←Back to structures
BML_coassembly_scaffold_41_prodigal-single.1__X__X__00223
Bact-VirBML_coassembly_scaffold_41_prodigal-single.1__X__X__00223
Identity
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-77
Domain cluster:
rep: 04302015_21_scaffold_6_prodigal-single.1__X__X__00044__D6-64
CATH (96)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.79 | 63.0 | 5.48e-01 | 100.0% | 57.3% |
| 2khdA00 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 63.0 | 5.49e-01 | 100.0% | 62.0% |
| 1uw4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.72 | 61.0 | 5.55e-01 | 100.0% | 70.3% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 64.0 | 5.59e-01 | 100.0% | 67.3% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 60.0 | 5.33e-01 | 100.0% | 64.6% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 63.0 | 5.46e-01 | 100.0% | 63.6% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 58.0 | 5.46e-01 | 100.0% | 74.7% |
| 3vteA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.71 | 63.0 | 4.61e-01 | 100.0% | 47.6% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 58.0 | 5.48e-01 | 100.0% | 77.1% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.70 | 60.0 | 5.27e-01 | 100.0% | 73.1% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 62.0 | 5.58e-01 | 100.0% | 86.3% |
| 1j4wA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.69 | 58.0 | 5.75e-01 | 100.0% | 87.8% |
| 1p1lA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 61.0 | 5.37e-01 | 100.0% | 66.7% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.69 | 54.0 | 5.00e-01 | 84.1% | 67.4% |
| 2cq4A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.69 | 56.0 | 5.00e-01 | 100.0% | 63.9% |
| 5b08A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 60.0 | 5.34e-01 | 100.0% | 80.0% |
| 3ue2A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 62.0 | 5.71e-01 | 100.0% | 80.7% |
| 5d79A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.68 | 60.0 | 4.40e-01 | 100.0% | 49.7% |
| 2bvfA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.68 | 58.0 | 4.18e-01 | 100.0% | 32.4% |
| 3mcsA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 60.0 | 4.23e-01 | 100.0% | 32.9% |
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 58.0 | 5.42e-01 | 100.0% | 76.4% |
| 3e8oB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 59.0 | 5.23e-01 | 100.0% | 70.0% |
| 2bopA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.67 | 59.0 | 5.51e-01 | 100.0% | 81.2% |
| 4zosB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 59.0 | 5.27e-01 | 100.0% | 72.2% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.66 | 58.0 | 4.68e-01 | 100.0% | 81.8% |
| 2f7lA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.66 | 58.0 | 5.48e-01 | 100.0% | 95.3% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 58.0 | 5.24e-01 | 100.0% | 72.9% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 57.0 | 5.10e-01 | 100.0% | 72.5% |
| 1yz7A02 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.66 | 58.0 | 5.37e-01 | 100.0% | 77.8% |
| 3fgvA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 57.0 | 5.18e-01 | 100.0% | 73.1% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 57.0 | 5.16e-01 | 100.0% | 70.4% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.65 | 57.0 | 5.03e-01 | 100.0% | 68.9% |
| 5bmnA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.65 | 56.0 | 5.35e-01 | 100.0% | 94.0% |
| 2jvzA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.65 | 55.0 | 5.31e-01 | 100.0% | 82.5% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.65 | 57.0 | 5.13e-01 | 100.0% | 78.1% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 56.0 | 5.09e-01 | 100.0% | 74.5% |
| 1f5aA01 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.64 | 57.0 | 4.97e-01 | 100.0% | 67.3% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.64 | 55.0 | 4.78e-01 | 100.0% | 65.2% |
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.64 | 53.0 | 5.15e-01 | 100.0% | 82.3% |
