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BML_coassembly_scaffold_69_prodigal-single.1__X__X__00352
Bact-VirBML_coassembly_scaffold_69_prodigal-single.1__X__X__00352
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-20_88-128
Domain cluster:
representative
CATH (66)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.84 | 67.0 | 5.34e-01 | 89.1% | 45.6% |
| 4z32A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.84 | 78.0 | 6.31e-01 | 100.0% | 60.4% |
| 2codA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.84 | 69.0 | 5.63e-01 | 90.9% | 51.0% |
| 3cxbB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.80 | 67.0 | 5.37e-01 | 90.9% | 52.4% |
| 1faoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.80 | 68.0 | 5.52e-01 | 92.7% | 52.0% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.80 | 71.0 | 4.96e-01 | 100.0% | 33.9% |
| 1upqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.80 | 65.0 | 5.19e-01 | 89.1% | 49.5% |
| 4nswA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.80 | 66.0 | 5.22e-01 | 90.9% | 45.9% |
| 7ctpA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.79 | 66.0 | 5.00e-01 | 89.1% | 57.5% |
| 1u5dA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.79 | 66.0 | 5.22e-01 | 90.9% | 50.9% |
| 1dbhA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.78 | 64.0 | 4.85e-01 | 90.9% | 40.6% |
| 2vszB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.77 | 63.0 | 4.94e-01 | 90.9% | 56.4% |
| 1kz7C02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.77 | 63.0 | 4.71e-01 | 90.9% | 38.7% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.76 | 61.0 | 4.86e-01 | 89.1% | 44.5% |
| 3f5rA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.75 | 65.0 | 5.21e-01 | 100.0% | 48.7% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.73 | 59.0 | 4.69e-01 | 90.9% | 43.9% |
| 1bakA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.73 | 60.0 | 4.70e-01 | 92.7% | 44.5% |
| 1f9qD00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 57.0 | 5.35e-01 | 94.5% | 72.7% |
| 2gdqA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.71 | 56.0 | 4.45e-01 | 85.5% | 58.9% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.67 | 52.0 | 4.87e-01 | 89.1% | 77.5% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 57.0 | 5.38e-01 | 98.2% | 80.6% |
| 1zxtA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 51.0 | 5.02e-01 | 98.2% | 78.7% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 51.0 | 4.85e-01 | 96.4% | 71.2% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 49.0 | 4.69e-01 | 94.5% | 68.7% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 56.0 | 5.28e-01 | 94.5% | 78.8% |
| 1b44D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 53.0 | 4.35e-01 | 92.7% | 56.6% |
| 1xezA04 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.63 | 52.0 | 3.91e-01 | 90.9% | 57.8% |
| 1eigA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 51.0 | 4.65e-01 | 98.2% | 68.5% |
| 2mp1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 49.0 | 4.45e-01 | 96.4% | 63.6% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.62 | 47.0 | 4.22e-01 | 81.8% | 66.2% |
| 3pg7A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 48.0 | 3.96e-01 | 90.9% | 44.5% |
| 4phtY02 | 3.30.420.370 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain | 0.62 | 43.0 | 4.21e-01 | 94.5% | 66.1% |
| 1aisA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.62 | 46.0 | 3.96e-01 | 80.0% | 94.3% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 46.0 | 4.33e-01 | 80.0% | 71.6% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 43.0 | 3.08e-01 | 100.0% | 25.5% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 49.0 | 4.50e-01 | 92.7% | 67.6% |
| 2q0lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 46.0 | 3.19e-01 | 83.6% | 96.8% |
| 3apqA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 45.0 | 3.64e-01 | 83.6% | 79.3% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 45.0 | 3.94e-01 | 92.7% | 52.2% |
| 5t1dB00 | 3.10.390.20 | Alpha Beta › Roll › SAND domain › Viral glycoprotein L | 0.60 | 46.0 | 3.78e-01 | 83.6% | 47.5% |
| 3v5nB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 41.0 | 2.88e-01 | 72.7% | 74.5% |
| 5wb2B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 48.0 | 4.39e-01 | 94.5% | 68.5% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.59 | 50.0 | 3.84e-01 | 100.0% | 69.9% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.59 | 43.0 | 3.65e-01 | 83.6% | 88.5% |
| 4fdaA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 47.0 | 3.14e-01 | 92.7% | 52.3% |
| 1gd5A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 42.0 | 3.41e-01 | 85.5% | 78.5% |
| 5xbfA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 43.0 | 3.83e-01 | 89.1% | 52.3% |
| 3d1cA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 46.0 | 3.59e-01 | 87.3% | 76.3% |
| 1hyuA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 50.0 | 3.51e-01 | 100.0% | 61.0% |
| 4euyA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 42.0 | 3.73e-01 | 83.6% | 90.7% |
| 5twbA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 44.0 | 3.00e-01 | 87.3% | 85.5% |
| 5t5lA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 47.0 | 3.25e-01 | 100.0% | 68.1% |
