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BML_coassembly_scaffold_37_prodigal-single.1__X__X__00305
Bact-VirBML_coassembly_scaffold_37_prodigal-single.1__X__X__00305
Identity
- Kingdom:
- phage
Quality
44.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 527-659
Domain cluster:
rep: MK804891.1__QDB73903.1__2D05_072__00072__D11-147
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wvuB02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.61 | 44.0 | 3.88e-01 | 75.2% | 67.3% |
| 1oohA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.55 | 41.0 | 4.25e-01 | 78.9% | 85.7% |
| 4finB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 47.0 | 3.72e-01 | 93.2% | 66.2% |
| 2g5gX02 | 1.10.8.760 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Haem-binding uptake, Tiki superfamily, ChaN, domain 2 | 0.54 | 26.0 | 3.68e-01 | 86.5% | 100.0% |
| 7tvyA01 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.54 | 39.0 | 4.17e-01 | 75.9% | 87.9% |
| 7k2tA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 48.0 | 3.95e-01 | 97.0% | 72.2% |
| 5ayvA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.52 | 31.0 | 3.18e-01 | 100.0% | 59.2% |
| 1e29A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.51 | 34.0 | 3.42e-01 | 99.2% | 65.9% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.51 | 25.0 | 3.10e-01 | 94.0% | 72.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3947964 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.93 | 90.0 | 8.74e-01 | 100.0% | 97.9% |
| 5072380 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.75 | 41.0 | 4.62e-01 | 79.7% | 70.0% |
| 3699807 | 108.1.1.27 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 | 0.59 | 43.0 | 4.72e-01 | 75.9% | 100.0% |
| 4254733 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.54 | 47.0 | 3.99e-01 | 95.5% | 82.2% |
| 3704070 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.54 | 47.0 | 3.60e-01 | 95.5% | 64.8% |
| 3607719 | 633.24.1.0 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain | 0.50 | 27.0 | 3.25e-01 | 84.2% | 78.8% |
D2
medium
residues 301-358