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BV_ODV-C42_protein

Euk-Vir

Thysanoplusia_orichalcea_nucleopolyhedrovirus

BV_ODV-C42_protein__YP_007250508__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850

Identity

Accession:
YP_007250508 ↗
Protein ID:
BV_ODV-C42_protein
Kingdom:
euk

Quality

63.1 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Thysanoplusia_orichalcea_nucleopolyhedrovirus

TaxID: 101850

Cluster

View cluster (30 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-61
PDB
Domain cluster: rep: p40__YP_009118533__Condylorrhiza_vestigialis_MNPV__1592576__D3-59
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05815.18 best AcMNPV_Orf101 69.2 4.80e-19 100.0% 15.8%
D2 high residues 116-218
PDB
Domain cluster: rep: P40__YP_009552645__Operophtera_brumata_nucleopolyhedrovirus__1046267__D105-208
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05815.18 best AcMNPV_Orf101 141.5 4.90e-41 100.0% 28.9%
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.61 27.0 3.12e-01 78.6% 53.2%
2x3mA00 1.25.40.670 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 44.0 3.75e-01 85.4% 90.4%
4o6yB00 1.20.120.1770 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 45.0 3.63e-01 90.3% 80.6%
4hfkB00 1.20.120.1620 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 32.0 3.31e-01 82.5% 59.2%
7eq1R01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.54 44.0 3.24e-01 88.3% 61.8%
7ae2A01 1.20.120.580 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like 0.54 39.0 3.63e-01 76.7% 93.4%
3lmfA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.54 36.0 3.54e-01 100.0% 63.3%
1cg5B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 39.0 3.56e-01 77.7% 96.5%
1a00B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 38.0 3.42e-01 75.7% 95.9%
4dmvA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 34.0 3.65e-01 100.0% 78.8%
1binA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 36.0 3.33e-01 72.8% 93.7%
3k3uA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 38.0 3.48e-01 76.7% 94.2%
1w53A00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.52 30.0 3.32e-01 87.4% 70.2%
2zs0A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 38.0 3.52e-01 100.0% 58.6%
1yhuB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 39.0 3.52e-01 100.0% 58.3%
2d2mD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.50 39.0 3.49e-01 100.0% 58.6%
2xrhA00 1.20.120.1430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HP0721 helical bundle 0.50 35.0 3.55e-01 100.0% 74.0%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3395961 613.1.1.1 ↗ alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c 0.61 46.0 3.59e-01 100.0% 36.4%
3370585 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.57 45.0 2.95e-01 86.4% 37.3%
3963181 633.6.1.0 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.55 39.0 2.97e-01 74.8% 59.6%
185784 3368.1.1.1 ↗ alpha bundles › Rap2b (SMA2266) › Rap2b (SMA2266) › Rap2b (SMA2266) › Tai4 0.55 32.0 3.31e-01 82.5% 59.2%
3467405 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 41.0 3.70e-01 100.0% 57.1%
5030079 2002.1.1.60 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.55 41.0 2.65e-01 78.6% 82.6%
3236728 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.54 39.0 3.42e-01 76.7% 81.8%
3709441 109.4.1.17 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin 0.54 40.0 4.18e-01 100.0% 85.3%
3526729 109.6.1.3 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF_N 0.54 40.0 3.46e-01 100.0% 47.4%
3933017 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.54 40.0 3.72e-01 78.6% 93.8%
4974358 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.52 36.0 3.62e-01 70.9% 74.3%
4075843 185.1.1.1 ↗ alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl 0.51 39.0 3.90e-01 100.0% 81.7%
4012743 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.51 37.0 3.19e-01 78.6% 94.4%
4890202 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 35.0 3.46e-01 77.7% 67.3%
D3 high residues 243-336
PDB