% |
| 4997642 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.54 | 46.0 | 3.85e-01 | 91.7% | 74.1% |
| 4246888 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.54 | 48.0 | 4.11e-01 | 97.4% | 88.4% |
| 4943451 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.53 | 46.0 | 3.86e-01 | 94.9% | 77.4% |
| 5027110 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.53 | 47.0 | 3.92e-01 | 94.9% | 77.4% |
| 3715301 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.53 | 44.0 | 4.61e-01 | 89.1% | 97.9% |
| 5073903 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.53 | 39.0 | 4.06e-01 | 75.6% | 100.0% |
| 3284240 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.53 | 41.0 | 3.50e-01 | 80.8% | 86.0% |
| 3744247 | 101.1.11.112 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › SGT1 | 0.53 | 44.0 | 4.12e-01 | 89.7% | 78.5% |
| 4102600 | 304.4.1.8 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › rhaM | 0.52 | 37.0 | 4.18e-01 | 81.4% | 98.3% |
| 3254376 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.52 | 22.0 | 3.14e-01 | 76.3% | 89.1% |
| 4170997 | 304.48.1.39 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › MatK_N | 0.51 | 39.0 | 3.59e-01 | 80.8% | 75.1% |
| 3945338 | 865.1.1.1 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 | 0.51 | 40.0 | 3.53e-01 | 82.7% | 93.5% |
| 3633031 | 304.8.1.73 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › V-ATPase_C | 0.51 | 37.0 | 4.19e-01 | 82.7% | 100.0% |
| 5082266 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 45.0 | 3.89e-01 | 96.8% | 80.0% |
| 5020091 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.50 | 44.0 | 3.04e-01 | 94.9% | 68.0% |
D2
medium
residues 214-314
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ybeB01 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.86 | 78.0 | 5.05e-01 | 100.0% | 24.3% |
| 2im5A00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.84 | 74.0 | 4.80e-01 | 100.0% | 24.2% |
| 1yirA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.83 | 74.0 | 4.83e-01 | 100.0% | 24.4% |
| 1vlpA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.80 | 72.0 | 4.65e-01 | 100.0% | 23.2% |
| 4mzyA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.76 | 63.0 | 5.27e-01 | 100.0% | 53.6% |
| 3oyzA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.63 | 57.0 | 4.18e-01 | 100.0% | 67.5% |
| 2xtkA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 53.0 | 3.82e-01 | 100.0% | 47.7% |
| 2wm1A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 52.0 | 3.70e-01 | 100.0% | 45.2% |
| 2oqhA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.59 | 51.0 | 3.97e-01 | 100.0% | 46.7% |
| 3do6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 52.0 | 3.73e-01 | 100.0% | 61.0% |
| 1ekeA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 42.0 | 3.54e-01 | 74.3% | 81.9% |
| 2w91A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 50.0 | 3.55e-01 | 100.0% | 43.7% |
| 1e40A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 48.0 | 3.31e-01 | 100.0% | 71.2% |
| 3qtgA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.56 | 49.0 | 3.77e-01 | 100.0% | 47.5% |
| 7qaqA01 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.55 | 41.0 | 3.25e-01 | 78.2% | 45.1% |
| 3ugsB00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.51 | 45.0 | 3.62e-01 | 100.0% | 52.9% |
| 4n82B00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.51 | 45.0 | 3.95e-01 | 100.0% | 76.5% |
| 1bxgA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.50 | 41.0 | 3.74e-01 | 89.1% | 90.4% |
| 1hjrA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 37.0 | 3.24e-01 | 78.2% | 57.6% |
| 2jfzA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 43.0 | 4.16e-01 | 100.0% | 82.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3607094 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.84 | 75.0 | 5.36e-01 | 100.0% | 36.5% |
| 3593338 | 2002.4.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like | 0.84 | 75.0 | 5.36e-01 | 100.0% | 36.7% |
| 4004363 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.84 | 74.0 | 5.38e-01 | 100.0% | 37.3% |
| 3179073 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.82 | 76.0 | 5.30e-01 | 100.0% | 34.5% |
| 3470564 | 2002.1.1.128 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAPRTase | 0.75 | 69.0 | 4.94e-01 | 100.0% | 59.6% |
| 3408547 | 2002.1.1.128 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAPRTase | 0.73 | 68.0 | 5.04e-01 | 100.0% | 59.6% |
| 3395661 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.60 | 54.0 | 3.99e-01 | 100.0% | 42.3% |
| 3297633 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.59 | 52.0 | 4.25e-01 | 100.0% | 61.1% |
| 4990032 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.58 | 52.0 | 4.05e-01 | 100.0% | 89.5% |
| 3952262 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.57 | 40.0 | 4.29e-01 | 93.1% | 87.1% |
| 4018423 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 44.0 | 4.01e-01 | 86.1% | 63.0% |
| 3702837 | 2004.1.1.292 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AFG1_ATPase | 0.55 | 47.0 | 4.08e-01 | 96.0% | 66.9% |
| 3384000 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.54 | 48.0 | 3.67e-01 | 100.0% | 58.4% |
| 3465342 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.54 | 47.0 | 3.44e-01 | 100.0% | 40.7% |
| 4132371 | 2003.1.5.152 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CMAS, Methyltransf_25 | 0.53 | 47.0 | 3.78e-01 | 100.0% | 80.0% |
| 3165468 | 2003.1.1.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N | 0.53 | 46.0 | 3.79e-01 | 100.0% | 87.2% |
| 3355334 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.52 | 46.0 | 3.43e-01 | 100.0% | 40.7% |
| 4246555 | 2004.1.1.138 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta | 0.52 | 40.0 | 3.72e-01 | 100.0% | 62.9% |
| 3770797 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.52 | 44.0 | 3.47e-01 | 97.0% | 70.0% |
| 3623798 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.52 | 45.0 | 3.55e-01 | 100.0% | 93.5% |
| 3797400 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.52 | 45.0 | 3.56e-01 | 100.0% | 93.3% |