| 1khiA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 40.0 | 3.77e-01 | 87.3% | 59.7% |
| 3dmeA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 47.0 | 3.23e-01 | 100.0% | 59.6% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 45.0 | 4.08e-01 | 92.7% | 65.8% |
| 6muwM00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.55 | 44.0 | 3.08e-01 | 94.5% | 87.3% |
| 3i7mA00 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.55 | 43.0 | 3.48e-01 | 96.4% | 72.2% |
| 2r1bA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 47.0 | 3.27e-01 | 100.0% | 62.1% |
| 1nijA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 3.03e-01 | 92.7% | 31.8% |
| 3d0fA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 41.0 | 3.81e-01 | 87.3% | 95.9% |
| 5ygqA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 42.0 | 2.85e-01 | 89.1% | 45.7% |
| 4dzoA02 | 3.30.457.60 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.52 | 38.0 | 3.50e-01 | 81.8% | 74.0% |
| 2ra9A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.52 | 42.0 | 4.00e-01 | 100.0% | 89.0% |
| 4bpnW02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.52 | 34.0 | 3.49e-01 | 94.5% | 72.5% |
| 3kewB02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.52 | 44.0 | 3.24e-01 | 94.5% | 80.6% |
| 2wm1A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 45.0 | 2.76e-01 | 100.0% | 25.9% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3707723 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.93 | 86.0 | 6.76e-01 | 100.0% | 55.2% |
| 3596153 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.91 | 85.0 | 6.63e-01 | 100.0% | 55.6% |
| 3274553 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.87 | 71.0 | 5.62e-01 | 90.9% | 45.7% |
| 3538314 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.86 | 71.0 | 5.38e-01 | 89.1% | 43.3% |
| 4488977 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.85 | 72.0 | 5.21e-01 | 90.9% | 39.3% |
| 3595300 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.85 | 69.0 | 5.64e-01 | 90.9% | 50.5% |
| 3865191 | 220.1.1.61 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 | 0.85 | 77.0 | 6.03e-01 | 100.0% | 57.3% |
| 3773509 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.84 | 67.0 | 6.53e-01 | 90.9% | 78.3% |
| 5060461 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.84 | 69.0 | 6.19e-01 | 90.9% | 65.3% |
| 3497731 | 220.1.1.56 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH | 0.84 | 75.0 | 5.57e-01 | 100.0% | 45.2% |
| 4979972 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.83 | 66.0 | 4.86e-01 | 89.1% | 34.8% |
| 5051533 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.83 | 66.0 | 5.17e-01 | 89.1% | 42.7% |
| 3252809 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.83 | 70.0 | 5.20e-01 | 90.9% | 39.2% |
| 3265348 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.83 | 65.0 | 5.34e-01 | 85.5% | 48.4% |
| 3595376 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.83 | 67.0 | 4.70e-01 | 89.1% | 30.0% |
| 3998421 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.83 | 69.0 | 6.53e-01 | 90.9% | 86.2% |
| 5016434 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.82 | 68.0 | 6.05e-01 | 89.1% | 78.7% |
| 3269367 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.82 | 69.0 | 5.65e-01 | 90.9% | 61.1% |
| 3939128 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.82 | 65.0 | 5.18e-01 | 90.9% | 43.6% |
| 3888868 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.82 | 69.0 | 5.30e-01 | 92.7% | 50.0% |
| 3891023 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.82 | 68.0 | 4.66e-01 | 90.9% | 28.3% |
| 4543309 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.81 | 68.0 | 5.27e-01 | 90.9% | 44.3% |
| 4396540 | 220.1.1.12 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 | 0.81 | 75.0 | 5.03e-01 | 100.0% | 30.3% |
| 3624498 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.81 | 68.0 | 5.11e-01 | 92.7% | 40.0% |
| 3257454 | 220.1.1.12 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 | 0.81 | 70.0 | 4.67e-01 | 100.0% | 25.9% |
| 3211631 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 72.0 | 4.57e-01 | 100.0% | 31.3% |
| 3797728 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.80 | 66.0 | 5.65e-01 | 90.9% | 57.6% |
| 3214129 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.80 | 69.0 | 5.28e-01 | 100.0% | 42.4% |
| 3273822 | 220.1.1.12 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 | 0.80 | 74.0 | 5.04e-01 | 100.0% | 37.1% |
| 3211867 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.79 | 66.0 | 5.19e-01 | 90.9% | 46.4% |
| 1177137 | 220.1.1.43 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH | 0.79 | 65.0 | 5.31e-01 | 90.9% | 54.0% |
| 3255344 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.79 | 71.0 | 5.44e-01 | 100.0% | 50.0% |
| 4929228 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.79 | 61.0 | 4.98e-01 | 90.9% | 46.5% |
| 3245418 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.78 | 70.0 | 5.53e-01 | 100.0% | 50.9% |
| 4047317 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.78 | 69.0 | 5.45e-01 | 100.0% | 78.8% |
