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BML_coassembly_scaffold_50_prodigal-single.1__X__X__00068
Bact-VirBML_coassembly_scaffold_50_prodigal-single.1__X__X__00068
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-205
Domain cluster:
rep: IMGVR_UViG_3300000928_002594-3300000928-OpTDRAFT_100169606__D4-180
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01507.26 best | PAPS_reduct | 37.1 | 4.50e-09 | 94.4% | 82.9% |
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dplA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.82 | 59.0 | 6.47e-01 | 99.5% | 87.8% |
| 1wy5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.80 | 67.0 | 6.43e-01 | 100.0% | 77.4% |
| 1ni5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.80 | 66.0 | 6.20e-01 | 100.0% | 72.7% |
| 1surA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.76 | 65.0 | 6.30e-01 | 100.0% | 80.9% |
| 1kqpA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.75 | 63.0 | 5.57e-01 | 100.0% | 62.7% |
| 4bwvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.75 | 62.0 | 5.87e-01 | 100.0% | 73.6% |
| 2oq2D00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.74 | 67.0 | 6.13e-01 | 100.0% | 74.8% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 46.0 | 5.53e-01 | 91.3% | 100.0% |
| 2cvbA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.66 | 39.0 | 4.02e-01 | 92.3% | 59.9% |
| 2jaxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.66 | 42.0 | 5.19e-01 | 87.2% | 100.0% |
| 3loqA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.66 | 47.0 | 5.39e-01 | 94.4% | 98.6% |
| 3s3tA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.65 | 47.0 | 5.45e-01 | 90.8% | 100.0% |
| 2z3vA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.65 | 45.0 | 5.33e-01 | 88.8% | 100.0% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 32.0 | 3.81e-01 | 70.9% | 68.1% |
| 3qyfA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.63 | 47.0 | 5.14e-01 | 91.8% | 91.5% |
| 1t9hA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 45.0 | 5.06e-01 | 93.9% | 95.9% |
| 3hgmA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.63 | 46.0 | 5.30e-01 | 87.8% | 100.0% |
| 2yv5A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 46.0 | 5.09e-01 | 98.0% | 96.2% |
| 7uuim01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 47.0 | 5.17e-01 | 90.3% | 97.5% |
| 6xl1A01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.61 | 45.0 | 4.98e-01 | 94.4% | 94.2% |
| 2b5xA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 35.0 | 3.93e-01 | 89.8% | 71.6% |
| 1vjtA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 32.0 | 4.06e-01 | 95.4% | 84.5% |
| 5gujA02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.61 | 32.0 | 3.87e-01 | 95.4% | 76.8% |
| 4hqsA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 34.0 | 4.03e-01 | 89.3% | 77.8% |
| 2gfqA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.60 | 29.0 | 4.11e-01 | 88.8% | 100.0% |
| 4mj7B00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.60 | 41.0 | 4.54e-01 | 95.4% | 88.2% |
| 1li5B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 52.0 | 4.79e-01 | 98.0% | 94.1% |
| 7zllA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.57 | 51.0 | 4.52e-01 | 94.4% | 96.7% |
| 5i45A00 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.57 | 40.0 | 4.03e-01 | 93.4% | 71.3% |
| 4kvfA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 35.0 | 3.84e-01 | 98.0% | 73.8% |
| 2dc1A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 34.0 | 4.08e-01 | 89.8% | 86.7% |
| 2rc5A02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.57 | 44.0 | 4.79e-01 | 92.9% | 97.5% |
| 5hvmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 43.0 | 4.25e-01 | 93.9% | 74.5% |
| 1xdiA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 30.0 | 3.74e-01 | 74.5% | 84.0% |
| 3aiiA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 52.0 | 4.45e-01 | 99.5% | 88.1% |
| 4uulA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 42.0 | 4.69e-01 | 87.2% | 100.0% |
