←Back to structures
BML_coassembly_scaffold_69_prodigal-single.1__X__X__00236
Bact-VirBML_coassembly_scaffold_69_prodigal-single.1__X__X__00236
Identity
- Kingdom:
- phage
Quality
58.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-133
D2
high
residues 160-277
D3
medium
residues 306-354
D4
medium
residues 361-459
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_407201_prodigal-single.1__X__X__00080__D328-420
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zugB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.71 | 48.0 | 4.29e-01 | 99.0% | 48.6% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 41.0 | 4.25e-01 | 99.0% | 75.8% |
| 1lj5A02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.60 | 41.0 | 3.60e-01 | 71.7% | 100.0% |
| 1avgI00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 51.0 | 4.60e-01 | 99.0% | 83.1% |
| 5h9kA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 50.0 | 4.42e-01 | 99.0% | 72.1% |
| 2cztA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 50.0 | 4.35e-01 | 97.0% | 75.5% |
| 1gkaB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 50.0 | 4.23e-01 | 99.0% | 89.7% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 49.0 | 4.09e-01 | 98.0% | 66.1% |
| 1h4rA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 38.0 | 4.01e-01 | 89.9% | 75.8% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 48.0 | 4.13e-01 | 98.0% | 69.6% |
| 1epaA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 48.0 | 4.16e-01 | 99.0% | 73.1% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 47.0 | 4.02e-01 | 99.0% | 73.1% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 45.0 | 3.86e-01 | 88.9% | 85.2% |
| 4pz6A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.54 | 40.0 | 3.02e-01 | 77.8% | 78.4% |
| 3qkgA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 46.0 | 3.99e-01 | 99.0% | 73.2% |
| 6ghmC02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 34.0 | 3.93e-01 | 91.9% | 98.4% |
| 4kc5C03 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.53 | 38.0 | 2.83e-01 | 77.8% | 49.0% |
| 6x1kA01 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 42.0 | 4.01e-01 | 86.9% | 100.0% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 40.0 | 4.19e-01 | 82.8% | 97.8% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.52 | 45.0 | 4.48e-01 | 97.0% | 99.1% |
| 4kh8A01 | 2.40.128.540 | Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 | 0.52 | 46.0 | 3.90e-01 | 100.0% | 77.1% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.52 | 46.0 | 4.46e-01 | 100.0% | 96.3% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 45.0 | 3.75e-01 | 98.0% | 77.4% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.51 | 42.0 | 3.51e-01 | 89.9% | 52.3% |
| 2ksvA00 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.51 | 42.0 | 3.43e-01 | 89.9% | 72.4% |
| 1vwxf00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.51 | 36.0 | 3.53e-01 | 99.0% | 67.0% |
| 3w1eA03 | 2.40.10.410 | Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain | 0.51 | 35.0 | 3.68e-01 | 96.0% | 78.7% |
| 3v8uA04 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 43.0 | 3.88e-01 | 98.0% | 100.0% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 44.0 | 3.45e-01 | 96.0% | 65.9% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.50 | 44.0 | 4.32e-01 | 98.0% | 98.1% |
| 3rwxA01 | 2.40.128.340 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 43.0 | 4.10e-01 | 100.0% | 98.3% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3222614 | 220.1.1.158 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 | 0.60 | 50.0 | 4.73e-01 | 88.9% | 78.3% |
| 5046375 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.60 | 39.0 | 4.31e-01 | 91.9% | 83.7% |
| 3648015 | 9.1.1.21 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Cyclin_D1_bind | 0.59 | 51.0 | 4.24e-01 | 93.9% | 80.0% |
| 1828798 | 9.1.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Triabin | 0.59 | 51.0 | 4.45e-01 | 99.0% | 71.2% |
| 3875866 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.58 | 50.0 | 4.28e-01 | 98.0% | 69.4% |
| 4451493 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.58 | 50.0 | 4.24e-01 | 98.0% | 68.6% |
| 3251170 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 37.0 | 4.21e-01 | 87.9% | 90.0% |
| 5069776 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 44.0 | 4.17e-01 | 98.0% | 68.7% |
| 3681325 | 9.3.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N | 0.57 | 51.0 | 4.33e-01 | 100.0% | 87.9% |
| 5010009 | 12.3.1.40 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N | 0.57 | 39.0 | 3.24e-01 | 70.7% | 83.4% |
| 3696219 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 46.0 | 4.31e-01 | 89.9% | 76.8% |
| 3216442 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.56 | 39.0 | 3.11e-01 | 72.7% | 42.9% |
| 4139943 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.56 | 48.0 | 4.21e-01 | 99.0% | 98.1% |
| 3303919 | 59.1.1.16 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › PF30948 | 0.55 | 40.0 | 4.13e-01 | 75.8% | 86.3% |
| 1291144 | 9.1.1.27 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_C | 0.55 | 48.0 | 4.53e-01 | 94.9% | 93.2% |
| 3944596 | 9.1.1.27 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_C | 0.55 | 48.0 | 4.56e-01 | 94.9% | 94.8% |
| 3967227 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.55 | 49.0 | 4.07e-01 | 100.0% | 70.0% |
| 3388733 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.55 | 47.0 | 3.97e-01 | 96.0% | 70.0% |
| 5030040 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.55 | 38.0 | 2.85e-01 | 73.7% | 97.1% |
| 3745663 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.55 | 47.0 | 4.01e-01 | 99.0% | 91.9% |
| 3259422 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 47.0 | 4.23e-01 | 98.0% | 78.6% |
| 3989353 | 9.9.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 | 0.54 | 43.0 | 4.01e-01 | 84.8% | 100.0% |
| 3480200 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.54 | 36.0 | 4.10e-01 | 93.9% | 90.7% |
| 3245494 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.54 | 48.0 | 3.79e-01 | 99.0% | 73.7% |
| 5027751 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.53 | 41.0 | 3.64e-01 | 84.8% | 100.0% |
| 3803797 | 220.1.1.181 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_ULP | 0.53 | 43.0 | 4.09e-01 | 89.9% | 76.7% |
| 3181728 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.53 | 41.0 | 3.75e-01 | 89.9% | 63.1% |
| 4147907 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.52 | 47.0 | 4.18e-01 | 100.0% | 97.1% |
| 3784777 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.51 | 42.0 | 3.55e-01 | 89.9% | 53.3% |
| 5017958 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.51 | 44.0 | 3.91e-01 | 99.0% | 70.7% |
| 5022763 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 38.0 | 2.68e-01 | 80.8% | 33.2% |
| 3969556 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.50 | 44.0 | 3.67e-01 | 98.0% | 78.3% |