| 3354048 | 220.1.1.163 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7046 | 0.78 | 65.0 | 5.25e-01 | 90.9% | 50.0% |
| 3766117 | 220.1.1.164 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26089 | 0.78 | 64.0 | 4.82e-01 | 90.9% | 57.7% |
| 3581945 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.78 | 59.0 | 5.75e-01 | 90.9% | 75.0% |
| 3620222 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.77 | 66.0 | 5.01e-01 | 92.7% | 46.7% |
| 3217638 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.76 | 66.0 | 5.93e-01 | 98.2% | 70.7% |
| 3956353 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.76 | 63.0 | 5.43e-01 | 90.9% | 63.5% |
| 3290954 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.76 | 62.0 | 5.19e-01 | 90.9% | 56.8% |
| 1015798 | 220.1.1.44 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N | 0.76 | 65.0 | 5.48e-01 | 100.0% | 56.2% |
| 3298632 | 220.1.1.44 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N | 0.76 | 67.0 | 5.52e-01 | 100.0% | 55.0% |
| 3230768 | 207.1.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 | 0.75 | 65.0 | 4.41e-01 | 98.2% | 27.2% |
| 3249490 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.75 | 63.0 | 4.89e-01 | 92.7% | 44.3% |
| 4169409 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.74 | 64.0 | 5.10e-01 | 100.0% | 71.9% |
| 3536413 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.74 | 60.0 | 4.80e-01 | 90.9% | 46.4% |
| 3256547 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.73 | 56.0 | 4.68e-01 | 90.9% | 47.0% |
| 5051984 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.72 | 62.0 | 4.89e-01 | 100.0% | 65.0% |
| 4933350 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.71 | 61.0 | 4.72e-01 | 98.2% | 45.3% |
| 3854547 | 220.1.1.208 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28207 | 0.71 | 59.0 | 4.69e-01 | 100.0% | 45.0% |
| 4533523 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.70 | 59.0 | 5.68e-01 | 98.2% | 81.5% |
| 3570691 | 220.1.1.208 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28207 | 0.70 | 58.0 | 4.74e-01 | 100.0% | 49.1% |
| 4940177 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 45.0 | 4.22e-01 | 85.5% | 52.9% |
| 3645767 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 58.0 | 3.78e-01 | 100.0% | 20.8% |
| 4294910 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.69 | 52.0 | 5.27e-01 | 94.5% | 83.6% |
| 5055213 | 2484.1.1.68 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 | 0.68 | 56.0 | 3.96e-01 | 96.4% | 38.1% |
| 5001380 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 50.0 | 4.46e-01 | 85.5% | 55.0% |
| 3487901 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.66 | 56.0 | 5.17e-01 | 100.0% | 84.0% |
| 319225 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.66 | 50.0 | 4.52e-01 | 96.4% | 60.8% |
| 3912274 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.64 | 51.0 | 4.80e-01 | 94.5% | 71.4% |
| 4959884 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.61 | 47.0 | 4.78e-01 | 83.6% | 94.5% |
| 5000042 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.61 | 49.0 | 3.51e-01 | 100.0% | 71.7% |
| 2388239 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.59 | 48.0 | 4.39e-01 | 94.5% | 68.5% |
| 4325664 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.59 | 39.0 | 3.83e-01 | 85.5% | 63.3% |
| 3474627 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.59 | 42.0 | 3.43e-01 | 80.0% | 77.4% |
| 5051952 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.58 | 49.0 | 3.88e-01 | 92.7% | 83.6% |
| 4965528 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.58 | 45.0 | 2.98e-01 | 85.5% | 21.8% |
| 3539226 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.58 | 41.0 | 3.30e-01 | 78.2% | 75.0% |
| 3485043 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.58 | 46.0 | 3.05e-01 | 90.9% | 45.3% |
| 4945986 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.56 | 45.0 | 3.19e-01 | 100.0% | 76.3% |
| 3917795 | 5.1.4.173 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_2nd | 0.54 | 42.0 | 2.63e-01 | 87.3% | 18.6% |
| 1832945 | 2.1.1.78 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB | 0.53 | 41.0 | 3.40e-01 | 87.3% | 66.7% |
| 3519316 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.51 | 40.0 | 2.90e-01 | 87.3% | 73.9% |
D2
high
residues 24-86
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3s93A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.53 | 41.0 | 3.83e-01 | 100.0% | 66.3% |
| 1ksiA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.53 | 36.0 | 2.31e-01 | 76.2% | 76.7% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 31.0 | 2.45e-01 | 100.0% | 24.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4203469 | 375.1.1.47 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC | 0.67 | 38.0 | 4.00e-01 | 100.0% | 61.8% |
| 4239498 | 375.1.1.47 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC | 0.62 | 36.0 | 3.79e-01 | 100.0% | 63.6% |
| 3898995 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.51 | 34.0 | 3.44e-01 | 71.4% | 67.7% |
| 3586741 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.51 | 34.0 | 3.42e-01 | 71.4% | 67.7% |
| 4020975 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.59e-01 | 100.0% | 56.2% |