| 2ok8A02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.56 | 41.0 | 4.54e-01 | 92.9% | 96.7% |
| 1gs5A00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.55 | 47.0 | 4.29e-01 | 89.8% | 93.0% |
| 3l8kA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 30.0 | 3.73e-01 | 74.0% | 83.1% |
| 5x1yA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 30.0 | 3.71e-01 | 74.0% | 84.4% |
| 2r9zA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 30.0 | 3.76e-01 | 90.3% | 87.3% |
| 5c3mC01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 39.0 | 4.26e-01 | 88.8% | 88.6% |
| 3aljA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 38.0 | 3.69e-01 | 94.4% | 65.9% |
| 1fzrA00 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.53 | 27.0 | 3.24e-01 | 81.1% | 72.1% |
| 6cmzA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 30.0 | 3.77e-01 | 74.5% | 92.4% |
| 3f1yA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 47.0 | 3.94e-01 | 94.9% | 70.1% |
| 5z3mB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 36.0 | 4.04e-01 | 93.9% | 90.1% |
| 4dqlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.51 | 39.0 | 4.28e-01 | 92.3% | 98.8% |
| 1h5qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 4.10e-01 | 96.4% | 87.7% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3489889 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.83 | 58.0 | 6.47e-01 | 79.6% | 86.9% |
| 5000185 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.83 | 68.0 | 5.50e-01 | 100.0% | 48.1% |
| 4499405 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.82 | 67.0 | 6.15e-01 | 100.0% | 67.8% |
| 5024161 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.81 | 70.0 | 6.31e-01 | 100.0% | 68.8% |
| 4044690 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.81 | 69.0 | 6.34e-01 | 100.0% | 70.6% |
| 3385512 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.81 | 68.0 | 6.25e-01 | 100.0% | 69.8% |
| 4178958 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.81 | 67.0 | 6.31e-01 | 100.0% | 73.0% |
| 4337374 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.80 | 67.0 | 6.26e-01 | 100.0% | 71.9% |
| 4051591 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.80 | 66.0 | 6.11e-01 | 100.0% | 70.2% |
| 4147679 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.80 | 67.0 | 6.30e-01 | 100.0% | 73.5% |
| 5035814 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.80 | 71.0 | 6.10e-01 | 100.0% | 62.4% |
| 3273951 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.80 | 70.0 | 6.21e-01 | 100.0% | 67.2% |
| 5011726 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.80 | 71.0 | 6.14e-01 | 100.0% | 63.5% |
| 4678704 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.80 | 67.0 | 6.25e-01 | 100.0% | 72.3% |
| 4351211 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.80 | 68.0 | 6.07e-01 | 100.0% | 65.7% |
| 4234668 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.80 | 67.0 | 6.26e-01 | 100.0% | 73.5% |
| 4466198 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.80 | 68.0 | 6.22e-01 | 100.0% | 70.6% |
| 4582525 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 66.0 | 6.16e-01 | 100.0% | 71.5% |
| 4202670 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 64.0 | 6.11e-01 | 100.0% | 72.4% |
| 4383441 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 71.0 | 6.04e-01 | 100.0% | 61.0% |
| 4094991 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 67.0 | 6.31e-01 | 100.0% | 74.3% |
| 4425942 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 68.0 | 5.80e-01 | 100.0% | 59.0% |
| None | — | 0.79 | 65.0 | 6.11e-01 | 100.0% | 71.7% | |
| None | — | 0.79 | 67.0 | 6.20e-01 | 100.0% | 71.2% | |
| 3174284 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.79 | 71.0 | 5.89e-01 | 100.0% | 57.2% |
| 4885769 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 68.0 | 6.30e-01 | 100.0% | 73.6% |
| 4312317 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 69.0 | 6.39e-01 | 100.0% | 74.2% |
