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BML_coassembly_scaffold_50_prodigal-single.1__X__X__00091
Bact-VirBML_coassembly_scaffold_50_prodigal-single.1__X__X__00091
Identity
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-76
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 43.0 | 4.55e-01 | 93.0% | 76.6% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 43.0 | 4.56e-01 | 93.0% | 76.6% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.62 | 42.0 | 4.60e-01 | 87.3% | 86.0% |
| 1uebA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 40.0 | 4.18e-01 | 94.4% | 76.2% |
| 4obmA00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.59 | 50.0 | 3.47e-01 | 97.2% | 90.3% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 40.0 | 4.14e-01 | 93.0% | 76.9% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 31.0 | 3.48e-01 | 76.1% | 65.4% |
| 3go5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 37.0 | 3.82e-01 | 94.4% | 65.7% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 30.0 | 3.13e-01 | 71.8% | 50.0% |
| 1wfqA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 41.0 | 4.09e-01 | 94.4% | 75.3% |
| 5wb7E00 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.54 | 26.0 | 3.07e-01 | 100.0% | 63.8% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 47.0 | 4.11e-01 | 98.6% | 72.2% |
| 5sviB00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.54 | 34.0 | 3.73e-01 | 91.5% | 84.9% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 28.0 | 3.19e-01 | 74.6% | 64.7% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.52 | 28.0 | 3.10e-01 | 77.5% | 63.5% |
| 1wxcB01 | 3.30.1880.10 | Alpha Beta › 2-Layer Sandwich › protein ne1242 fold › protein ne1242 domain like | 0.52 | 37.0 | 3.85e-01 | 77.5% | 87.1% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 33.0 | 3.04e-01 | 81.7% | 47.9% |
| 3clqA02 | 3.90.1710.10 | Alpha Beta › Alpha-Beta Complex › Enterococcus faecalis V583 fold › Enterococcus faecalis V583 domain | 0.51 | 45.0 | 3.51e-01 | 100.0% | 98.1% |
| 5jldA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 38.0 | 2.73e-01 | 83.1% | 65.5% |
| 3fvcA03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.50 | 35.0 | 3.01e-01 | 71.8% | 72.7% |
| 7uqyB01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 36.0 | 2.63e-01 | 76.1% | 85.0% |
| 7cr6D01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.50 | 37.0 | 3.57e-01 | 78.9% | 73.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 140391 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.65 | 43.0 | 4.35e-01 | 93.0% | 69.0% |
| 4975151 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 38.0 | 4.19e-01 | 93.0% | 81.8% |
| 4992873 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 38.0 | 4.02e-01 | 90.1% | 82.8% |
| 3789879 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 44.0 | 3.85e-01 | 94.4% | 56.2% |
| 3722671 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.56 | 39.0 | 3.67e-01 | 91.5% | 58.9% |
| 3797728 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 34.0 | 3.25e-01 | 80.3% | 49.4% |
| 3593635 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 40.0 | 3.44e-01 | 76.1% | 57.3% |
| 5075187 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.55 | 36.0 | 3.86e-01 | 81.7% | 81.7% |
| 3592754 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 44.0 | 3.83e-01 | 93.0% | 72.3% |
| 3253321 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 40.0 | 4.20e-01 | 90.1% | 90.8% |
| 4999847 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.53 | 46.0 | 3.02e-01 | 98.6% | 25.2% |
| 3683940 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.53 | 26.0 | 3.13e-01 | 87.3% | 72.5% |
| 5022892 | 220.1.1.82 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 | 0.52 | 34.0 | 3.77e-01 | 76.1% | 89.1% |
| 4932189 | 4076.2.1.6 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › DUF1922 | 0.52 | 35.0 | 3.59e-01 | 83.1% | 72.9% |
| 4014158 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.51 | 44.0 | 3.00e-01 | 100.0% | 48.1% |
| 4465307 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 27.0 | 3.09e-01 | 91.5% | 66.0% |
| 3771405 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.16e-01 | 88.7% | 77.6% |
| 3362800 | 375.1.1.193 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_FGT1_1 | 0.50 | 26.0 | 3.00e-01 | 87.3% | 66.7% |
| 5001065 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.50 | 43.0 | 2.84e-01 | 97.2% | 23.4% |
| 5065152 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.50 | 43.0 | 2.86e-01 | 97.2% | 22.6% |
| 4998018 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.50 | 38.0 | 2.53e-01 | 84.5% | 90.0% |