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BML_coassembly_scaffold_50_prodigal-single.1__X__X__00227
Bact-VirBML_coassembly_scaffold_50_prodigal-single.1__X__X__00227
Identity
- Kingdom:
- phage
Quality
54.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-125
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bf6A02 | 2.40.220.10 | Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 | 0.56 | 30.0 | 3.90e-01 | 81.0% | 95.5% |
| 2joiA00 | 3.30.310.190 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.53 | 36.0 | 4.01e-01 | 91.7% | 88.5% |
| 1a87A01 | 3.30.1120.60 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin | 0.51 | 31.0 | 3.40e-01 | 95.9% | 73.2% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4539347 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.72 | 54.0 | 5.84e-01 | 81.0% | 94.0% |
| 5003468 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.65 | 52.0 | 5.58e-01 | 86.0% | 98.1% |
| 2084721 | 241.14.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C | 0.55 | 35.0 | 4.20e-01 | 95.0% | 100.0% |
| 5054766 | 331.1.1.30 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › PF27854 | 0.55 | 38.0 | 3.96e-01 | 91.7% | 74.8% |
| 4302852 | 331.22.1.2 ↗ | a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 | 0.55 | 38.0 | 3.36e-01 | 71.9% | 63.8% |
| 4964190 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 37.0 | 3.82e-01 | 71.1% | 100.0% |
| 184667 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.53 | 36.0 | 4.01e-01 | 91.7% | 88.5% |
| 5022991 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.52 | 34.0 | 3.78e-01 | 90.1% | 87.8% |
| 5053480 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.52 | 26.0 | 3.40e-01 | 86.8% | 91.7% |
| 5025174 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.50 | 28.0 | 3.47e-01 | 89.3% | 92.9% |
| 4959161 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.50 | 37.0 | 3.91e-01 | 91.7% | 87.0% |
D2
medium
residues 376-513
Domain cluster:
rep: MZ605292.1__QYW06510.1__uan_098__00098__D371-497
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.60 | 29.0 | 4.05e-01 | 70.3% | 100.0% |
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.57 | 33.0 | 3.32e-01 | 74.6% | 54.3% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.55 | 40.0 | 4.17e-01 | 84.1% | 84.0% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.50 | 38.0 | 3.64e-01 | 80.4% | 86.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3625974 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.67 | 41.0 | 4.90e-01 | 76.8% | 92.2% |
| 3893735 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.58 | 33.0 | 3.56e-01 | 75.4% | 66.1% |
| 3798524 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.57 | 34.0 | 3.74e-01 | 73.9% | 72.2% |
| 3387925 | 243.4.1.0 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like | 0.56 | 26.0 | 3.66e-01 | 93.5% | 93.8% |
| 3478366 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.54 | 31.0 | 3.48e-01 | 74.6% | 72.4% |
| 3572060 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.54 | 33.0 | 3.59e-01 | 73.2% | 70.8% |
| 4027440 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 29.0 | 3.27e-01 | 74.6% | 70.9% |
D3
medium
residues 514-575_663-722
D4
medium
residues 576-662