| 4969138 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 71.0 | 5.93e-01 | 100.0% | 59.7% |
| 3700098 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.79 | 58.0 | 5.67e-01 | 100.0% | 69.2% |
| 5027047 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 68.0 | 6.16e-01 | 96.9% | 69.0% |
| 4484951 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 67.0 | 5.96e-01 | 100.0% | 65.3% |
| 4301950 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 65.0 | 6.10e-01 | 100.0% | 71.5% |
| 4124153 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 71.0 | 5.98e-01 | 100.0% | 61.0% |
| None | — | 0.78 | 71.0 | 6.31e-01 | 100.0% | 70.4% | |
| 4994415 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.78 | 70.0 | 6.45e-01 | 100.0% | 75.4% |
| 4943565 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.78 | 73.0 | 6.44e-01 | 100.0% | 71.3% |
| 4573155 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.78 | 69.0 | 6.26e-01 | 100.0% | 70.6% |
| 5035964 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.78 | 72.0 | 6.16e-01 | 100.0% | 64.5% |
| 3717378 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.78 | 67.0 | 5.81e-01 | 100.0% | 61.3% |
| 4938106 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.78 | 70.0 | 6.26e-01 | 100.0% | 70.0% |
| 4203886 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.78 | 68.0 | 6.05e-01 | 100.0% | 66.8% |
| 3614597 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.77 | 58.0 | 5.65e-01 | 100.0% | 71.0% |
| 4328387 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.77 | 67.0 | 6.23e-01 | 100.0% | 74.5% |
| 5001015 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.77 | 69.0 | 6.04e-01 | 100.0% | 65.4% |
| 3741392 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.77 | 70.0 | 6.38e-01 | 100.0% | 75.1% |
| 5054572 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.77 | 70.0 | 6.32e-01 | 100.0% | 73.3% |
| 4453324 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.76 | 67.0 | 6.18e-01 | 100.0% | 73.5% |
| 5051940 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.76 | 71.0 | 6.37e-01 | 100.0% | 74.9% |
| 4982815 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.76 | 69.0 | 5.80e-01 | 100.0% | 60.3% |
| 4977081 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.76 | 72.0 | 6.01e-01 | 100.0% | 62.2% |
| 4509365 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.75 | 66.0 | 5.96e-01 | 100.0% | 70.6% |
| 5000403 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.74 | 68.0 | 5.75e-01 | 100.0% | 62.5% |
| 4033672 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.73 | 49.0 | 5.90e-01 | 92.9% | 98.5% |
| 4971715 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.73 | 46.0 | 5.67e-01 | 92.9% | 96.2% |
| 3603397 | 2005.1.1.70 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DUF7411 | 0.73 | 64.0 | 5.81e-01 | 100.0% | 71.6% |
| 4962915 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.72 | 44.0 | 5.62e-01 | 86.2% | 100.0% |
| 4656730 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.72 | 69.0 | 6.09e-01 | 100.0% | 73.6% |
| 4963305 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.72 | 46.0 | 5.47e-01 | 94.9% | 93.2% |
| 5039083 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.70 | 45.0 | 5.55e-01 | 88.8% | 100.0% |
| 3603515 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.70 | 52.0 | 5.16e-01 | 99.0% | 73.2% |
| 3386240 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.69 | 65.0 | 5.74e-01 | 100.0% | 76.0% |
| 4968859 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.67 | 43.0 | 5.24e-01 | 90.8% | 100.0% |
| 3500954 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.66 | 50.0 | 5.47e-01 | 99.0% | 93.3% |
| 4963948 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.66 | 48.0 | 5.56e-01 | 91.8% | 100.0% |
| 3288720 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.66 | 47.0 | 5.47e-01 | 89.3% | 100.0% |
| 4999072 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 36.0 | 4.37e-01 | 74.5% | 81.5% |
| 4931780 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.64 | 49.0 | 5.27e-01 | 95.9% | 93.3% |
