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BML_coassembly_scaffold_69_prodigal-single.1__X__X__00058

Bact-Vir

BML_coassembly_scaffold_69_prodigal-single.1__X__X__00058

Identity

Kingdom:
phage

Quality

85.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-75
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lsjA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 52.0 4.15e-01 90.4% 73.2%
6hq7B02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.63 55.0 3.81e-01 100.0% 40.0%
1b3uA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.62 53.0 3.18e-01 100.0% 15.1%
3ay5A01 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.58 45.0 3.72e-01 84.9% 57.9%
1ldjA02 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.57 50.0 4.25e-01 100.0% 90.2%
1o0sA02 1.20.1370.30 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › 0.57 44.0 3.96e-01 86.3% 63.9%
6t0bf00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.57 48.0 4.40e-01 100.0% 72.5%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 43.0 3.80e-01 84.9% 81.2%
1d3yB02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.54 41.0 2.97e-01 83.6% 49.3%
3mvpA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 44.0 3.47e-01 97.3% 69.8%
2veoA02 1.10.260.130 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.50 35.0 3.26e-01 95.9% 56.2%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3385031 109.4.1.1455 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27814 0.70 60.0 4.06e-01 94.5% 43.7%
3483432 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 57.0 3.77e-01 98.6% 34.0%
3847200 109.4.1.563 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3437 0.66 57.0 3.93e-01 98.6% 34.1%
3940187 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 57.0 3.74e-01 100.0% 30.0%
3179881 109.4.1.349 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIX1 0.65 56.0 4.01e-01 100.0% 41.3%
3616424 109.4.1.263 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UVSSA_N 0.64 56.0 4.32e-01 100.0% 50.0%
5015301 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 54.0 3.95e-01 98.6% 54.8%
4022135 3327.1.1.0 alpha bundles › HET-S N-terminal domain › HET-S N-terminal domain › HET-S N-terminal domain 0.60 50.0 3.51e-01 93.2% 91.8%
3313660 109.4.1.257 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 0.60 49.0 3.61e-01 91.8% 35.1%
3660190 109.4.1.935 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TOR1L1_N 0.60 45.0 3.50e-01 83.6% 36.6%
3936657 109.4.1.563 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3437 0.59 51.0 3.33e-01 98.6% 53.3%
5079491 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 52.0 4.08e-01 100.0% 47.7%
3435297 109.4.1.954 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EF3_N 0.57 50.0 3.94e-01 100.0% 49.4%
3649876 611.3.1.11 alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › TOR1L1_N 0.56 49.0 4.91e-01 98.6% 100.0%
4243775 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.55 43.0 4.23e-01 86.3% 92.5%
5012672 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.55 46.0 4.28e-01 90.4% 95.6%
5083098 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.53 42.0 3.84e-01 87.7% 77.0%