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BRO

Euk-Vir

Pseudalatia_unipuncta_granulovirus

BRO__YP_003422457__Pseudalatia_unipuncta_granulovirus__36355

Identity

Accession:: YP_003422457 ↗
Protein ID:: BRO
Kingdom:: euk

Quality

71.1 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Pseudalatia_unipuncta_granulovirus

TaxID: 36355

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-103_116-161

PDB

D2 high residues 263-286_320-417

PDB

Domain cluster: rep: BV_ODV-E26__YP_009666490__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D138-232

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1gmuA01	3.30.70.790	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain	0.74	33.0	4.35e-01	70.5%	76.1%
1b4bA00	3.30.1360.40	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 ›	0.69	39.0	4.91e-01	77.0%	94.4%
3dv8A02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	32.0	3.80e-01	74.6%	89.7%
2fmyA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	33.0	3.91e-01	73.8%	92.7%
2gqfA01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.52	37.0	2.92e-01	73.0%	80.3%
3udfA01	3.40.710.10	Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily	0.52	36.0	2.59e-01	72.1%	42.3%
2a5yC03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	30.0	3.14e-01	73.8%	62.2%
3mr0A01	3.30.450.20	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain	0.51	28.0	2.91e-01	100.0%	56.4%
1vw4700	3.30.780.10	Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain	0.50	40.0	4.29e-01	91.0%	98.1%

ECOD (18)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4994431	306.6.1.0 ↗	a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like	0.72	39.0	5.09e-01	70.5%	98.5%
5033197	306.6.1.0 ↗	a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like	0.70	38.0	5.01e-01	71.3%	100.0%
5041293	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.60	42.0	4.78e-01	73.0%	95.6%
2409672	3016.1.1.0 ↗	a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases	0.60	38.0	4.07e-01	76.2%	74.8%
5046209	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.59	39.0	4.56e-01	78.7%	97.6%
None	—		0.58	37.0	3.19e-01	71.3%	41.4%
4538391	1137.1.1.1 ↗	a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase	0.56	37.0	3.52e-01	79.5%	55.3%
3972982	2003.1.2.0 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain	0.53	38.0	3.00e-01	73.0%	81.6%
None	—		0.53	37.0	2.96e-01	73.0%	79.2%
None	—		0.53	37.0	2.97e-01	73.0%	80.8%
3761667	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.52	28.0	3.43e-01	82.8%	80.0%
5075473	241.6.1.2 ↗	a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › ARPC4	0.52	34.0	3.14e-01	73.8%	49.4%
4090346	101.1.2.209 ↗	alpha arrays › HTH › HTH › winged helix domain › MJ1010-like_2nd	0.52	25.0	3.33e-01	73.0%	90.0%
None	—		0.52	36.0	2.76e-01	99.2%	29.5%
3534443	221.1.1.12 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RBD	0.51	30.0	3.40e-01	81.1%	80.0%
3603159	101.1.2.209 ↗	alpha arrays › HTH › HTH › winged helix domain › MJ1010-like_2nd	0.51	28.0	3.39e-01	73.8%	88.6%
4927189	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.51	29.0	3.23e-01	73.8%	69.5%
3200763	2003.1.2.29 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8	0.50	44.0	3.41e-01	98.4%	79.3%

D3 medium residues 207-262

PDB

Domain cluster: rep: bro__YP_009506178__Trichoplusia_ni_granulovirus_LBIV-12__1916701__D207-262