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BX571876.1__CAE14777.1__LE1-0072__00072

Bact-Vir

BX571876.1__CAE14777.1__LE1-0072__00072

Identity

Accession:
BX571876 ↗
Kingdom:
phage

Quality

68.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 216-309
PDB
D2 medium residues 1-107
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xw3A01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.69 52.0 5.45e-01 78.5% 94.8%
3fjyA02 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.55 40.0 3.42e-01 75.7% 72.7%
1ws6A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 40.0 3.48e-01 80.4% 82.5%
2k4mA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 38.0 3.44e-01 81.3% 76.5%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5052297 876.1.1.0 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.90 69.0 7.77e-01 82.2% 100.0%
5071270 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.86 66.0 7.31e-01 79.4% 100.0%
3943767 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.84 65.0 7.21e-01 79.4% 100.0%
5073612 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.84 71.0 7.25e-01 89.7% 99.0%
3945776 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.82 66.0 6.94e-01 84.1% 98.9%
3587492 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.82 60.0 6.20e-01 75.7% 85.0%
5052345 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.81 65.0 7.08e-01 85.0% 100.0%
4370861 876.1.1.0 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.81 67.0 6.64e-01 86.9% 100.0%
3280315 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.81 62.0 6.87e-01 80.4% 100.0%
4927766 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.81 56.0 6.24e-01 71.0% 91.8%
5082449 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.81 63.0 6.79e-01 81.3% 100.0%
4946472 876.1.1.0 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.81 56.0 6.37e-01 71.0% 100.0%
4683061 876.1.1.0 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.80 66.0 7.03e-01 86.9% 100.0%
3948471 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.79 66.0 6.50e-01 88.8% 92.2%
4928673 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.79 57.0 6.52e-01 74.8% 100.0%
4344404 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.78 60.0 6.19e-01 80.4% 88.0%
3278076 876.1.1.0 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.73 55.0 5.89e-01 77.6% 100.0%
5057878 876.1.1.1 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.72 56.0 5.11e-01 82.2% 85.6%
4947338 876.1.1.0 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.71 59.0 4.84e-01 88.8% 94.2%
4911555 7563.1.1.6 a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › LSDAT_euk 0.56 42.0 3.48e-01 78.5% 51.1%
3966875 7577.1.1.3 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 0.53 37.0 2.66e-01 72.9% 61.5%
5051916 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.53 35.0 3.37e-01 78.5% 57.7%
3731438 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.53 39.0 3.04e-01 80.4% 60.8%
3729634 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.52 39.0 3.01e-01 80.4% 64.6%
3280396 2493.1.1.5 a/b three-layered sandwiches › MurF and HprK N-domain-like › MurF and HprK N-domain-like › MurF and HprK N-domain-like › PucR 0.51 38.0 3.52e-01 78.5% 83.7%
4991289 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.50 35.0 3.01e-01 71.0% 70.3%
D3 medium residues 108-189
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 47.0 5.16e-01 76.8% 81.8%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.69 51.0 5.23e-01 78.0% 83.5%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 48.0 4.98e-01 91.5% 78.2%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 45.0 4.93e-01 97.6% 84.8%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 39.0 4.89e-01 75.6% 100.0%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 37.0 4.17e-01 73.2% 68.8%
4axsA00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.67 55.0 3.77e-01 90.2% 86.6%
1x2mA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 38.0 4.56e-01 73.2% 87.0%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 44.0 4.24e-01 81.7% 62.1%
6s6hA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 46.0 4.28e-01 95.1% 59.6%
2mw8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 40.0 4.43e-01 78.0% 79.1%
3umcD02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.62 43.0 4.42e-01 72.0% 82.1%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.61 45.0 4.21e-01 78.0% 87.4%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 35.0 4.48e-01 76.8% 100.0%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.61 45.0 3.81e-01 78.0% 81.2%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 39.0 4.08e-01 78.0% 70.7%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 35.0 3.90e-01 76.8% 74.6%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 40.0 4.32e-01 78.0% 83.8%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.59 36.0 4.27e-01 82.9% 100.0%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 32.0 3.46e-01 80.5% 62.7%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.58 40.0 4.28e-01 84.1% 83.1%