| 1lq9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 56.0 | 4.79e-01 | 100.0% | 67.9% |
| 3bdeB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 55.0 | 4.95e-01 | 100.0% | 77.8% |
| 3i3wA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.63 | 53.0 | 5.20e-01 | 100.0% | 88.3% |
| 4i5sA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 49.0 | 4.36e-01 | 84.1% | 98.0% |
| 2crqA01 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.63 | 47.0 | 4.41e-01 | 81.2% | 65.1% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.62 | 49.0 | 3.89e-01 | 88.4% | 42.1% |
| 4mt1A06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.62 | 53.0 | 4.80e-01 | 100.0% | 81.2% |
| 7dluA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 54.0 | 5.20e-01 | 100.0% | 89.9% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 55.0 | 4.97e-01 | 100.0% | 82.3% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 53.0 | 4.90e-01 | 100.0% | 76.3% |
| 3hx9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 53.0 | 4.82e-01 | 100.0% | 71.4% |
| 2ctjA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.62 | 49.0 | 4.52e-01 | 100.0% | 66.3% |
| 1x7vA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 53.0 | 4.80e-01 | 100.0% | 71.4% |
| 1t0tV02 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.62 | 53.0 | 4.63e-01 | 100.0% | 68.5% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 53.0 | 4.82e-01 | 100.0% | 75.5% |
| 5k9fA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 53.0 | 4.71e-01 | 100.0% | 68.0% |
| 6c6uN00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.61 | 49.0 | 4.52e-01 | 100.0% | 66.3% |
| 5ixuA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 53.0 | 4.72e-01 | 100.0% | 76.5% |
| 1gd8A00 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.61 | 46.0 | 4.03e-01 | 81.2% | 85.7% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.61 | 52.0 | 4.45e-01 | 100.0% | 64.5% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 52.0 | 4.66e-01 | 100.0% | 73.3% |
| 2qycA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 52.0 | 4.69e-01 | 100.0% | 72.5% |
| 5bupA00 | 2.60.40.4100 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain | 0.61 | 53.0 | 4.08e-01 | 98.6% | 78.0% |
| 2nraC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 48.0 | 4.25e-01 | 87.0% | 77.5% |
| 4r6uA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 54.0 | 4.72e-01 | 98.6% | 72.8% |
| 3cueB00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.61 | 50.0 | 3.80e-01 | 91.3% | 43.1% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.61 | 54.0 | 4.27e-01 | 100.0% | 65.0% |
| 1vqyB01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 52.0 | 4.74e-01 | 100.0% | 83.2% |
| 4hjhA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.61 | 52.0 | 4.68e-01 | 100.0% | 87.1% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 53.0 | 4.56e-01 | 98.6% | 78.0% |
| 4fprB00 | 3.30.70.2910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 52.0 | 4.31e-01 | 100.0% | 68.8% |
| 2v94B00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 45.0 | 4.14e-01 | 84.1% | 61.3% |
| 3b8pA00 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.60 | 51.0 | 3.72e-01 | 100.0% | 46.9% |
| 3bb5A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 49.0 | 4.44e-01 | 100.0% | 77.7% |
| 2petA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.35e-01 | 98.6% | 78.4% |
| 1kyfA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.59 | 49.0 | 4.33e-01 | 100.0% | 76.1% |
| 1vm0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.59 | 47.0 | 4.31e-01 | 92.8% | 66.7% |
| 1kcvL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 52.0 | 4.57e-01 | 100.0% | 73.8% |
| 1x8dA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 4.50e-01 | 100.0% | 92.8% |
| 3pxpA02 | 3.30.450.180 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 49.0 | 3.65e-01 | 97.1% | 84.4% |
| 2c5dC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 51.0 | 4.49e-01 | 100.0% | 76.9% |
| 7n3yC01 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.58 | 45.0 | 2.86e-01 | 85.5% | 94.0% |
