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BML_coassembly_scaffold_41_prodigal-single.1__X__X__00256
Bact-VirBML_coassembly_scaffold_41_prodigal-single.1__X__X__00256
Identity
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-108
Domain cluster:
rep: MT491207.1__QLI49449.1__vBPaeMUSP18_08__00008__D3-97
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.61 | 40.0 | 4.16e-01 | 98.1% | 71.9% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.61 | 46.0 | 4.57e-01 | 98.1% | 76.9% |
| 1ml8A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.59 | 46.0 | 4.84e-01 | 96.2% | 91.8% |
| 1xkoB00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.55 | 49.0 | 4.22e-01 | 95.3% | 71.7% |
| 1lqlA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.53 | 43.0 | 4.42e-01 | 96.2% | 92.2% |
| 5ao2B02 | 3.30.70.2760 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 37.0 | 3.98e-01 | 100.0% | 87.6% |
| 3u37A02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.50 | 38.0 | 2.90e-01 | 82.1% | 34.3% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.50 | 33.0 | 3.72e-01 | 82.1% | 87.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4972532 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.61 | 48.0 | 5.18e-01 | 91.5% | 96.7% |
| 4355529 | 320.4.1.1 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain › TIMELESS_C | 0.58 | 41.0 | 3.67e-01 | 72.6% | 55.3% |
| 5072842 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.58 | 41.0 | 4.25e-01 | 73.6% | 84.0% |
| 3321720 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.57 | 39.0 | 3.89e-01 | 73.6% | 67.3% |
| 3226102 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.57 | 39.0 | 3.92e-01 | 72.6% | 69.4% |
| 5010433 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.50 | 37.0 | 2.77e-01 | 77.4% | 99.2% |
D2
high
residues 110-201
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gwlA00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.52 | 39.0 | 3.74e-01 | 79.3% | 84.0% |