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BML_coassembly_scaffold_69_prodigal-single.1__X__X__00156

Bact-Vir

BML_coassembly_scaffold_69_prodigal-single.1__X__X__00156

Identity

Kingdom:
phage

Quality

79.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 78-138_222-243
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4efcA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.56 36.0 4.06e-01 97.6% 90.2%
4my0A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 41.0 3.49e-01 86.7% 72.9%
3pt9A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 41.0 2.93e-01 96.4% 85.3%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3956275 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.55 24.0 2.64e-01 98.8% 45.7%
D2 medium residues 33-71_141-218_249-325
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7w6yA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.55 21.0 3.17e-01 88.1% 81.5%
2xotA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 25.0 3.51e-01 88.7% 97.7%
1fltX00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 26.0 3.44e-01 92.3% 93.7%
4g5aA00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 23.0 3.11e-01 88.7% 80.8%
3o4oC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 27.0 3.52e-01 94.8% 98.0%
4x83A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 23.0 3.32e-01 94.3% 98.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4959429 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.57 24.0 3.00e-01 86.1% 61.7%
4273821 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.57 28.0 2.80e-01 100.0% 44.1%
3163561 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 24.0 3.52e-01 94.8% 96.5%
5028344 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 24.0 3.42e-01 89.2% 95.3%
3740491 224.1.1.1 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF 0.51 25.0 2.94e-01 85.6% 64.4%
5081345 11.1.1.608 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail 0.50 23.0 3.34e-01 90.7% 100.0%