| 8ediA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 50.0 | 4.43e-01 | 98.6% | 78.8% |
| 1tulA00 | 2.70.40.20 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Baculovirus telokin-like protein 20 | 0.57 | 45.0 | 4.03e-01 | 100.0% | 59.8% |
| 1wjwA01 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.57 | 47.0 | 4.52e-01 | 100.0% | 90.6% |
| 2xzmP00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 42.0 | 3.39e-01 | 84.1% | 38.5% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.56 | 49.0 | 3.67e-01 | 98.6% | 96.6% |
| 1qu9A00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.56 | 42.0 | 3.49e-01 | 82.6% | 81.9% |
| 3hrgA01 | 3.30.420.250 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain | 0.56 | 42.0 | 3.38e-01 | 82.6% | 74.8% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 50.0 | 4.51e-01 | 100.0% | 87.0% |
| 7pwfD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.55 | 41.0 | 3.83e-01 | 81.2% | 66.3% |
| 4d53A00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.54 | 40.0 | 3.39e-01 | 84.1% | 52.6% |
| 2fmaA00 | 3.30.1490.140 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Amyloidogenic glycoprotein, copper-binding domain | 0.53 | 40.0 | 4.23e-01 | 88.4% | 94.9% |
| 4v19R01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.52 | 40.0 | 3.49e-01 | 85.5% | 81.2% |
| 6hhnA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 43.0 | 4.03e-01 | 100.0% | 75.0% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.51 | 40.0 | 4.09e-01 | 91.3% | 95.6% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.51 | 39.0 | 4.01e-01 | 87.0% | 89.4% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3726634 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.77 | 63.0 | 6.01e-01 | 100.0% | 77.5% |
| 3498546 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.76 | 63.0 | 6.15e-01 | 100.0% | 84.0% |
| 4113985 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.76 | 67.0 | 6.28e-01 | 100.0% | 80.0% |
| 3961062 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.75 | 68.0 | 6.19e-01 | 100.0% | 77.8% |
| 3513861 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.75 | 61.0 | 5.86e-01 | 100.0% | 78.8% |
| 4370515 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.74 | 67.0 | 5.90e-01 | 100.0% | 71.0% |
| 3728165 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.73 | 65.0 | 5.75e-01 | 100.0% | 74.0% |
| 3789491 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.72 | 62.0 | 5.86e-01 | 100.0% | 80.0% |
| 5038160 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.71 | 64.0 | 5.60e-01 | 100.0% | 68.0% |
| 5037829 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.71 | 64.0 | 5.67e-01 | 100.0% | 69.0% |
| 4212314 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.71 | 58.0 | 5.16e-01 | 98.6% | 63.0% |
| 4628847 | 323.1.1.12 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › TRI-like_N | 0.71 | 61.0 | 4.46e-01 | 100.0% | 72.5% |
| 4045508 | 323.1.1.12 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › TRI-like_N | 0.70 | 61.0 | 4.47e-01 | 100.0% | 75.4% |
| 5073850 | 304.43.1.6 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 › FLAD1_M | 0.70 | 61.0 | 6.01e-01 | 100.0% | 92.0% |
| 4503821 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.70 | 61.0 | 6.09e-01 | 98.6% | 97.1% |
| 4098707 | 304.159.1.1 ↗ | a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › Lant_dehydr_C | 0.70 | 60.0 | 5.36e-01 | 100.0% | 67.0% |
| 4937786 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.69 | 60.0 | 5.35e-01 | 100.0% | 68.0% |
| 4376910 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.69 | 61.0 | 5.51e-01 | 100.0% | 76.8% |
| 3477897 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.69 | 57.0 | 5.28e-01 | 100.0% | 71.1% |
| 5058378 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.68 | 61.0 | 5.39e-01 | 100.0% | 76.0% |
| 4023300 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.68 | 62.0 | 4.85e-01 | 100.0% | 50.0% |