| 4954578 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.63 | 45.0 | 5.23e-01 | 88.3% | 100.0% |
| 3263185 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.60 | 34.0 | 3.70e-01 | 70.4% | 64.1% |
| 3948435 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.60 | 40.0 | 4.09e-01 | 92.3% | 68.2% |
| 3787994 | 7567.1.1.1 ↗ | a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L | 0.59 | 55.0 | 4.66e-01 | 99.5% | 80.6% |
| 4999144 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.59 | 50.0 | 5.26e-01 | 97.4% | 96.7% |
| 3993359 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.59 | 42.0 | 4.56e-01 | 94.4% | 87.3% |
| 4998822 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.58 | 39.0 | 3.92e-01 | 93.9% | 66.5% |
| 4167131 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.55 | 48.0 | 3.90e-01 | 93.9% | 81.6% |
| 4999365 | 7567.1.1.1 ↗ | a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L | 0.54 | 47.0 | 4.64e-01 | 95.9% | 88.3% |
| 3731744 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.53 | 41.0 | 4.40e-01 | 92.3% | 93.5% |
| 4444553 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.53 | 45.0 | 3.81e-01 | 90.8% | 62.8% |
| 3731294 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.52 | 46.0 | 4.06e-01 | 94.9% | 88.6% |
| 3423551 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.52 | 47.0 | 4.29e-01 | 96.4% | 96.1% |
| 5076778 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.52 | 36.0 | 3.74e-01 | 94.4% | 73.5% |
| 4003819 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.52 | 46.0 | 4.12e-01 | 98.0% | 83.9% |
| 3496226 | 2003.1.4.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain | 0.52 | 40.0 | 4.21e-01 | 98.0% | 88.9% |
| 3600257 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.51 | 41.0 | 4.40e-01 | 93.9% | 100.0% |
| 3210026 | 2003.1.1.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.51 | 45.0 | 4.21e-01 | 96.9% | 85.5% |
D2
high
residues 224-285
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lmkA00 | 1.20.50.60 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › ESP1, core domain | 0.59 | 41.0 | 4.22e-01 | 85.5% | 80.7% |
| 4q5rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 47.0 | 4.02e-01 | 96.8% | 85.7% |
| 3nfqB02 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.56 | 45.0 | 3.96e-01 | 98.4% | 74.1% |
| 1konA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.55 | 43.0 | 4.24e-01 | 87.1% | 86.8% |
| 1kkhA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.54 | 37.0 | 2.91e-01 | 72.6% | 58.8% |
| 3ltoA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.52 | 38.0 | 2.95e-01 | 75.8% | 67.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3650340 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 58.0 | 4.17e-01 | 100.0% | 55.7% |
| 3416035 | 104.1.1.0 ↗ | alpha duplicates or obligate multimers › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain | 0.53 | 39.0 | 4.08e-01 | 77.4% | 87.3% |
| 4821317 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.53 | 37.0 | 2.70e-01 | 75.8% | 62.9% |
| 3485812 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 35.0 | 3.60e-01 | 74.2% | 100.0% |
| 3924657 | 540.1.1.1 ↗ | few secondary structure elements › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › COX6B | 0.51 | 37.0 | 3.67e-01 | 82.3% | 84.3% |
D3
high
residues 294-353
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r1iA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.67 | 48.0 | 3.74e-01 | 88.3% | 35.4% |
| 3vkgA10 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 49.0 | 3.39e-01 | 80.0% | 38.3% |
| 3vkhA08 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 47.0 | 2.95e-01 | 80.0% | 21.7% |
| 4e69A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.62 | 43.0 | 2.73e-01 | 73.3% | 57.1% |
| 1vw4L02 | 1.10.246.170 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.61 | 53.0 | 4.73e-01 | 98.3% | 90.6% |
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 51.0 | 4.03e-01 | 98.3% | 84.7% |
