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BV-E31
Euk-VirPlodia_interpunctella_granulovirus
BV-E31__YP_009330189__Plodia_interpunctella_granulovirus__262175
Identity
- Accession:
- YP_009330189 ↗
- Protein ID:
- BV-E31
- Kingdom:
- euk
Quality
78.4
mean pLDDT
Taxonomy
TaxID: 262175
Cluster
View cluster (51 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 28-82_121-189
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c7qB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.59 | 52.0 | 4.56e-01 | 99.2% | 65.0% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.59 | 29.0 | 3.76e-01 | 100.0% | 86.4% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.58 | 24.0 | 3.44e-01 | 96.8% | 83.6% |
| 2m2lA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 22.0 | 2.91e-01 | 99.2% | 61.2% |
| 1v8wA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 46.0 | 4.27e-01 | 96.8% | 71.4% |
| 1yfbA00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.55 | 21.0 | 3.19e-01 | 71.0% | 82.7% |
| 2r31A01 | 3.30.2180.10 | Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like | 0.50 | 21.0 | 2.78e-01 | 100.0% | 68.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3429075 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.57 | 22.0 | 2.81e-01 | 96.0% | 57.3% |
| 4609498 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.53 | 22.0 | 2.63e-01 | 96.0% | 53.8% |
| 3334359 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.53 | 47.0 | 4.15e-01 | 96.8% | 80.6% |
| 3818481 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 47.0 | 3.81e-01 | 96.8% | 65.1% |
D2
medium
residues 83-120_190-226
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mhyD00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.56 | 43.0 | 2.70e-01 | 86.7% | 33.5% |
| 1ckeA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 40.0 | 3.01e-01 | 82.7% | 94.8% |
| 1tgjA00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.54 | 28.0 | 2.50e-01 | 70.7% | 33.0% |
| 3regA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 37.0 | 2.89e-01 | 77.3% | 74.3% |
| 2z5bB01 | 3.30.230.90 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.50 | 34.0 | 2.95e-01 | 70.7% | 80.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3777810 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.65 | 39.0 | 3.55e-01 | 92.0% | 45.0% |
| 3912785 | 110.3.1.1 ↗ | alpha arrays › DEATH domain › SLED domain › SLED domain › SLED | 0.63 | 32.0 | 2.75e-01 | 76.0% | 31.3% |
| 3829044 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.60 | 36.0 | 2.37e-01 | 77.3% | 15.2% |
| 3373297 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.56 | 40.0 | 2.44e-01 | 74.7% | 34.3% |
| 3468641 | 109.4.1.2213 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29032 | 0.55 | 39.0 | 2.78e-01 | 74.7% | 68.5% |
| 3395675 | 223.2.1.20 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 | 0.55 | 43.0 | 3.46e-01 | 85.3% | 56.1% |
| 4311336 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.55 | 40.0 | 2.68e-01 | 80.0% | 83.3% |
| 5001238 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 44.0 | 3.85e-01 | 86.7% | 73.6% |
| 4453177 | 4207.1.2.1 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med7 | 0.54 | 34.0 | 2.84e-01 | 93.3% | 37.6% |
| 3964448 | 304.44.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › PriA_C | 0.54 | 33.0 | 3.14e-01 | 89.3% | 50.0% |
| 4966859 | 304.51.1.8 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6b_C | 0.52 | 33.0 | 3.35e-01 | 70.7% | 62.7% |
| 3807903 | 109.4.1.2208 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif, TPR_24 | 0.52 | 35.0 | 2.12e-01 | 70.7% | 16.7% |
| 4009814 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.51 | 36.0 | 3.92e-01 | 82.7% | 86.2% |
| 5082053 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 35.0 | 2.52e-01 | 74.7% | 94.2% |