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BTB_domain_containing_protein

Euk-Vir

Pandoravirus_dulcis

BTB_domain_containing_protein__YP_008319955__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_008319955 ↗
Protein ID:
BTB_domain_containing_protein
Kingdom:
euk

Quality

71.1 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (43 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 219-329
PDB
D2 medium residues 5-127
PDB
Domain cluster: rep: kelch-containing_protein__YP_010085636__Akhmeta_virus__2200830__D2-108
D3 medium residues 148-218
PDB
Domain cluster: rep: BTB_domain_containing_protein__YP_009483667__Pandoravirus_quercus__2107709__D192-260
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qclA05 1.10.132.60 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain 0.70 52.0 4.01e-01 81.7% 95.2%
1gq2A01 3.40.50.10380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Malic enzyme, N-terminal domain 0.68 56.0 3.91e-01 94.4% 68.2%
1ra6A03 1.20.960.20 Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › 0.66 57.0 5.39e-01 100.0% 93.1%
2qyuA02 1.25.40.300 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein 0.65 56.0 4.12e-01 98.6% 51.8%
4i43B02 3.30.43.40 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain 0.63 48.0 4.17e-01 83.1% 88.6%
5xdcB01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.61 47.0 4.13e-01 85.9% 79.3%
1vquA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.60 44.0 4.58e-01 80.3% 97.0%
4gtnA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.59 45.0 4.53e-01 85.9% 95.9%
4muoA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.58 44.0 4.39e-01 83.1% 97.2%
1hx8A01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 49.0 4.25e-01 98.6% 89.8%
2mtfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 3.41e-01 71.8% 76.3%
1o82A00 1.20.225.10 Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 0.54 35.0 3.54e-01 70.4% 65.7%
1u7kA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.54 43.0 3.68e-01 95.8% 91.6%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 35.0 3.65e-01 70.4% 84.8%
5ez1A01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.50 35.0 3.19e-01 73.2% 91.0%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3898945 604.17.1.0 ↗ alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like 0.73 50.0 5.24e-01 71.8% 86.2%
3714000 109.4.1.12 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clathrin 0.70 52.0 3.37e-01 80.3% 25.7%
4940672 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.69 53.0 4.70e-01 84.5% 70.5%
3648520 2004.1.1.135 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.64 46.0 3.07e-01 78.9% 25.7%
3325322 532.2.1.0 ↗ alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains 0.63 47.0 4.54e-01 80.3% 90.0%
3254006 189.1.1.2 ↗ alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP 0.62 46.0 3.40e-01 83.1% 55.2%
3272644 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 53.0 3.08e-01 100.0% 55.7%
4503392 184.1.1.1 ↗ alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N 0.57 41.0 4.17e-01 78.9% 95.7%
3238415 109.27.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain 0.55 44.0 4.46e-01 93.0% 92.9%
4992487 316.2.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Rv2827c C-terminal domain-like › Rv2827c C-terminal domain-like 0.53 43.0 3.55e-01 93.0% 81.4%
4027771 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.53 41.0 3.05e-01 87.3% 88.6%
5048961 1075.1.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane 0.52 38.0 2.78e-01 83.1% 91.8%
3890414 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 36.0 3.67e-01 74.6% 100.0%
5028095 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.50 34.0 3.03e-01 70.4% 71.4%