| 7el5A01 | 1.10.2000.10 | Mainly Alpha › Orthogonal Bundle › Frizzled cysteine-rich domain › Frizzled cysteine-rich domain | 0.61 | 48.0 | 4.07e-01 | 93.3% | 52.7% |
| 3mvcB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 51.0 | 3.87e-01 | 96.7% | 76.0% |
| 3cm0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 49.0 | 3.47e-01 | 90.0% | 74.5% |
| 1cqxA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 51.0 | 3.88e-01 | 98.3% | 74.0% |
| 3d3qA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 40.0 | 3.03e-01 | 70.0% | 43.5% |
| 6bmeA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 51.0 | 4.07e-01 | 98.3% | 78.7% |
| 3eebA00 | 3.40.50.11050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain | 0.59 | 48.0 | 3.41e-01 | 93.3% | 93.7% |
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.59 | 47.0 | 4.11e-01 | 85.0% | 65.5% |
| 1tt5B02 | 1.10.10.520 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 | 0.58 | 50.0 | 4.60e-01 | 96.7% | 74.0% |
| 3crvA02 | 1.10.275.30 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › | 0.58 | 51.0 | 4.25e-01 | 100.0% | 86.1% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.58 | 45.0 | 4.15e-01 | 86.7% | 71.8% |
| 1hbgA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 49.0 | 3.75e-01 | 98.3% | 79.6% |
| 1ug3A02 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 48.0 | 3.87e-01 | 98.3% | 89.1% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 49.0 | 3.82e-01 | 100.0% | 80.0% |
| 5je8B02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.57 | 47.0 | 3.86e-01 | 100.0% | 91.4% |
| 1p49A02 | 1.10.287.550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 38.0 | 3.90e-01 | 71.7% | 79.7% |
| 3lcrB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 48.0 | 3.07e-01 | 95.0% | 48.2% |
| 4mspB02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 41.0 | 3.84e-01 | 95.0% | 64.0% |
| 1h99A02 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.55 | 45.0 | 3.80e-01 | 93.3% | 81.1% |
| 3f8tA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 41.0 | 2.65e-01 | 80.0% | 81.3% |
| 2ww5A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 43.0 | 3.00e-01 | 88.3% | 47.0% |
| 2z6vA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 47.0 | 2.90e-01 | 100.0% | 34.9% |
| 1mqsA02 | 3.40.50.1910 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 2 | 0.54 | 48.0 | 3.31e-01 | 100.0% | 44.7% |
| 3gaaB00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.54 | 45.0 | 3.11e-01 | 100.0% | 72.3% |
| 2kvdA02 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.53 | 30.0 | 3.04e-01 | 85.0% | 51.7% |
| 3r5dA01 | 3.30.70.2010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 43.0 | 3.50e-01 | 100.0% | 53.5% |
| 4c0eA02 | 1.25.40.800 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 41.0 | 2.90e-01 | 93.3% | 51.1% |
| 1yq1A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 41.0 | 3.48e-01 | 93.3% | 80.4% |
| 4xvhA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 39.0 | 2.79e-01 | 90.0% | 59.5% |
| 3ke0A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 43.0 | 2.68e-01 | 100.0% | 44.4% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3828275 | 219.1.1.71 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PDDEXK_6 | 0.70 | 58.0 | 4.14e-01 | 98.3% | 31.1% |
| 3426157 | 219.1.1.71 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PDDEXK_6 | 0.67 | 57.0 | 4.17e-01 | 98.3% | 34.5% |
| None | — | 0.66 | 52.0 | 3.95e-01 | 86.7% | 42.8% | |
| 3643457 | 219.1.1.71 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PDDEXK_6 | 0.66 | 55.0 | 3.92e-01 | 98.3% | 30.8% |
| 3465950 | 219.1.1.71 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PDDEXK_6 | 0.65 | 55.0 | 3.90e-01 | 98.3% | 29.7% |
| 4379647 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.64 | 46.0 | 3.40e-01 | 78.3% | 76.5% |
| 5045414 | 2006.1.2.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH | 0.64 | 53.0 | 3.73e-01 | 93.3% | 86.2% |
| 3743045 | 3409.1.1.0 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain | 0.63 | 56.0 | 4.27e-01 | 100.0% | 88.6% |