6nplA01 1.20.1740.10 Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I 0.58 51.0 3.19e-01 100.0% 79.0%
1j09A05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 43.0 4.05e-01 79.3% 81.6%
4h0eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 37.0 3.94e-01 78.0% 77.1%
1irxA05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 42.0 4.09e-01 82.9% 86.0%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.55 38.0 3.19e-01 100.0% 40.0%
1dw9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.54 39.0 3.89e-01 76.8% 97.7%
1uujA00 1.20.960.30 Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › 0.54 34.0 3.59e-01 87.8% 69.7%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 41.0 3.78e-01 80.5% 93.4%
3juiA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 39.0 3.16e-01 79.3% 63.8%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.53 38.0 3.82e-01 96.3% 74.1%
8b70A01 1.20.1740.10 Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I 0.53 45.0 2.97e-01 100.0% 80.6%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.53 37.0 4.00e-01 96.3% 90.8%
2ix5A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.52 45.0 3.69e-01 98.8% 51.0%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 36.0 4.04e-01 72.0% 100.0%
1qd1B02 3.30.70.670 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain 0.52 37.0 3.15e-01 76.8% 98.6%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 4.30e-01 91.5% 100.0%
6dewA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 45.0 3.45e-01 100.0% 56.3%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3222238 101.1.2.649 alpha arrays › HTH › HTH › winged helix domain › PF28730 0.76 51.0 5.49e-01 73.2% 81.4%
4458965 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.75 47.0 4.80e-01 85.4% 65.0%
4945039 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.74 50.0 5.68e-01 100.0% 95.0%
3283752 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.71 47.0 4.48e-01 76.8% 57.9%
4097436 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 47.0 5.20e-01 78.0% 86.2%
3241028 101.1.2.649 alpha arrays › HTH › HTH › winged helix domain › PF28730 0.68 48.0 4.74e-01 78.0% 70.6%
3278726 101.1.1.282 alpha arrays › HTH › HTH › Three-helical HTH › DUF222 0.65 57.0 5.02e-01 100.0% 66.4%
3963136 3317.1.1.0 alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain 0.65 57.0 4.83e-01 100.0% 60.0%
3323749 101.1.1.298 alpha arrays › HTH › HTH › Three-helical HTH › DUF7645 0.64 41.0 4.71e-01 76.8% 88.3%
3478184 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.64 41.0 3.84e-01 78.0% 53.0%
3398009 101.1.1.112 alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg 0.64 49.0 4.82e-01 81.7% 93.3%
3958582 101.1.1.282 alpha arrays › HTH › HTH › Three-helical HTH › DUF222 0.64 56.0 4.64e-01 100.0% 56.0%
3955872 101.1.2.567 alpha arrays › HTH › HTH › winged helix domain › DUF222 0.63 55.0 4.56e-01 100.0% 57.3%
1780091 4016.1.1.1 alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV 0.60 45.0 3.72e-01 95.1% 42.4%
3826980 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.60 42.0 3.36e-01 100.0% 36.9%
3726746 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.59 40.0 3.32e-01 100.0% 39.3%
3304429 604.9.1.0 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 0.59 37.0 4.05e-01 74.4% 80.0%
4934339 1075.1.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane 0.58 51.0 3.52e-01 100.0% 57.6%
3967683 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.58 47.0 3.92e-01 91.5% 86.7%
3402081 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 44.0 4.35e-01 86.6% 94.4%
3496462 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 40.0 3.76e-01 74.4% 62.0%
3581101 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.56 45.0 3.64e-01 91.5% 73.5%
4169938 3684.1.1.44 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DAHL 0.56 45.0 4.10e-01 91.5% 96.5%
3279822 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.55 40.0 3.60e-01 100.0% 53.3%
4614172 601.7.1.6 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › GlnD_UR_UTase 0.54 42.0 3.68e-01 87.8% 63.7%
5078097 604.1.1.265 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › HepT-like 0.53 38.0 3.38e-01 78.0% 63.8%
3291574 192.29.1.248 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF27150 0.53 41.0 3.72e-01 90.2% 89.6%
4989283 3009.1.1.3 alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Thioredoxin_5 0.53 38.0 2.87e-01 78.0% 30.7%
3631252 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.52 41.0 2.78e-01 89.0% 33.3%
3978419 5058.1.1.2 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st 0.51 38.0 3.30e-01 96.3% 50.0%
3603485 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 39.0 2.46e-01 85.4% 81.9%
3591212 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.50 41.0 3.04e-01 91.5% 49.1%
5082720 633.6.1.1 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 0.50 44.0 3.54e-01 98.8% 96.3%