←Back to structures
BML_coassembly_scaffold_50_prodigal-single.1__X__X__00035
Bact-VirBML_coassembly_scaffold_50_prodigal-single.1__X__X__00035
Identity
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 154-219
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 32.0 | 3.41e-01 | 84.8% | 50.0% |
| 1zuuA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 32.0 | 3.41e-01 | 87.9% | 51.8% |
| 6gfaA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.55 | 42.0 | 4.45e-01 | 90.9% | 98.2% |
| 1o97D01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 37.0 | 2.79e-01 | 72.7% | 76.2% |
| 2wvxA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 42.0 | 2.92e-01 | 93.9% | 91.0% |
| 1a73A00 | 3.90.75.10 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A | 0.52 | 40.0 | 3.18e-01 | 89.4% | 45.1% |
| 2im9A02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.51 | 44.0 | 3.49e-01 | 100.0% | 77.6% |
| 4nqrA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 38.0 | 3.00e-01 | 84.8% | 92.3% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 41.0 | 3.08e-01 | 92.4% | 47.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3168819 | 4076.3.1.3 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › SLD5_C | 0.60 | 43.0 | 4.24e-01 | 92.4% | 70.3% |
| 4975559 | 2005.1.1.10 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF | 0.59 | 41.0 | 2.91e-01 | 72.7% | 68.8% |
| 3400005 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.58 | 35.0 | 3.67e-01 | 86.4% | 65.0% |
| 4999817 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 31.0 | 3.61e-01 | 75.8% | 73.3% |
| 3388887 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.57 | 34.0 | 3.51e-01 | 86.4% | 60.0% |
| 4943922 | 2005.1.1.122 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF_alpha | 0.57 | 40.0 | 2.87e-01 | 74.2% | 71.4% |
| 5025991 | 2005.1.1.10 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF | 0.55 | 38.0 | 2.79e-01 | 74.2% | 71.2% |
| 4101307 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 41.0 | 2.23e-01 | 81.8% | 25.2% |
| 3202546 | 206.1.1.34 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase_fungal | 0.54 | 46.0 | 2.95e-01 | 98.5% | 40.4% |
| 4216608 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 32.0 | 3.05e-01 | 89.4% | 48.8% |
| 1204325 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.52 | 38.0 | 2.39e-01 | 81.8% | 62.1% |
| 4029640 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 37.0 | 2.31e-01 | 75.8% | 14.3% |
| 3438520 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.51 | 42.0 | 2.73e-01 | 93.9% | 34.6% |
| 3225123 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.51 | 29.0 | 3.33e-01 | 86.4% | 80.0% |
| 3640675 | 2008.1.1.98 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Pkinase_fungal | 0.51 | 43.0 | 2.84e-01 | 100.0% | 65.0% |