| 3712208 | 2484.8.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) | 0.61 | 45.0 | 2.88e-01 | 78.3% | 53.0% |
| 4980797 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.61 | 41.0 | 3.08e-01 | 70.0% | 29.3% |
| 3410892 | 101.1.1.505 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4769 | 0.60 | 52.0 | 4.56e-01 | 96.7% | 68.9% |
| 3193450 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.60 | 52.0 | 3.08e-01 | 98.3% | 15.1% |
| 3330762 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.60 | 45.0 | 3.63e-01 | 81.7% | 60.0% |
| 3729124 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.59 | 50.0 | 4.62e-01 | 100.0% | 96.2% |
| 3846696 | 543.1.1.2 ↗ | few secondary structure elements › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Fz | 0.59 | 46.0 | 3.80e-01 | 93.3% | 49.6% |
| 4394019 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.58 | 50.0 | 3.96e-01 | 98.3% | 80.0% |
| 3447137 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.58 | 42.0 | 3.06e-01 | 76.7% | 91.2% |
| 3741068 | 6076.1.1.0 ↗ | alpha arrays › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme | 0.58 | 52.0 | 4.43e-01 | 100.0% | 92.6% |
| 3510322 | 6076.1.1.0 ↗ | alpha arrays › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme | 0.57 | 51.0 | 4.39e-01 | 100.0% | 83.2% |
| 5082325 | 3705.1.1.3 ↗ | alpha arrays › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Phage_holin_6_1 | 0.57 | 44.0 | 4.24e-01 | 95.0% | 72.9% |
| 3961336 | 3781.1.1.0 ↗ | a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain | 0.57 | 42.0 | 3.75e-01 | 81.7% | 81.1% |
| 3599703 | 109.4.1.1775 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF5393 | 0.57 | 47.0 | 3.33e-01 | 91.7% | 63.9% |
| 3705931 | 109.4.1.958 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Vps41 | 0.56 | 47.0 | 2.79e-01 | 95.0% | 17.3% |
| 3547329 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.56 | 42.0 | 3.74e-01 | 95.0% | 56.5% |
| 3236264 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.56 | 42.0 | 4.25e-01 | 86.7% | 78.3% |
| 3469735 | 3409.1.1.0 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain | 0.56 | 46.0 | 3.36e-01 | 95.0% | 65.1% |
| 3176510 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.55 | 44.0 | 2.66e-01 | 88.3% | 30.3% |
| 303788 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 41.0 | 2.67e-01 | 83.3% | 82.8% |
| 3643664 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 40.0 | 3.78e-01 | 95.0% | 64.0% |
| 3742876 | 601.21.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr | 0.54 | 40.0 | 3.30e-01 | 100.0% | 40.8% |
| 5012651 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.54 | 47.0 | 4.25e-01 | 100.0% | 91.8% |
| 3541577 | 101.1.2.301 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF4616 | 0.54 | 46.0 | 4.23e-01 | 96.7% | 73.8% |
| 3731037 | 109.24.1.4 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › XPG_I_2 | 0.54 | 47.0 | 3.18e-01 | 98.3% | 82.2% |
| 3988415 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.54 | 46.0 | 3.82e-01 | 98.3% | 70.0% |
| 3922168 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.54 | 41.0 | 3.97e-01 | 96.7% | 71.4% |
| 4559316 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.53 | 40.0 | 3.87e-01 | 96.7% | 71.4% |
| 4962870 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.53 | 38.0 | 3.14e-01 | 96.7% | 39.0% |
| 3730945 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 47.0 | 3.07e-01 | 100.0% | 29.2% |
| 3533067 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.52 | 40.0 | 3.81e-01 | 95.0% | 70.0% |
| 4349885 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.51 | 45.0 | 2.59e-01 | 100.0% | 18.5% |
| 5064698 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.51 | 38.0 | 3.46e-01 | 86.7% | 73.3% |
| 3611276 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.51 | 40.0 | 3.47e-01 | 90.0% | 56.0% |
| 5040341 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.50 | 43.0 | 2.77e-01 | 100.0% | 90.2% |