| 3962561 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.68 | 60.0 | 4.78e-01 | 100.0% | 49.3% |
| 4022825 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.68 | 61.0 | 5.28e-01 | 100.0% | 75.2% |
| 5081155 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.68 | 59.0 | 5.44e-01 | 100.0% | 80.0% |
| 4936717 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.68 | 59.0 | 4.05e-01 | 100.0% | 30.4% |
| 4928095 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.67 | 60.0 | 5.00e-01 | 100.0% | 59.7% |
| 4225218 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.67 | 59.0 | 4.91e-01 | 100.0% | 56.0% |
| 3697122 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.67 | 59.0 | 5.11e-01 | 100.0% | 69.1% |
| 3808692 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.67 | 59.0 | 5.03e-01 | 100.0% | 64.3% |
| 3626410 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 59.0 | 5.08e-01 | 100.0% | 92.7% |
| 4591683 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.67 | 59.0 | 5.36e-01 | 100.0% | 75.8% |
| 3586334 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.67 | 58.0 | 5.39e-01 | 100.0% | 82.2% |
| 4095799 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 53.0 | 3.45e-01 | 84.1% | 21.1% |
| 3727518 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.67 | 58.0 | 5.04e-01 | 100.0% | 68.2% |
| 4959193 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.67 | 58.0 | 5.49e-01 | 100.0% | 81.2% |
| 4025874 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.66 | 59.0 | 5.15e-01 | 100.0% | 74.3% |
| 5002717 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.66 | 56.0 | 5.10e-01 | 100.0% | 72.0% |
| 3838674 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.66 | 57.0 | 4.99e-01 | 100.0% | 73.6% |
| 4079240 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.66 | 55.0 | 4.85e-01 | 100.0% | 61.9% |
| 3893192 | 327.11.2.26 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_N4BP1_1st | 0.66 | 56.0 | 5.54e-01 | 100.0% | 90.7% |
| 5039525 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.66 | 58.0 | 5.36e-01 | 100.0% | 76.7% |
| 3688261 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.66 | 57.0 | 5.10e-01 | 100.0% | 68.0% |
| 3494762 | 886.1.1.0 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain | 0.66 | 57.0 | 4.35e-01 | 100.0% | 44.1% |
| 3487954 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.66 | 57.0 | 5.41e-01 | 100.0% | 82.4% |
| 5160 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.66 | 57.0 | 5.10e-01 | 100.0% | 72.5% |
| 3971521 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.66 | 57.0 | 5.05e-01 | 100.0% | 72.4% |
| 3224621 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 56.0 | 5.48e-01 | 100.0% | 89.3% |
| 4048493 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.65 | 54.0 | 5.23e-01 | 100.0% | 82.5% |
| 3733897 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.65 | 56.0 | 4.92e-01 | 100.0% | 66.7% |
| 5035109 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.65 | 57.0 | 4.10e-01 | 100.0% | 34.3% |
| 4975078 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.65 | 56.0 | 4.96e-01 | 100.0% | 71.4% |
| 3627957 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.65 | 53.0 | 5.07e-01 | 100.0% | 77.5% |
| 3618706 | 207.1.1.247 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF28313 | 0.65 | 48.0 | 3.06e-01 | 84.1% | 15.3% |
| 5005033 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.65 | 56.0 | 5.35e-01 | 100.0% | 85.0% |
| 1039103 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.65 | 56.0 | 5.10e-01 | 100.0% | 73.7% |
| 4512382 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.64 | 56.0 | 4.78e-01 | 100.0% | 62.6% |
| 4182456 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.64 | 56.0 | 5.28e-01 | 100.0% | 85.9% |
| 3668465 | 304.120.1.9 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › MBTP1_N | 0.64 | 55.0 | 5.28e-01 | 100.0% | 90.0% |
| 4950106 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.64 | 57.0 | 4.27e-01 | 100.0% | 52.9% |
