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BML_coassembly_scaffold_50_prodigal-single.1__X__X__00256

Bact-Vir

BML_coassembly_scaffold_50_prodigal-single.1__X__X__00256

Identity

Kingdom:
phage

Quality

87.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-175
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3n71A01 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.50 27.0 3.45e-01 91.4% 93.5%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5022524 70.4.1.0 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.71 26.0 4.23e-01 82.9% 87.1%
3945288 70.4.1.7 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › XM1_gp53_minor_capsid 0.69 55.0 6.04e-01 86.3% 100.0%
2984229 70.1.1.1 ↗ beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.54 25.0 3.75e-01 86.3% 100.0%
5002657 12.1.1.114 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF2341 0.53 22.0 3.01e-01 72.0% 74.1%
3907395 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.50 23.0 2.94e-01 92.6% 72.0%
3994328 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.50 20.0 2.73e-01 92.0% 69.4%