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BML_coassembly_scaffold_69_prodigal-single.1__X__X__00321
Bact-VirBML_coassembly_scaffold_69_prodigal-single.1__X__X__00321
Identity
- Kingdom:
- phage
Quality
84.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-71
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a2bA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.74 | 54.0 | 4.37e-01 | 78.3% | 66.7% |
| 2bhoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.68 | 48.0 | 4.14e-01 | 75.4% | 92.7% |
| 2bwnB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.66 | 48.0 | 3.67e-01 | 78.3% | 53.5% |
| 3a7rA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.64 | 54.0 | 3.79e-01 | 100.0% | 47.2% |
| 7nazA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 45.0 | 3.03e-01 | 76.8% | 33.8% |
| 2o7iA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 45.0 | 3.42e-01 | 76.8% | 84.2% |
| 3sk2A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.61 | 55.0 | 4.40e-01 | 98.6% | 74.2% |
| 3ly1D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 48.0 | 3.93e-01 | 85.5% | 61.2% |
| 3rriA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.61 | 51.0 | 4.18e-01 | 94.2% | 75.6% |
| 2g7jA00 | 3.90.1150.40 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Protein of unknown function DUF2002 | 0.61 | 45.0 | 3.88e-01 | 79.7% | 96.4% |
| 1whzA00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.60 | 49.0 | 4.96e-01 | 94.2% | 92.8% |
| 5yrzB00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.60 | 44.0 | 4.66e-01 | 84.1% | 94.8% |
| 1ecsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 50.0 | 4.25e-01 | 98.6% | 80.8% |
| 3hr8A02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.58 | 42.0 | 4.15e-01 | 78.3% | 72.0% |
| 1nkiA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 51.0 | 4.13e-01 | 98.6% | 67.2% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.58 | 47.0 | 4.73e-01 | 100.0% | 91.7% |
| 3gasA01 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.56 | 41.0 | 4.00e-01 | 79.7% | 100.0% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.56 | 48.0 | 4.31e-01 | 100.0% | 76.5% |
| 3zi1A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 45.0 | 3.76e-01 | 95.7% | 64.3% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 37.0 | 4.15e-01 | 73.9% | 100.0% |
| 3v7dD02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 44.0 | 2.88e-01 | 94.2% | 64.0% |
| 6m90A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 43.0 | 2.92e-01 | 92.8% | 85.4% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 46.0 | 3.81e-01 | 100.0% | 65.4% |
| 5lm7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 37.0 | 3.60e-01 | 72.5% | 78.2% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.52 | 42.0 | 2.70e-01 | 95.7% | 91.8% |
| 3udfA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 41.0 | 3.69e-01 | 85.5% | 100.0% |
| 4q66D01 | 6.20.120.50 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 33.0 | 3.30e-01 | 75.4% | 64.4% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 32.0 | 3.31e-01 | 71.0% | 67.2% |
| 3d0fA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 36.0 | 3.58e-01 | 76.8% | 95.9% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3253856 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.75 | 55.0 | 4.50e-01 | 78.3% | 74.4% |
| 3245738 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.72 | 53.0 | 4.55e-01 | 78.3% | 83.6% |
| 4504072 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.65 | 48.0 | 3.95e-01 | 78.3% | 48.0% |
| 3597793 | 5094.1.1.0 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like | 0.65 | 47.0 | 3.83e-01 | 78.3% | 49.6% |
| 3839435 | 330.9.1.0 ↗ | a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p | 0.64 | 50.0 | 4.94e-01 | 88.4% | 80.0% |
| 4140586 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.64 | 46.0 | 3.77e-01 | 78.3% | 42.9% |
| 3479080 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.62 | 53.0 | 4.91e-01 | 97.1% | 85.2% |
| 4325664 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.62 | 44.0 | 4.61e-01 | 73.9% | 90.0% |
| 4947543 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.62 | 52.0 | 5.10e-01 | 97.1% | 90.5% |
| 3710689 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.62 | 53.0 | 4.75e-01 | 100.0% | 82.0% |
| 4340568 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.61 | 54.0 | 4.40e-01 | 98.6% | 76.0% |
| 5055849 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.61 | 47.0 | 4.84e-01 | 89.9% | 93.8% |
| 3408265 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.59 | 51.0 | 3.40e-01 | 98.6% | 36.3% |
| 3602260 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.59 | 40.0 | 3.99e-01 | 72.5% | 97.3% |
| 4929392 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 46.0 | 4.25e-01 | 94.2% | 66.7% |
| 3992359 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.58 | 50.0 | 4.49e-01 | 100.0% | 77.0% |
| 5062306 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 49.0 | 4.49e-01 | 98.6% | 71.1% |
| 5073587 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 48.0 | 4.37e-01 | 92.8% | 67.4% |
| 3487063 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.58 | 52.0 | 4.63e-01 | 100.0% | 77.3% |
| 3402362 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.58 | 40.0 | 3.35e-01 | 73.9% | 53.8% |
| 4032952 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.57 | 49.0 | 3.44e-01 | 97.1% | 86.1% |
| 3486330 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 39.0 | 4.40e-01 | 82.6% | 98.0% |
| 4947558 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.57 | 48.0 | 4.43e-01 | 94.2% | 71.1% |
| 3721144 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.57 | 44.0 | 3.13e-01 | 82.6% | 69.8% |
| 3951067 | 3439.1.1.1 ↗ | a+b two layers › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain › Pup_ligase | 0.57 | 43.0 | 4.37e-01 | 84.1% | 92.9% |
| 3284357 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.57 | 41.0 | 3.39e-01 | 76.8% | 94.6% |
| 4238255 | 331.22.1.2 ↗ | a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 | 0.57 | 49.0 | 3.62e-01 | 100.0% | 49.7% |
| 3587052 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.56 | 47.0 | 4.28e-01 | 94.2% | 82.1% |
| 4940177 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 38.0 | 3.86e-01 | 71.0% | 82.9% |
| 3785800 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 44.0 | 3.07e-01 | 84.1% | 66.8% |
| 5065013 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.56 | 39.0 | 2.97e-01 | 72.5% | 95.6% |
| 3964178 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.56 | 41.0 | 3.42e-01 | 81.2% | 94.1% |
| 3958051 | 324.1.1.0 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like | 0.55 | 41.0 | 3.38e-01 | 81.2% | 92.6% |
| 5014724 | 295.1.1.51 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C | 0.54 | 37.0 | 3.37e-01 | 94.2% | 50.0% |
| 4022346 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.52 | 44.0 | 2.97e-01 | 100.0% | 69.9% |
| 1832945 | 2.1.1.78 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB | 0.52 | 36.0 | 3.15e-01 | 72.5% | 66.7% |
| 3696432 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.51 | 43.0 | 3.17e-01 | 95.7% | 76.9% |
| 4024725 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 35.0 | 3.71e-01 | 72.5% | 98.3% |