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BML_coassembly_scaffold_69_prodigal-single.1__X__X__00172
Bact-VirBML_coassembly_scaffold_69_prodigal-single.1__X__X__00172
Identity
- Kingdom:
- phage
Quality
78.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-34
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00226.37 best | DnaJ | 41.2 | 2.00e-10 | 85.3% | 46.0% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rh8A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 56.0 | 3.29e-01 | 100.0% | 74.4% |
| 2a5yC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 49.0 | 3.12e-01 | 88.2% | 22.0% |
| 1zbuB01 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.64 | 50.0 | 3.96e-01 | 91.2% | 40.5% |
| 1z85B02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.64 | 52.0 | 3.42e-01 | 94.1% | 37.6% |
| 2f6uA00 | 3.20.20.390 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases | 0.62 | 49.0 | 3.03e-01 | 97.1% | 53.2% |
| 7k9cA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 49.0 | 3.86e-01 | 100.0% | 72.1% |
| 3s3uB00 | 3.60.70.12 | Alpha Beta › 4-Layer Sandwich › L-amino peptidase D-ALA esterase/amidase › L-amino peptidase D-ALA esterase/amidase | 0.60 | 49.0 | 2.84e-01 | 100.0% | 27.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3399672 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.93 | 80.0 | 6.32e-01 | 94.1% | 55.4% |
| 3318086 | 650.1.1.5 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › CPP1-like | 0.93 | 78.0 | 5.88e-01 | 91.2% | 41.3% |
| 3318833 | 650.1.1.5 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › CPP1-like | 0.92 | 76.0 | 6.24e-01 | 91.2% | 51.7% |
| 3296778 | 6113.1.1.2 ↗ | alpha duplicates or obligate multimers › Dimerization element domain in modular polyketide synthases › Dimerization element domain in modular polyketide synthases › Dimerization element domain in modular polyketide synthases › DnaJ | 0.90 | 70.0 | 5.74e-01 | 85.3% | 48.3% |
| 3681879 | 67.1.1.5 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ | 0.90 | 76.0 | 5.40e-01 | 94.1% | 35.8% |
| 3832236 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.88 | 80.0 | 6.19e-01 | 100.0% | 48.6% |
| 3783883 | 650.1.1.11 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › RPT | 0.88 | 74.0 | 5.55e-01 | 94.1% | 42.5% |
| 4029327 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.88 | 72.0 | 5.50e-01 | 91.2% | 42.7% |
| 3935055 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.87 | 78.0 | 5.81e-01 | 100.0% | 45.0% |
| 2028042 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.86 | 60.0 | 6.57e-01 | 76.5% | 100.0% |
| 3682977 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.84 | 73.0 | 5.61e-01 | 100.0% | 52.0% |
| 3880432 | 603.1.1.163 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27977 | 0.81 | 65.0 | 4.77e-01 | 91.2% | 34.4% |
| 3349724 | 397.7.1.0 ↗ | few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 | 0.73 | 52.0 | 5.18e-01 | 82.4% | 74.3% |
| 3180105 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.67 | 50.0 | 4.81e-01 | 85.3% | 75.0% |
| 3974775 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.65 | 50.0 | 3.67e-01 | 88.2% | 61.1% |
| 3235480 | 3727.1.1.0 ↗ | alpha arrays › Hsc70-interacting protein dimerization domain › Hsc70-interacting protein dimerization domain › Hsc70-interacting protein dimerization domain | 0.53 | 42.0 | 3.40e-01 | 97.1% | 42.7% |