| 3924020 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.64 | 52.0 | 5.11e-01 | 100.0% | 85.3% |
| None | — | 0.64 | 48.0 | 3.41e-01 | 82.6% | 26.2% | |
| 3607653 | 206.1.3.46 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_IQCH | 0.64 | 55.0 | 3.52e-01 | 100.0% | 19.2% |
| 4264245 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.64 | 56.0 | 5.16e-01 | 100.0% | 77.8% |
| 5023832 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.64 | 55.0 | 5.41e-01 | 100.0% | 93.3% |
| 2512800 | 304.4.1.9 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase | 0.64 | 55.0 | 4.48e-01 | 100.0% | 56.9% |
| 4515869 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.63 | 52.0 | 4.91e-01 | 100.0% | 75.3% |
| 3557282 | 328.3.1.1 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C | 0.63 | 49.0 | 4.07e-01 | 84.1% | 48.3% |
| 4322056 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.63 | 54.0 | 5.11e-01 | 100.0% | 84.5% |
| 3164555 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.63 | 49.0 | 3.80e-01 | 84.1% | 41.3% |
| 3932886 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 53.0 | 4.87e-01 | 100.0% | 80.0% |
| 3638317 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 51.0 | 5.04e-01 | 100.0% | 86.7% |
| 5062974 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.62 | 53.0 | 4.25e-01 | 100.0% | 46.6% |
| 4562028 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.62 | 49.0 | 3.87e-01 | 87.0% | 42.1% |
| 3604263 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.62 | 53.0 | 4.25e-01 | 100.0% | 78.5% |
| 5017209 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.62 | 53.0 | 4.23e-01 | 100.0% | 78.0% |
| 1807387 | 304.4.1.15 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › NIPSNAP | 0.61 | 53.0 | 4.72e-01 | 100.0% | 76.5% |
| 165366 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.61 | 52.0 | 4.69e-01 | 100.0% | 72.5% |
| 4116735 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.61 | 52.0 | 4.76e-01 | 100.0% | 80.0% |
| 4948343 | 304.4.1.82 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF3303 | 0.61 | 52.0 | 4.86e-01 | 100.0% | 78.4% |
| 5035880 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.60 | 45.0 | 4.74e-01 | 82.6% | 100.0% |
| 3662789 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.59 | 50.0 | 4.80e-01 | 100.0% | 81.2% |
| 3963401 | 2484.1.1.61 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PilM_2 | 0.59 | 46.0 | 3.41e-01 | 84.1% | 35.0% |
| 4964284 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.59 | 45.0 | 4.63e-01 | 88.4% | 89.2% |
| 5035879 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.59 | 45.0 | 4.61e-01 | 84.1% | 89.2% |
| 4928530 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.59 | 45.0 | 4.36e-01 | 84.1% | 72.5% |
| 3968643 | 241.1.1.8 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2170 | 0.58 | 49.0 | 4.09e-01 | 100.0% | 65.9% |
| 5049413 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.58 | 51.0 | 3.75e-01 | 100.0% | 78.4% |
| 3597381 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.58 | 49.0 | 4.45e-01 | 100.0% | 78.0% |
| 4410723 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.57 | 47.0 | 4.21e-01 | 97.1% | 62.9% |
| 5049353 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.56 | 49.0 | 4.08e-01 | 100.0% | 72.8% |
| 4940779 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.56 | 43.0 | 4.36e-01 | 88.4% | 85.7% |
| 1144831 | 2484.1.1.63 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF3822 | 0.56 | 42.0 | 3.29e-01 | 82.6% | 68.6% |
| 3808918 | 387.1.5.7 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SCRL | 0.56 | 42.0 | 4.48e-01 | 81.2% | 96.7% |
| 3829654 | 387.1.5.7 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SCRL | 0.55 | 41.0 | 4.36e-01 | 85.5% | 93.1% |
| 3970675 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 43.0 | 3.17e-01 | 84.1% | 33.3% |
| 1697211 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.54 | 40.0 | 3.39e-01 | 84.1% | 52.6% |